RNA–Protein interactions for RNA: ENST00000493018.5

RPL35-204, Transcript of ribosomal protein L35, humanhuman

TSL 3

Gene RPL35, Length 692 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL35-204ENST00000493018 NISCHQ9Y2I1 1504 aa31.34■■■□□ 2.61
RPL35-204ENST00000493018 CCDC180Q9P1Z9 1646 aa27.67■■■□□ 2.02
RPL35-204ENST00000493018 ABCC9O60706 1549 aa26.29■■□□□ 1.8
RPL35-204ENST00000493018 ZCCHC6Q5VYS8 1495 aaKnown RBP26.26■■□□□ 1.79
RPL35-204ENST00000493018 DCAF1Q9Y4B6 1507 aa26.01■■□□□ 1.75
RPL35-204ENST00000493018 DCAF8L2P0C7V8 631 aa25.92■■□□□ 1.74
RPL35-204ENST00000493018 MYO15BQ96JP2 1530 aa25.86■■□□□ 1.73
RPL35-204ENST00000493018 NACADO15069 1562 aa25.82■■□□□ 1.72
RPL35-204ENST00000493018 RB1CC1Q8TDY2 1594 aa25.69■■□□□ 1.7
RPL35-204ENST00000493018 SCRIBQ14160 1630 aa25.24■■□□□ 1.63
RPL35-204ENST00000493018 SHROOM4Q9ULL8 1493 aa25.15■■□□□ 1.62
RPL35-204ENST00000493018 UNC13AQ9UPW8 1703 aa25.12■■□□□ 1.61
RPL35-204ENST00000493018 BICRAQ9NZM4 1560 aa24.79■■□□□ 1.56
RPL35-204ENST00000493018 PABPN1Q86U42 306 aaKnown RBP eCLIP24.64■■□□□ 1.54
RPL35-204ENST00000493018 BAZ1AQ9NRL2 1556 aaPredicted RBP24.31■■□□□ 1.48
RPL35-204ENST00000493018 CECR2Q9BXF3 1484 aa24.27■■□□□ 1.48
RPL35-204ENST00000493018 SMARCA4P51532 1647 aa24.21■■□□□ 1.47
RPL35-204ENST00000493018 EIF4G1Q04637 1599 aaKnown RBP24.13■■□□□ 1.45
RPL35-204ENST00000493018 MROH2BQ7Z745 1585 aa24.13■■□□□ 1.45
RPL35-204ENST00000493018 RSF1Q96T23 1441 aaPredicted RBP24.1■■□□□ 1.45
RPL35-204ENST00000493018 SUPT5HO00267 1087 aaKnown RBP24.04■■□□□ 1.44
RPL35-204ENST00000493018 WIZO95785 1651 aa23.97■■□□□ 1.43
RPL35-204ENST00000493018 PEG3Q9GZU2 1588 aa23.95■■□□□ 1.43
RPL35-204ENST00000493018 SMARCA2P51531 1590 aa23.95■■□□□ 1.42
RPL35-204ENST00000493018 CC2D2AQ9P2K1 1620 aa23.86■■□□□ 1.41
RPL35-204ENST00000493018 ATAD2BQ9ULI0 1458 aa23.85■■□□□ 1.41
RPL35-204ENST00000493018 TOP2AP11388 1531 aaKnown RBP23.77■■□□□ 1.4
RPL35-204ENST00000493018 BAZ1BQ9UIG0 1483 aaKnown RBP23.75■■□□□ 1.39
RPL35-204ENST00000493018 NCAPD3P42695 1498 aa23.75■■□□□ 1.39
RPL35-204ENST00000493018 HMGXB3Q12766 1538 aa23.74■■□□□ 1.39
RPL35-204ENST00000493018 CCDC88BA6NC98 1476 aa23.43■■□□□ 1.34
RPL35-204ENST00000493018 DNAJC5BQ9UF47 199 aa23.37■■□□□ 1.33
RPL35-204ENST00000493018 PRDM2Q13029 1718 aa23.15■■□□□ 1.3
RPL35-204ENST00000493018 CFTRP13569 1480 aa23.1■■□□□ 1.29
RPL35-204ENST00000493018 LAMC3Q9Y6N6 1575 aa23.1■■□□□ 1.29
RPL35-204ENST00000493018 CADPSQ9ULU8 1353 aa23.09■■□□□ 1.29
RPL35-204ENST00000493018 NESP48681 1621 aa22.93■■□□□ 1.26
RPL35-204ENST00000493018 PDS5BQ9NTI5 1447 aa22.9■■□□□ 1.26
RPL35-204ENST00000493018 FANCD2Q9BXW9 1451 aa22.85■■□□□ 1.25
RPL35-204ENST00000493018 CHIC1Q5VXU3 224 aa22.8■■□□□ 1.24
RPL35-204ENST00000493018 ABCC8Q09428 1581 aa22.8■■□□□ 1.24
RPL35-204ENST00000493018 CEP164Q9UPV0 1460 aa22.79■■□□□ 1.24
RPL35-204ENST00000493018 KIF21AQ7Z4S6 1674 aa22.79■■□□□ 1.24
RPL35-204ENST00000493018 WRNQ14191 1432 aaPredicted RBP eCLIP22.76■■□□□ 1.23
RPL35-204ENST00000493018 TRIM41Q8WV44 630 aa22.71■■□□□ 1.23
RPL35-204ENST00000493018 ERCC6Q03468 1493 aa22.69■■□□□ 1.22
RPL35-204ENST00000493018 BIVM-ERCC5R4GMW8 1640 aa22.68■■□□□ 1.22
RPL35-204ENST00000493018 TOP2BQ02880 1626 aa22.67■■□□□ 1.22
RPL35-204ENST00000493018 SYNJ1O43426 1573 aa22.65■■□□□ 1.22
RPL35-204ENST00000493018 DNMBPQ6XZF7 1577 aa22.63■■□□□ 1.21
RPL35-204ENST00000493018 CUX1P39880 1505 aa22.62■■□□□ 1.21
RPL35-204ENST00000493018 MRC2Q9UBG0 1479 aa22.6■■□□□ 1.21
RPL35-204ENST00000493018 TOPBP1Q92547 1522 aa22.55■■□□□ 1.2
RPL35-204ENST00000493018 URB2Q14146 1524 aaKnown RBP22.53■■□□□ 1.2
RPL35-204ENST00000493018 THOC2Q8NI27 1593 aaKnown RBP22.5■■□□□ 1.19
RPL35-204ENST00000493018 WDR62O43379 1518 aa22.49■■□□□ 1.19
RPL35-204ENST00000493018 FGD5Q6ZNL6 1462 aa22.46■■□□□ 1.19
RPL35-204ENST00000493018 POLA1P09884 1462 aaPredicted RBP22.4■■□□□ 1.18
RPL35-204ENST00000493018 SOGA1O94964 1423 aa22.33■■□□□ 1.17
RPL35-204ENST00000493018 EEA1Q15075 1411 aa22.33■■□□□ 1.17
RPL35-204ENST00000493018 WDR97A6NE52 1622 aa22.29■■□□□ 1.16
RPL35-204ENST00000493018 ABCA10Q8WWZ4 1543 aa22.27■■□□□ 1.16
RPL35-204ENST00000493018 IFT140Q96RY7 1462 aa22.27■■□□□ 1.16
RPL35-204ENST00000493018 KIF27Q86VH2 1401 aa22.26■■□□□ 1.15
RPL35-204ENST00000493018 TARBP1Q13395 1621 aaKnown RBP22.26■■□□□ 1.15
RPL35-204ENST00000493018 RAD54L2Q9Y4B4 1467 aa22.26■■□□□ 1.15
RPL35-204ENST00000493018 CUX2O14529 1486 aa22.24■■□□□ 1.15
RPL35-204ENST00000493018 FAM9AQ8IZU1 332 aaPredicted RBP22.18■■□□□ 1.14
RPL35-204ENST00000493018 RUSC2Q8N2Y8 1516 aa22.16■■□□□ 1.14
RPL35-204ENST00000493018 ABCA5Q8WWZ7 1642 aa22.15■■□□□ 1.14
RPL35-204ENST00000493018 CSRNP3Q8WYN3 585 aa22.12■■□□□ 1.13
RPL35-204ENST00000493018 GAPVD1Q14C86 1478 aa22.1■■□□□ 1.13
RPL35-204ENST00000493018 PBRM1Q86U86 1689 aa22.1■■□□□ 1.13
RPL35-204ENST00000493018 TDRD9Q8NDG6 1382 aaKnown RBP22.08■■□□□ 1.12
RPL35-204ENST00000493018 EIF4G3O43432 1585 aaKnown RBP22.07■■□□□ 1.12
RPL35-204ENST00000493018 ERICH3Q5RHP9 1530 aa22.06■■□□□ 1.12
RPL35-204ENST00000493018 CUL7Q14999 1698 aa22.06■■□□□ 1.12
RPL35-204ENST00000493018 KIF21BO75037 1637 aa22.03■■□□□ 1.12
RPL35-204ENST00000493018 ZNF608Q9ULD9 1512 aaPredicted RBP22.03■■□□□ 1.12
RPL35-204ENST00000493018 AQRO60306 1485 aaKnown RBP eCLIP22.01■■□□□ 1.111e-11■■■■■ 75.8
RPL35-204ENST00000493018 GRIN2BQ13224 1484 aa22.01■■□□□ 1.11
RPL35-204ENST00000493018 IGF1RP08069 1367 aa21.99■■□□□ 1.11
RPL35-204ENST00000493018 GOLGA3Q08378 1498 aa21.95■■□□□ 1.1
RPL35-204ENST00000493018 PRXQ9BXM0 1461 aa21.95■■□□□ 1.1
RPL35-204ENST00000493018 CARMIL1Q5VZK9 1371 aa21.93■■□□□ 1.1
RPL35-204ENST00000493018 RAPGEF2Q9Y4G8 1499 aa21.9■■□□□ 1.1
RPL35-204ENST00000493018 ADAMTS12P58397 1594 aa21.9■■□□□ 1.1
RPL35-204ENST00000493018 MAGI1Q96QZ7 1491 aaPredicted RBP21.9■■□□□ 1.1
RPL35-204ENST00000493018 FHAD1B1AJZ9 1412 aa21.88■■□□□ 1.09
RPL35-204ENST00000493018 SNAPC4Q5SXM2 1469 aa21.87■■□□□ 1.09
RPL35-204ENST00000493018 LOC105371045A0A1W2PR82 267 aa21.84■■□□□ 1.09
RPL35-204ENST00000493018 EHMT2Q96KQ7 1210 aa21.83■■□□□ 1.09
RPL35-204ENST00000493018 UBTFP17480 764 aaKnown RBP21.82■■□□□ 1.08
RPL35-204ENST00000493018 SYNJ2O15056 1496 aa21.79■■□□□ 1.08
RPL35-204ENST00000493018 TNIKQ9UKE5 1360 aa21.76■■□□□ 1.07
RPL35-204ENST00000493018 CTTNBP2Q8WZ74 1663 aa21.76■■□□□ 1.07
RPL35-204ENST00000493018 GRIN2AQ12879 1464 aa21.72■■□□□ 1.07
RPL35-204ENST00000493018 CHMP7Q8WUX9 453 aaPredicted RBP21.72■■□□□ 1.07
RPL35-204ENST00000493018 CHD1O14646 1710 aa21.69■■□□□ 1.06
RPL35-204ENST00000493018 FBLN2P98095 1184 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms