RNA–Protein interactions for RNA: ENST00000496101.5

GCOM1-211, Transcript of GRINL1A complex locus 1, humanhuman

TSL 1 (best)

Gene GCOM1, Length 2,032 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCOM1-211ENST00000496101 NISCHQ9Y2I1 1504 aa38.06■■■■□ 3.68
GCOM1-211ENST00000496101 CCDC180Q9P1Z9 1646 aa32.61■■■□□ 2.81
GCOM1-211ENST00000496101 ZCCHC6Q5VYS8 1495 aaKnown RBP32.26■■■□□ 2.75
GCOM1-211ENST00000496101 SHROOM4Q9ULL8 1493 aa31.98■■■□□ 2.71
GCOM1-211ENST00000496101 DCAF1Q9Y4B6 1507 aa31.47■■■□□ 2.63
GCOM1-211ENST00000496101 SUPT5HO00267 1087 aaKnown RBP31.37■■■□□ 2.61
GCOM1-211ENST00000496101 DCAF8L2P0C7V8 631 aa30.97■■■□□ 2.55
GCOM1-211ENST00000496101 CHIC1Q5VXU3 224 aa30.72■■■□□ 2.51
GCOM1-211ENST00000496101 MYO15BQ96JP2 1530 aa30.61■■■□□ 2.49
GCOM1-211ENST00000496101 ABCC9O60706 1549 aa30.47■■■□□ 2.47
GCOM1-211ENST00000496101 SCRIBQ14160 1630 aa30.2■■■□□ 2.42
GCOM1-211ENST00000496101 NACADO15069 1562 aa30.04■■■□□ 2.4
GCOM1-211ENST00000496101 RSF1Q96T23 1441 aaPredicted RBP30.03■■■□□ 2.4
GCOM1-211ENST00000496101 RB1CC1Q8TDY2 1594 aa29.85■■■□□ 2.37
GCOM1-211ENST00000496101 HRCP23327 699 aa29.84■■■□□ 2.37
GCOM1-211ENST00000496101 PCGF6Q9BYE7 350 aa29.61■■■□□ 2.33
GCOM1-211ENST00000496101 LOC105371045A0A1W2PR82 267 aa29.59■■■□□ 2.33
GCOM1-211ENST00000496101 CECR2Q9BXF3 1484 aa29.5■■■□□ 2.31
GCOM1-211ENST00000496101 MROH2BQ7Z745 1585 aa29.49■■■□□ 2.31
GCOM1-211ENST00000496101 TRIM41Q8WV44 630 aa29.38■■■□□ 2.29
GCOM1-211ENST00000496101 BAZ1AQ9NRL2 1556 aaPredicted RBP29.34■■■□□ 2.29
GCOM1-211ENST00000496101 WIZO95785 1651 aa29.34■■■□□ 2.29
GCOM1-211ENST00000496101 TRIM26Q12899 539 aaPredicted RBP29.28■■■□□ 2.28
GCOM1-211ENST00000496101 EIF4G1Q04637 1599 aaKnown RBP29.16■■■□□ 2.26
GCOM1-211ENST00000496101 UNC13AQ9UPW8 1703 aa29.04■■■□□ 2.24
GCOM1-211ENST00000496101 TOP2AP11388 1531 aaKnown RBP29.03■■■□□ 2.24
GCOM1-211ENST00000496101 SMARCA4P51532 1647 aa29.02■■■□□ 2.24
GCOM1-211ENST00000496101 PPARGC1BQ86YN6 1023 aaKnown RBP28.92■■■□□ 2.22
GCOM1-211ENST00000496101 FAM9AQ8IZU1 332 aaPredicted RBP28.91■■■□□ 2.22
GCOM1-211ENST00000496101 SMARCA2P51531 1590 aa28.82■■■□□ 2.2
GCOM1-211ENST00000496101 ZEB1P37275 1124 aaPredicted RBP28.79■■■□□ 2.2
GCOM1-211ENST00000496101 CCDC88BA6NC98 1476 aa28.75■■■□□ 2.19
GCOM1-211ENST00000496101 BICRAQ9NZM4 1560 aa28.62■■■□□ 2.17
GCOM1-211ENST00000496101 PEG3Q9GZU2 1588 aa28.6■■■□□ 2.17
GCOM1-211ENST00000496101 ABCC8Q09428 1581 aa28.59■■■□□ 2.17
GCOM1-211ENST00000496101 EEA1Q15075 1411 aa28.49■■■□□ 2.15
GCOM1-211ENST00000496101 EHMT2Q96KQ7 1210 aa28.45■■■□□ 2.15
GCOM1-211ENST00000496101 WRNQ14191 1432 aaPredicted RBP eCLIP28.43■■■□□ 2.14
GCOM1-211ENST00000496101 TNIKQ9UKE5 1360 aa28.32■■■□□ 2.12
GCOM1-211ENST00000496101 SOGA1O94964 1423 aa28.3■■■□□ 2.12
GCOM1-211ENST00000496101 CEP162Q5TB80 1403 aa28.28■■■□□ 2.12
GCOM1-211ENST00000496101 PABPN1Q86U42 306 aaKnown RBP eCLIP28.23■■■□□ 2.11
GCOM1-211ENST00000496101 ATAD2BQ9ULI0 1458 aa28.19■■■□□ 2.1
GCOM1-211ENST00000496101 CSRNP3Q8WYN3 585 aa28.18■■■□□ 2.1
GCOM1-211ENST00000496101 GOLGA3Q08378 1498 aa28.18■■■□□ 2.1
GCOM1-211ENST00000496101 RUSC2Q8N2Y8 1516 aa28.14■■■□□ 2.09
GCOM1-211ENST00000496101 BAZ1BQ9UIG0 1483 aaKnown RBP28.11■■■□□ 2.09
GCOM1-211ENST00000496101 SYNJ1O43426 1573 aa28.1■■■□□ 2.09
GCOM1-211ENST00000496101 KIF21BO75037 1637 aa28.1■■■□□ 2.09
GCOM1-211ENST00000496101 CEP164Q9UPV0 1460 aa28.03■■■□□ 2.08
GCOM1-211ENST00000496101 UBTFP17480 764 aaKnown RBP27.92■■■□□ 2.06
GCOM1-211ENST00000496101 CCER1Q8TC90 406 aaPredicted RBP27.9■■■□□ 2.06
GCOM1-211ENST00000496101 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.87■■■□□ 2.05
GCOM1-211ENST00000496101 TOP2BQ02880 1626 aa27.87■■■□□ 2.05
GCOM1-211ENST00000496101 BIVM-ERCC5R4GMW8 1640 aa27.84■■■□□ 2.05
GCOM1-211ENST00000496101 HMGXB3Q12766 1538 aa27.81■■■□□ 2.04
GCOM1-211ENST00000496101 CLIP1P30622 1438 aa27.75■■■□□ 2.03
GCOM1-211ENST00000496101 NCAPD3P42695 1498 aa27.71■■■□□ 2.03
GCOM1-211ENST00000496101 VPS8Q8N3P4 1428 aa27.71■■■□□ 2.03
GCOM1-211ENST00000496101 RAPGEF2Q9Y4G8 1499 aa27.67■■■□□ 2.02
GCOM1-211ENST00000496101 ERICH3Q5RHP9 1530 aa27.65■■■□□ 2.02
GCOM1-211ENST00000496101 TTBK1Q5TCY1 1321 aaPredicted RBP27.61■■■□□ 2.01
GCOM1-211ENST00000496101 PRXQ9BXM0 1461 aa27.54■■■□□ 2
GCOM1-211ENST00000496101 CUX1P39880 1505 aa27.49■■□□□ 1.99
GCOM1-211ENST00000496101 PRDM2Q13029 1718 aa27.48■■□□□ 1.99
GCOM1-211ENST00000496101 CFTRP13569 1480 aa27.47■■□□□ 1.99
GCOM1-211ENST00000496101 APLP2Q06481 763 aa27.4■■□□□ 1.98
GCOM1-211ENST00000496101 DIEXFQ68CQ4 756 aaKnown RBP27.39■■□□□ 1.98
GCOM1-211ENST00000496101 KIF27Q86VH2 1401 aa27.37■■□□□ 1.97
GCOM1-211ENST00000496101 SCAF1Q9H7N4 1312 aaKnown RBP27.37■■□□□ 1.97
GCOM1-211ENST00000496101 ARAP1Q96P48 1450 aa27.35■■□□□ 1.97
GCOM1-211ENST00000496101 ZNF316A6NFI3 1004 aaPredicted RBP27.27■■□□□ 1.96
GCOM1-211ENST00000496101 HNRNPUL2Q1KMD3 747 aaKnown RBP27.24■■□□□ 1.95
GCOM1-211ENST00000496101 ACIN1Q9UKV3 1341 aaKnown RBP27.23■■□□□ 1.95
GCOM1-211ENST00000496101 DNAJC5BQ9UF47 199 aa27.21■■□□□ 1.95
GCOM1-211ENST00000496101 CENPBP07199 599 aaPredicted RBP27.14■■□□□ 1.93
GCOM1-211ENST00000496101 CLSPNQ9HAW4 1339 aa27.14■■□□□ 1.93
GCOM1-211ENST00000496101 PELP1Q8IZL8 1130 aaKnown RBP27.11■■□□□ 1.93
GCOM1-211ENST00000496101 RRBP1Q9P2E9 1410 aaKnown RBP27.11■■□□□ 1.93
GCOM1-211ENST00000496101 ARHGAP35Q9NRY4 1499 aa27.1■■□□□ 1.93
GCOM1-211ENST00000496101 RANGAP1P46060 587 aaPredicted RBP27.09■■□□□ 1.93
GCOM1-211ENST00000496101 CADPSQ9ULU8 1353 aa27.08■■□□□ 1.93
GCOM1-211ENST00000496101 NEUROD1Q13562 356 aa27.07■■□□□ 1.92
GCOM1-211ENST00000496101 CUX2O14529 1486 aa27.03■■□□□ 1.92
GCOM1-211ENST00000496101 MAP3K1Q13233 1512 aa27.02■■□□□ 1.92
GCOM1-211ENST00000496101 IGF1RP08069 1367 aa27■■□□□ 1.91
GCOM1-211ENST00000496101 KANK4Q5T7N3 995 aaPredicted RBP26.99■■□□□ 1.91
GCOM1-211ENST00000496101 DHX57Q6P158 1386 aaKnown RBP26.97■■□□□ 1.91
GCOM1-211ENST00000496101 FGD5Q6ZNL6 1462 aa26.97■■□□□ 1.91
GCOM1-211ENST00000496101 CC2D2AQ9P2K1 1620 aa26.91■■□□□ 1.9
GCOM1-211ENST00000496101 TIAM1Q13009 1591 aa26.9■■□□□ 1.9
GCOM1-211ENST00000496101 CCNB3Q8WWL7 1395 aa26.89■■□□□ 1.89
GCOM1-211ENST00000496101 CARMIL1Q5VZK9 1371 aa26.88■■□□□ 1.89
GCOM1-211ENST00000496101 DNMBPQ6XZF7 1577 aa26.84■■□□□ 1.89
GCOM1-211ENST00000496101 FANCD2Q9BXW9 1451 aa26.82■■□□□ 1.88
GCOM1-211ENST00000496101 CFAP43Q8NDM7 1665 aa26.8■■□□□ 1.88
GCOM1-211ENST00000496101 GTF3C3Q9Y5Q9 886 aa26.79■■□□□ 1.88
GCOM1-211ENST00000496101 FHAD1B1AJZ9 1412 aa26.77■■□□□ 1.88
GCOM1-211ENST00000496101 ABCA10Q8WWZ4 1543 aa26.76■■□□□ 1.87
GCOM1-211ENST00000496101 MIER1Q8N108 512 aa26.75■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms