RNA–Protein interactions for RNA: ENST00000367512.7

EDEM3-202, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EDEM3, Length 6,678 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-202ENST00000367512 DCAF8L2P0C7V8 631 aa22.65■■□□□ 1.22
EDEM3-202ENST00000367512 PELP1Q8IZL8 1130 aaKnown RBP21.75■■□□□ 1.07
EDEM3-202ENST00000367512 EHMT2Q96KQ7 1210 aa21.74■■□□□ 1.07
EDEM3-202ENST00000367512 SUPT5HO00267 1087 aaKnown RBP21.64■■□□□ 1.05
EDEM3-202ENST00000367512 ERICH6Q7L0X2 663 aa21.25■□□□□ 0.99
EDEM3-202ENST00000367512 TTBK1Q5TCY1 1321 aaPredicted RBP21.04■□□□□ 0.96
EDEM3-202ENST00000367512 SHROOM4Q9ULL8 1493 aa20.93■□□□□ 0.94
EDEM3-202ENST00000367512 MYT1Q01538 1121 aa20.81■□□□□ 0.92
EDEM3-202ENST00000367512 APLP2Q06481 763 aa20.81■□□□□ 0.92
EDEM3-202ENST00000367512 CCER1Q8TC90 406 aaPredicted RBP20.78■□□□□ 0.92
EDEM3-202ENST00000367512 PCGF6Q9BYE7 350 aa20.76■□□□□ 0.91
EDEM3-202ENST00000367512 CENPBP07199 599 aaPredicted RBP20.7■□□□□ 0.9
EDEM3-202ENST00000367512 FAM9AQ8IZU1 332 aaPredicted RBP20.66■□□□□ 0.9
EDEM3-202ENST00000367512 YTHDC1Q96MU7 727 aaKnown RBP20.61■□□□□ 0.89
EDEM3-202ENST00000367512 RANGAP1P46060 587 aaPredicted RBP20.51■□□□□ 0.87
EDEM3-202ENST00000367512 NEFLP07196 543 aa20.37■□□□□ 0.85
EDEM3-202ENST00000367512 ATP1B4Q9UN42 357 aaPredicted RBP20.23■□□□□ 0.83
EDEM3-202ENST00000367512 ZEB1P37275 1124 aaPredicted RBP20.1■□□□□ 0.81
EDEM3-202ENST00000367512 DAXXQ9UER7 740 aaPredicted RBP20.06■□□□□ 0.8
EDEM3-202ENST00000367512 PPARGC1BQ86YN6 1023 aaKnown RBP19.97■□□□□ 0.79
EDEM3-202ENST00000367512 CNGB1Q14028 1251 aaPredicted RBP19.88■□□□□ 0.77
EDEM3-202ENST00000367512 POLR3GLQ9BT43 218 aa19.85■□□□□ 0.77
EDEM3-202ENST00000367512 UBTFP17480 764 aaKnown RBP19.75■□□□□ 0.75
EDEM3-202ENST00000367512 TRIM41Q8WV44 630 aa19.73■□□□□ 0.75
EDEM3-202ENST00000367512 CHIC1Q5VXU3 224 aa19.66■□□□□ 0.74
EDEM3-202ENST00000367512 RTL5Q5HYW3 569 aaPredicted RBP19.63■□□□□ 0.73
EDEM3-202ENST00000367512 ZNF316A6NFI3 1004 aaPredicted RBP19.59■□□□□ 0.73
EDEM3-202ENST00000367512 ITGAEP38570 1179 aa19.57■□□□□ 0.72
EDEM3-202ENST00000367512 HRCP23327 699 aa19.53■□□□□ 0.72
EDEM3-202ENST00000367512 CLSPNQ9HAW4 1339 aa19.51■□□□□ 0.71
EDEM3-202ENST00000367512 MYT1LQ9UL68 1186 aa19.45■□□□□ 0.7
EDEM3-202ENST00000367512 SLC4A1APQ9BWU0 796 aaKnown RBP19.41■□□□□ 0.7
EDEM3-202ENST00000367512 BCANQ96GW7 911 aa19.39■□□□□ 0.69
EDEM3-202ENST00000367512 TRIM26Q12899 539 aaPredicted RBP19.32■□□□□ 0.68
EDEM3-202ENST00000367512 HNRNPUL2Q1KMD3 747 aaKnown RBP19.3■□□□□ 0.68
EDEM3-202ENST00000367512 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.25■□□□□ 0.67
EDEM3-202ENST00000367512 BCL11AQ9H165 835 aa19.22■□□□□ 0.67
EDEM3-202ENST00000367512 NISCHQ9Y2I1 1504 aa19.13■□□□□ 0.65
EDEM3-202ENST00000367512 DIEXFQ68CQ4 756 aaKnown RBP19.12■□□□□ 0.65
EDEM3-202ENST00000367512 EIF5BO60841 1220 aaKnown RBP19.1■□□□□ 0.65
EDEM3-202ENST00000367512 GTF3C3Q9Y5Q9 886 aa19.09■□□□□ 0.65
EDEM3-202ENST00000367512 LOC105371045A0A1W2PR82 267 aa19.06■□□□□ 0.64
EDEM3-202ENST00000367512 CDK11AQ9UQ88 783 aaPredicted RBP18.96■□□□□ 0.63
EDEM3-202ENST00000367512 NPM2Q86SE8 214 aaKnown RBP18.88■□□□□ 0.61
EDEM3-202ENST00000367512 SLC24A1O60721 1099 aa18.88■□□□□ 0.61
EDEM3-202ENST00000367512 NEUROD1Q13562 356 aa18.87■□□□□ 0.61
EDEM3-202ENST00000367512 ZBTB47Q9UFB7 747 aaPredicted RBP18.87■□□□□ 0.61
EDEM3-202ENST00000367512 ZNF326Q5BKZ1 582 aaKnown RBP18.79■□□□□ 0.6
EDEM3-202ENST00000367512 CANXP27824 592 aaKnown RBP18.77■□□□□ 0.6
EDEM3-202ENST00000367512 TRIM52Q96A61 297 aa18.76■□□□□ 0.59
EDEM3-202ENST00000367512 FAM50AQ14320 339 aaKnown RBP18.76■□□□□ 0.59
EDEM3-202ENST00000367512 ANP32AP39687 249 aaKnown RBP18.69■□□□□ 0.58
EDEM3-202ENST00000367512 ANP32CO43423 234 aa18.68■□□□□ 0.58
EDEM3-202ENST00000367512 ARXQ96QS3 562 aa18.67■□□□□ 0.58
EDEM3-202ENST00000367512 NBR1Q14596 966 aa18.58■□□□□ 0.56
EDEM3-202ENST00000367512 ANP32BQ92688 251 aaKnown RBP18.56■□□□□ 0.56
EDEM3-202ENST00000367512 GLIPR1L2Q4G1C9 344 aa18.55■□□□□ 0.56
EDEM3-202ENST00000367512 PLPPR3Q6T4P5 718 aa18.53■□□□□ 0.56
EDEM3-202ENST00000367512 HSP90AA1P07900 732 aaKnown RBP18.51■□□□□ 0.55
EDEM3-202ENST00000367512 ACIN1Q9UKV3 1341 aaKnown RBP18.5■□□□□ 0.55
EDEM3-202ENST00000367512 FKBP8Q14318 412 aa18.46■□□□□ 0.55
EDEM3-202ENST00000367512 NEFMP07197 916 aa18.37■□□□□ 0.53
EDEM3-202ENST00000367512 SALL2Q9Y467 1007 aaPredicted RBP18.34■□□□□ 0.53
EDEM3-202ENST00000367512 UPF2Q9HAU5 1272 aaKnown RBP18.25■□□□□ 0.51
EDEM3-202ENST00000367512 ARID3CA6NKF2 412 aa18.23■□□□□ 0.51
EDEM3-202ENST00000367512 FAM9BQ8IZU0 186 aa18.21■□□□□ 0.51
EDEM3-202ENST00000367512 HNRNPUQ00839 825 aaKnown RBP eCLIP18.19■□□□□ 0.5
EDEM3-202ENST00000367512 IRX6P78412 446 aaPredicted RBP18.18■□□□□ 0.5
EDEM3-202ENST00000367512 A0A0G2JS52 829 aa18.12■□□□□ 0.49
EDEM3-202ENST00000367512 CCDC136Q96JN2 1154 aa18.11■□□□□ 0.49
EDEM3-202ENST00000367512 PLEKHG5O94827 1062 aa18.11■□□□□ 0.49
EDEM3-202ENST00000367512 RTN4Q9NQC3 1192 aaKnown RBP18.1■□□□□ 0.49
EDEM3-202ENST00000367512 TPRNQ4KMQ1 711 aa18.08■□□□□ 0.49
EDEM3-202ENST00000367512 CDK11BP21127 795 aaKnown RBP18.05■□□□□ 0.48
EDEM3-202ENST00000367512 P3H3Q8IVL6 736 aa18.05■□□□□ 0.48
EDEM3-202ENST00000367512 FBLN2P98095 1184 aa18.04■□□□□ 0.48
EDEM3-202ENST00000367512 DDX10Q13206 875 aaKnown RBP18.04■□□□□ 0.48
EDEM3-202ENST00000367512 AMER1Q5JTC6 1135 aaPredicted RBP18.04■□□□□ 0.48
EDEM3-202ENST00000367512 ZNF777Q9ULD5 760 aaPredicted RBP18.02■□□□□ 0.48
EDEM3-202ENST00000367512 TRIM44Q96DX7 344 aaPredicted RBP18■□□□□ 0.47
EDEM3-202ENST00000367512 CHGAP10645 457 aaKnown RBP17.98■□□□□ 0.47
EDEM3-202ENST00000367512 TULP1O00294 542 aaPredicted RBP17.96■□□□□ 0.47
EDEM3-202ENST00000367512 SCAF1Q9H7N4 1312 aaKnown RBP17.96■□□□□ 0.47
EDEM3-202ENST00000367512 NCLP19338 710 aaKnown RBP17.96■□□□□ 0.47
EDEM3-202ENST00000367512 SENP3-EIF4A1A0A087X0R7 540 aa17.95■□□□□ 0.46
EDEM3-202ENST00000367512 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.95■□□□□ 0.46
EDEM3-202ENST00000367512 SENP3Q9H4L4 574 aaPredicted RBP17.95■□□□□ 0.46
EDEM3-202ENST00000367512 TNNT2P45379 298 aaPredicted RBP17.94■□□□□ 0.46
EDEM3-202ENST00000367512 DNTTIP2Q5QJE6 756 aaKnown RBP17.91■□□□□ 0.46
EDEM3-202ENST00000367512 NAP1L5Q96NT1 182 aaPredicted RBP17.91■□□□□ 0.46
EDEM3-202ENST00000367512 PTMAP06454 111 aaKnown RBP17.89■□□□□ 0.45
EDEM3-202ENST00000367512 TMC1Q8TDI8 760 aa17.87■□□□□ 0.45
EDEM3-202ENST00000367512 NCBP3Q53F19 620 aaKnown RBP17.86■□□□□ 0.45
EDEM3-202ENST00000367512 HIRIP3Q9BW71 556 aaPredicted RBP17.84■□□□□ 0.45
EDEM3-202ENST00000367512 TAOK2Q9UL54 1235 aa17.83■□□□□ 0.44
EDEM3-202ENST00000367512 STAG3Q9UJ98 1225 aa17.82■□□□□ 0.44
EDEM3-202ENST00000367512 WDR43Q15061 677 aaKnown RBP eCLIP17.81■□□□□ 0.44
EDEM3-202ENST00000367512 TONSLQ96HA7 1378 aa17.81■□□□□ 0.44
EDEM3-202ENST00000367512 LAS1LQ9Y4W2 734 aaKnown RBP17.8■□□□□ 0.44
EDEM3-202ENST00000367512 MRS2Q9HD23 443 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms