RNA–Protein interactions for RNA: ENST00000484767.5

SND1-211, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-211ENST00000484767 AEBP2Q6ZN18 517 aaPredicted RBP19.63■□□□□ 0.73
SND1-211ENST00000484767 CHIC1Q5VXU3 224 aa19.06■□□□□ 0.64
SND1-211ENST00000484767 NISCHQ9Y2I1 1504 aa18.79■□□□□ 0.6
SND1-211ENST00000484767 PHF23Q9BUL5 403 aaPredicted RBP16.77■□□□□ 0.28
SND1-211ENST00000484767 SENP3Q9H4L4 574 aaPredicted RBP16.63■□□□□ 0.25
SND1-211ENST00000484767 CCDC180Q9P1Z9 1646 aa16.16■□□□□ 0.18
SND1-211ENST00000484767 ZCCHC6Q5VYS8 1495 aaKnown RBP15.96■□□□□ 0.14
SND1-211ENST00000484767 SHROOM4Q9ULL8 1493 aa15.7■□□□□ 0.1
SND1-211ENST00000484767 DCAF1Q9Y4B6 1507 aa15.63■□□□□ 0.09
SND1-211ENST00000484767 SUPT5HO00267 1087 aaKnown RBP15.49■□□□□ 0.07
SND1-211ENST00000484767 FOXD1Q16676 465 aa15.47■□□□□ 0.07
SND1-211ENST00000484767 PLPPR3Q6T4P5 718 aa15.4■□□□□ 0.06
SND1-211ENST00000484767 MYO15BQ96JP2 1530 aa15.26■□□□□ 0.03
SND1-211ENST00000484767 HRCP23327 699 aa15.17■□□□□ 0.02
SND1-211ENST00000484767 ABCC9O60706 1549 aa15.16■□□□□ 0.02
SND1-211ENST00000484767 DCAF8L2P0C7V8 631 aa15.06■□□□□ 0
SND1-211ENST00000484767 DNAJC5BQ9UF47 199 aa14.87□□□□□ -0.03
SND1-211ENST00000484767 PCGF6Q9BYE7 350 aa14.86□□□□□ -0.03
SND1-211ENST00000484767 RB1CC1Q8TDY2 1594 aa14.85□□□□□ -0.03
SND1-211ENST00000484767 RSF1Q96T23 1441 aaPredicted RBP14.83□□□□□ -0.04
SND1-211ENST00000484767 SCRIBQ14160 1630 aa14.81□□□□□ -0.04
SND1-211ENST00000484767 PPP6R1Q9UPN7 881 aa14.81□□□□□ -0.04
SND1-211ENST00000484767 NACADO15069 1562 aa14.81□□□□□ -0.04
SND1-211ENST00000484767 TRIM26Q12899 539 aaPredicted RBP14.77□□□□□ -0.05
SND1-211ENST00000484767 ADRA2BP18089 450 aa14.76□□□□□ -0.05
SND1-211ENST00000484767 LOC105371045A0A1W2PR82 267 aa14.68□□□□□ -0.06
SND1-211ENST00000484767 ZEB1P37275 1124 aaPredicted RBP14.68□□□□□ -0.06
SND1-211ENST00000484767 TRIM41Q8WV44 630 aa14.57□□□□□ -0.08
SND1-211ENST00000484767 BAZ1AQ9NRL2 1556 aaPredicted RBP14.56□□□□□ -0.08
SND1-211ENST00000484767 PPARGC1BQ86YN6 1023 aaKnown RBP14.53□□□□□ -0.08
SND1-211ENST00000484767 PIAS4Q8N2W9 510 aaPredicted RBP14.52□□□□□ -0.09
SND1-211ENST00000484767 MROH2BQ7Z745 1585 aa14.51□□□□□ -0.09
SND1-211ENST00000484767 EIF4G1Q04637 1599 aaKnown RBP14.49□□□□□ -0.09
SND1-211ENST00000484767 WIZO95785 1651 aa14.47□□□□□ -0.09
SND1-211ENST00000484767 CECR2Q9BXF3 1484 aa14.46□□□□□ -0.09
SND1-211ENST00000484767 TOP2AP11388 1531 aaKnown RBP14.38□□□□□ -0.11
SND1-211ENST00000484767 SMARCA4P51532 1647 aa14.32□□□□□ -0.12
SND1-211ENST00000484767 WRNQ14191 1432 aaPredicted RBP eCLIP14.27□□□□□ -0.129e-6■■■■■ 50.1
SND1-211ENST00000484767 MSH5O43196 834 aa14.27□□□□□ -0.13
SND1-211ENST00000484767 UNC13AQ9UPW8 1703 aa14.27□□□□□ -0.13
SND1-211ENST00000484767 EEA1Q15075 1411 aa14.25□□□□□ -0.13
SND1-211ENST00000484767 SMARCA2P51531 1590 aa14.25□□□□□ -0.13
SND1-211ENST00000484767 FAM9AQ8IZU1 332 aaPredicted RBP14.24□□□□□ -0.13
SND1-211ENST00000484767 PELP1Q8IZL8 1130 aaKnown RBP14.23□□□□□ -0.13
SND1-211ENST00000484767 CCDC88BA6NC98 1476 aa14.18□□□□□ -0.14
SND1-211ENST00000484767 PEG3Q9GZU2 1588 aa14.14□□□□□ -0.15
SND1-211ENST00000484767 TNIKQ9UKE5 1360 aa14.14□□□□□ -0.15
SND1-211ENST00000484767 DNAJC5Q9H3Z4 198 aa14.13□□□□□ -0.15
SND1-211ENST00000484767 ABCC8Q09428 1581 aa14.1□□□□□ -0.15
SND1-211ENST00000484767 CEP162Q5TB80 1403 aa14.07□□□□□ -0.16
SND1-211ENST00000484767 PABPN1Q86U42 306 aaKnown RBP eCLIP14.05□□□□□ -0.16
SND1-211ENST00000484767 GOLGA3Q08378 1498 aa14.04□□□□□ -0.16
SND1-211ENST00000484767 KIF21BO75037 1637 aa14.04□□□□□ -0.16
SND1-211ENST00000484767 CCER1Q8TC90 406 aaPredicted RBP14□□□□□ -0.17
SND1-211ENST00000484767 BICRAQ9NZM4 1560 aa14□□□□□ -0.17
SND1-211ENST00000484767 CSRNP3Q8WYN3 585 aa13.97□□□□□ -0.17
SND1-211ENST00000484767 SOGA1O94964 1423 aa13.97□□□□□ -0.17
SND1-211ENST00000484767 CEP164Q9UPV0 1460 aa13.96□□□□□ -0.17
SND1-211ENST00000484767 BAZ1BQ9UIG0 1483 aaKnown RBP13.95□□□□□ -0.18
SND1-211ENST00000484767 SCAF1Q9H7N4 1312 aaKnown RBP13.94□□□□□ -0.18
SND1-211ENST00000484767 EHMT2Q96KQ7 1210 aa13.93□□□□□ -0.18
SND1-211ENST00000484767 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.91□□□□□ -0.18
SND1-211ENST00000484767 ACIN1Q9UKV3 1341 aaKnown RBP13.89□□□□□ -0.19
SND1-211ENST00000484767 CENPBP07199 599 aaPredicted RBP13.88□□□□□ -0.19
SND1-211ENST00000484767 SYNJ1O43426 1573 aa13.88□□□□□ -0.19
SND1-211ENST00000484767 RUSC2Q8N2Y8 1516 aa13.86□□□□□ -0.19
SND1-211ENST00000484767 DIEXFQ68CQ4 756 aaKnown RBP13.84□□□□□ -0.19
SND1-211ENST00000484767 BIVM-ERCC5R4GMW8 1640 aa13.83□□□□□ -0.2
SND1-211ENST00000484767 ATAD2BQ9ULI0 1458 aa13.83□□□□□ -0.2
SND1-211ENST00000484767 VPS8Q8N3P4 1428 aa13.82□□□□□ -0.2
SND1-211ENST00000484767 UBTFP17480 764 aaKnown RBP13.82□□□□□ -0.2
SND1-211ENST00000484767 TOP2BQ02880 1626 aa13.82□□□□□ -0.2
SND1-211ENST00000484767 CLIP1P30622 1438 aa13.8□□□□□ -0.2
SND1-211ENST00000484767 ERICH3Q5RHP9 1530 aa13.8□□□□□ -0.2
SND1-211ENST00000484767 ZNF316A6NFI3 1004 aaPredicted RBP13.78□□□□□ -0.2
SND1-211ENST00000484767 CLSPNQ9HAW4 1339 aa13.72□□□□□ -0.21
SND1-211ENST00000484767 NEUROD1Q13562 356 aa13.72□□□□□ -0.21
SND1-211ENST00000484767 HMGXB3Q12766 1538 aa13.71□□□□□ -0.21
SND1-211ENST00000484767 RAPGEF2Q9Y4G8 1499 aa13.67□□□□□ -0.22
SND1-211ENST00000484767 PRDM2Q13029 1718 aa13.67□□□□□ -0.22
SND1-211ENST00000484767 MYT1Q01538 1121 aa13.67□□□□□ -0.22
SND1-211ENST00000484767 APLP2Q06481 763 aa13.67□□□□□ -0.22
SND1-211ENST00000484767 PRXQ9BXM0 1461 aa13.65□□□□□ -0.22
SND1-211ENST00000484767 CC2D2AQ9P2K1 1620 aa13.63□□□□□ -0.23
SND1-211ENST00000484767 GTF3C3Q9Y5Q9 886 aa13.62□□□□□ -0.23
SND1-211ENST00000484767 NCAPD3P42695 1498 aa13.61□□□□□ -0.23
SND1-211ENST00000484767 POTEDQ86YR6 584 aa13.6□□□□□ -0.23
SND1-211ENST00000484767 CUX2O14529 1486 aa13.58□□□□□ -0.24
SND1-211ENST00000484767 TTBK1Q5TCY1 1321 aaPredicted RBP13.58□□□□□ -0.24
SND1-211ENST00000484767 ARAP1Q96P48 1450 aa13.57□□□□□ -0.24
SND1-211ENST00000484767 PPP4R3CPQ6ZMV5 832 aa13.56□□□□□ -0.24
SND1-211ENST00000484767 RRBP1Q9P2E9 1410 aaKnown RBP13.56□□□□□ -0.24
SND1-211ENST00000484767 KIF27Q86VH2 1401 aa13.55□□□□□ -0.24
SND1-211ENST00000484767 MAP3K1Q13233 1512 aa13.54□□□□□ -0.24
SND1-211ENST00000484767 HNRNPUL2Q1KMD3 747 aaKnown RBP13.53□□□□□ -0.24
SND1-211ENST00000484767 CUX1P39880 1505 aa13.53□□□□□ -0.24
SND1-211ENST00000484767 CFTRP13569 1480 aa13.5□□□□□ -0.25
SND1-211ENST00000484767 DHX57Q6P158 1386 aaKnown RBP13.49□□□□□ -0.25
SND1-211ENST00000484767 MIER1Q8N108 512 aa13.45□□□□□ -0.26
SND1-211ENST00000484767 ARHGAP35Q9NRY4 1499 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms