RNA–Protein interactions for RNA: ENST00000439272.6

GNB1-204, Transcript of G protein subunit beta 1, humanhuman

TSL 5

Gene GNB1, Length 602 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNB1-204ENST00000439272 AEBP2Q6ZN18 517 aaPredicted RBP23.26■■□□□ 1.31
GNB1-204ENST00000439272 NISCHQ9Y2I1 1504 aa23.06■■□□□ 1.28
GNB1-204ENST00000439272 CHIC1Q5VXU3 224 aa22.6■■□□□ 1.21
GNB1-204ENST00000439272 CCDC180Q9P1Z9 1646 aa20.56■□□□□ 0.88
GNB1-204ENST00000439272 ABCC9O60706 1549 aa19.94■□□□□ 0.78
GNB1-204ENST00000439272 PHF23Q9BUL5 403 aaPredicted RBP19.94■□□□□ 0.78
GNB1-204ENST00000439272 SENP3Q9H4L4 574 aaPredicted RBP19.59■□□□□ 0.73
GNB1-204ENST00000439272 RB1CC1Q8TDY2 1594 aa19.26■□□□□ 0.67
GNB1-204ENST00000439272 NACADO15069 1562 aa19.24■□□□□ 0.67
GNB1-204ENST00000439272 ZCCHC6Q5VYS8 1495 aaKnown RBP19.22■□□□□ 0.67
GNB1-204ENST00000439272 DCAF8L2P0C7V8 631 aa19.22■□□□□ 0.67
GNB1-204ENST00000439272 MYO15BQ96JP2 1530 aa19.1■□□□□ 0.65
GNB1-204ENST00000439272 DCAF1Q9Y4B6 1507 aa19.07■□□□□ 0.64
GNB1-204ENST00000439272 UNC13AQ9UPW8 1703 aa18.99■□□□□ 0.63
GNB1-204ENST00000439272 SCRIBQ14160 1630 aa18.75■□□□□ 0.59
GNB1-204ENST00000439272 BICRAQ9NZM4 1560 aa18.66■□□□□ 0.58
GNB1-204ENST00000439272 PABPN1Q86U42 306 aaKnown RBP eCLIP18.61■□□□□ 0.579e-8■■□□□ 11.5
GNB1-204ENST00000439272 SHROOM4Q9ULL8 1493 aa18.43■□□□□ 0.54
GNB1-204ENST00000439272 FOXD1Q16676 465 aa18.27■□□□□ 0.52
GNB1-204ENST00000439272 PLPPR3Q6T4P5 718 aa18.24■□□□□ 0.51
GNB1-204ENST00000439272 EIF4G1Q04637 1599 aaKnown RBP18.17■□□□□ 0.5
GNB1-204ENST00000439272 DNAJC5BQ9UF47 199 aa18.14■□□□□ 0.49
GNB1-204ENST00000439272 CC2D2AQ9P2K1 1620 aa18.09■□□□□ 0.49
GNB1-204ENST00000439272 CECR2Q9BXF3 1484 aa17.94■□□□□ 0.46
GNB1-204ENST00000439272 SMARCA4P51532 1647 aa17.93■□□□□ 0.46
GNB1-204ENST00000439272 BAZ1AQ9NRL2 1556 aaPredicted RBP17.89■□□□□ 0.45
GNB1-204ENST00000439272 MROH2BQ7Z745 1585 aa17.78■□□□□ 0.44
GNB1-204ENST00000439272 SMARCA2P51531 1590 aa17.76■□□□□ 0.43
GNB1-204ENST00000439272 ATAD2BQ9ULI0 1458 aa17.73■□□□□ 0.43
GNB1-204ENST00000439272 PEG3Q9GZU2 1588 aa17.71■□□□□ 0.43
GNB1-204ENST00000439272 NCAPD3P42695 1498 aa17.69■□□□□ 0.42
GNB1-204ENST00000439272 WIZO95785 1651 aa17.67■□□□□ 0.42
GNB1-204ENST00000439272 HMGXB3Q12766 1538 aa17.67■□□□□ 0.42
GNB1-204ENST00000439272 BAZ1BQ9UIG0 1483 aaKnown RBP17.63■□□□□ 0.41
GNB1-204ENST00000439272 PPP6R1Q9UPN7 881 aa17.6■□□□□ 0.41
GNB1-204ENST00000439272 RSF1Q96T23 1441 aaPredicted RBP17.57■□□□□ 0.4
GNB1-204ENST00000439272 ADRA2BP18089 450 aa17.5■□□□□ 0.39
GNB1-204ENST00000439272 TOP2AP11388 1531 aaKnown RBP17.43■□□□□ 0.38
GNB1-204ENST00000439272 NESP48681 1621 aa17.29■□□□□ 0.36
GNB1-204ENST00000439272 LAMC3Q9Y6N6 1575 aa17.28■□□□□ 0.36
GNB1-204ENST00000439272 PRDM2Q13029 1718 aa17.23■□□□□ 0.35
GNB1-204ENST00000439272 KIF21AQ7Z4S6 1674 aa17.22■□□□□ 0.35
GNB1-204ENST00000439272 SUPT5HO00267 1087 aaKnown RBP17.21■□□□□ 0.35
GNB1-204ENST00000439272 ERCC6Q03468 1493 aa17.19■□□□□ 0.34
GNB1-204ENST00000439272 CCDC88BA6NC98 1476 aa17.18■□□□□ 0.34
GNB1-204ENST00000439272 CADPSQ9ULU8 1353 aa17.17■□□□□ 0.34
GNB1-204ENST00000439272 PIAS4Q8N2W9 510 aaPredicted RBP17.11■□□□□ 0.33
GNB1-204ENST00000439272 PDS5BQ9NTI5 1447 aa17.11■□□□□ 0.33
GNB1-204ENST00000439272 CFTRP13569 1480 aa17.11■□□□□ 0.33
GNB1-204ENST00000439272 THOC2Q8NI27 1593 aaKnown RBP17.05■□□□□ 0.32
GNB1-204ENST00000439272 FANCD2Q9BXW9 1451 aa17.02■□□□□ 0.32
GNB1-204ENST00000439272 CEP164Q9UPV0 1460 aa17■□□□□ 0.31
GNB1-204ENST00000439272 CUX2O14529 1486 aa16.95■□□□□ 0.3
GNB1-204ENST00000439272 MRC2Q9UBG0 1479 aa16.95■□□□□ 0.3
GNB1-204ENST00000439272 WDR62O43379 1518 aa16.91■□□□□ 0.3
GNB1-204ENST00000439272 URB2Q14146 1524 aaKnown RBP16.85■□□□□ 0.29
GNB1-204ENST00000439272 DNMBPQ6XZF7 1577 aa16.78■□□□□ 0.28
GNB1-204ENST00000439272 ABCC8Q09428 1581 aa16.77■□□□□ 0.27
GNB1-204ENST00000439272 TOPBP1Q92547 1522 aa16.76■□□□□ 0.27
GNB1-204ENST00000439272 MSH5O43196 834 aa16.75■□□□□ 0.27
GNB1-204ENST00000439272 CUX1P39880 1505 aa16.68■□□□□ 0.26
GNB1-204ENST00000439272 BIVM-ERCC5R4GMW8 1640 aa16.63■□□□□ 0.25
GNB1-204ENST00000439272 POLA1P09884 1462 aaPredicted RBP16.62■□□□□ 0.25
GNB1-204ENST00000439272 IFT140Q96RY7 1462 aa16.62■□□□□ 0.25
GNB1-204ENST00000439272 TARBP1Q13395 1621 aaKnown RBP16.62■□□□□ 0.25
GNB1-204ENST00000439272 FGD5Q6ZNL6 1462 aa16.61■□□□□ 0.25
GNB1-204ENST00000439272 SYNJ1O43426 1573 aa16.6■□□□□ 0.25
GNB1-204ENST00000439272 TOP2BQ02880 1626 aa16.59■□□□□ 0.25
GNB1-204ENST00000439272 WRNQ14191 1432 aaPredicted RBP eCLIP16.58■□□□□ 0.244e-6■□□□□ 10.4
GNB1-204ENST00000439272 WDR97A6NE52 1622 aa16.56■□□□□ 0.24
GNB1-204ENST00000439272 EIF4G3O43432 1585 aaKnown RBP16.55■□□□□ 0.24
GNB1-204ENST00000439272 RAD54L2Q9Y4B4 1467 aa16.54■□□□□ 0.24
GNB1-204ENST00000439272 ZNF608Q9ULD9 1512 aaPredicted RBP16.54■□□□□ 0.24
GNB1-204ENST00000439272 SOGA1O94964 1423 aa16.53■□□□□ 0.24
GNB1-204ENST00000439272 PBRM1Q86U86 1689 aa16.47■□□□□ 0.23
GNB1-204ENST00000439272 AQRO60306 1485 aaKnown RBP eCLIP16.45■□□□□ 0.229e-8■■■■□ 23.2
GNB1-204ENST00000439272 ABCA10Q8WWZ4 1543 aa16.43■□□□□ 0.22
GNB1-204ENST00000439272 TDRD9Q8NDG6 1382 aaKnown RBP16.42■□□□□ 0.22
GNB1-204ENST00000439272 CHD1O14646 1710 aa16.42■□□□□ 0.22
GNB1-204ENST00000439272 ABCA5Q8WWZ7 1642 aa16.41■□□□□ 0.22
GNB1-204ENST00000439272 GAPVD1Q14C86 1478 aa16.37■□□□□ 0.21
GNB1-204ENST00000439272 GRIN2BQ13224 1484 aa16.35■□□□□ 0.21
GNB1-204ENST00000439272 SNAPC4Q5SXM2 1469 aa16.33■□□□□ 0.2
GNB1-204ENST00000439272 MAGI1Q96QZ7 1491 aaPredicted RBP16.3■□□□□ 0.2
GNB1-204ENST00000439272 DNAJC5Q9H3Z4 198 aa16.28■□□□□ 0.2
GNB1-204ENST00000439272 ADAMTS12P58397 1594 aa16.26■□□□□ 0.19
GNB1-204ENST00000439272 ERICH3Q5RHP9 1530 aa16.25■□□□□ 0.19
GNB1-204ENST00000439272 FBLN2P98095 1184 aa16.24■□□□□ 0.19
GNB1-204ENST00000439272 OSCARQ8IYS5 282 aa16.24■□□□□ 0.19
GNB1-204ENST00000439272 TRIM41Q8WV44 630 aa16.24■□□□□ 0.19
GNB1-204ENST00000439272 SYNJ2O15056 1496 aa16.23■□□□□ 0.19
GNB1-204ENST00000439272 KIF27Q86VH2 1401 aa16.23■□□□□ 0.19
GNB1-204ENST00000439272 CHMP7Q8WUX9 453 aaPredicted RBP16.2■□□□□ 0.18
GNB1-204ENST00000439272 CUL7Q14999 1698 aa16.2■□□□□ 0.18
GNB1-204ENST00000439272 FHAD1B1AJZ9 1412 aa16.16■□□□□ 0.18
GNB1-204ENST00000439272 GRIN2AQ12879 1464 aa16.15■□□□□ 0.18
GNB1-204ENST00000439272 RUSC2Q8N2Y8 1516 aa16.12■□□□□ 0.17
GNB1-204ENST00000439272 IGF1RP08069 1367 aa16.11■□□□□ 0.17
GNB1-204ENST00000439272 CLASP1Q7Z460 1538 aa16.1■□□□□ 0.17
GNB1-204ENST00000439272 PPP4R3CPQ6ZMV5 832 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms