Protein–RNA interactions for Protein: Q07955

SRSF1, Serine/arginine-rich splicing factor 1, humanhuman

Known RBP eCLIP

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1Q07955 KPNB1-202ENST00000535458 3163 ntTSL 2 BASIC6.71□□□□□ -1.331e-6■■□□□ 11.8
SRSF1Q07955 SRPK1-201ENST00000346162 4762 ntTSL 212.58□□□□□ -0.41e-9■■□□□ 11.8
SRSF1Q07955 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.41e-9■■□□□ 11.8
SRSF1Q07955 SRPK1-202ENST00000361690 4286 ntTSL 1 (best)8.1□□□□□ -1.111e-9■■□□□ 11.8
SRSF1Q07955 SRPK1-205ENST00000423325 4357 ntTSL 2 BASIC7.55□□□□□ -1.21e-9■■□□□ 11.8
SRSF1Q07955 SRPK1-211ENST00000510290 621 ntTSL 35.55□□□□□ -1.521e-9■■□□□ 11.8
SRSF1Q07955 C16orf72-202ENST00000574285 10359 ntTSL 24.73□□□□□ -1.658e-10■■□□□ 11.8
SRSF1Q07955 GABRE-202ENST00000417300 619 ntTSL 211.64□□□□□ -0.552e-6■■□□□ 11.8
SRSF1Q07955 GABRE-205ENST00000465405 706 ntTSL 1 (best)8.37□□□□□ -1.072e-6■■□□□ 11.8
SRSF1Q07955 GABRE-211ENST00000491339 2072 ntTSL 28.13□□□□□ -1.112e-6■■□□□ 11.8
SRSF1Q07955 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC23.6■■□□□ 1.379e-11■■□□□ 11.8
SRSF1Q07955 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC21.21■□□□□ 0.999e-11■■□□□ 11.8
SRSF1Q07955 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.999e-11■■□□□ 11.8
SRSF1Q07955 CLTA-210ENST00000540080 989 ntTSL 2 BASIC21.21■□□□□ 0.999e-11■■□□□ 11.8
SRSF1Q07955 CLTA-206ENST00000466396 695 ntTSL 2 BASIC21.07■□□□□ 0.969e-11■■□□□ 11.8
SRSF1Q07955 CLTA-208ENST00000493185 714 ntTSL 319.61■□□□□ 0.739e-11■■□□□ 11.8
SRSF1Q07955 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.569e-11■■□□□ 11.8
SRSF1Q07955 TMEM259-207ENST00000589831 432 ntTSL 217.99■□□□□ 0.479e-11■■□□□ 11.8
SRSF1Q07955 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.159e-11■■□□□ 11.8
SRSF1Q07955 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC16.01■□□□□ 0.159e-11■■□□□ 11.8
SRSF1Q07955 CLTA-205ENST00000464497 1890 ntTSL 514.74□□□□□ -0.059e-11■■□□□ 11.8
SRSF1Q07955 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.226e-7■■□□□ 11.8
SRSF1Q07955 CENPX-203ENST00000577379 861 ntTSL 521.14■□□□□ 0.976e-7■■□□□ 11.8
SRSF1Q07955 CENPX-211ENST00000585091 739 ntTSL 320.27■□□□□ 0.846e-7■■□□□ 11.8
SRSF1Q07955 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC18.09■□□□□ 0.496e-7■■□□□ 11.8
SRSF1Q07955 CENPX-207ENST00000583767 894 ntTSL 318.03■□□□□ 0.486e-7■■□□□ 11.8
SRSF1Q07955 CENPX-209ENST00000584514 882 ntTSL 217.87■□□□□ 0.456e-7■■□□□ 11.8
SRSF1Q07955 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC17.59■□□□□ 0.416e-7■■□□□ 11.8
SRSF1Q07955 CENPX-205ENST00000580090 752 ntTSL 217.24■□□□□ 0.356e-7■■□□□ 11.8
SRSF1Q07955 CENPX-204ENST00000579520 702 ntTSL 315.81■□□□□ 0.126e-7■■□□□ 11.8
SRSF1Q07955 CENPX-210ENST00000584600 730 ntTSL 215.6■□□□□ 0.096e-7■■□□□ 11.8
SRSF1Q07955 CENPX-208ENST00000584347 799 ntTSL 2 BASIC13.74□□□□□ -0.216e-7■■□□□ 11.8
SRSF1Q07955 RBM39-236ENST00000490484 871 ntTSL 59.85□□□□□ -0.832e-9■■□□□ 11.8
SRSF1Q07955 RBM39-239ENST00000494274 704 ntTSL 36.79□□□□□ -1.322e-9■■□□□ 11.8
SRSF1Q07955 RBM39-244ENST00000615771 686 ntTSL 55.72□□□□□ -1.492e-9■■□□□ 11.8
SRSF1Q07955 RBM39-237ENST00000492779 2316 ntTSL 25.52□□□□□ -1.532e-9■■□□□ 11.8
SRSF1Q07955 RBM39-217ENST00000448303 1008 ntTSL 54.47□□□□□ -1.692e-9■■□□□ 11.8
SRSF1Q07955 RBM39-221ENST00000461283 2415 ntTSL 52.92□□□□□ -1.942e-9■■□□□ 11.8
SRSF1Q07955 ZNF638-226ENST00000494621 871 ntTSL 316.92■□□□□ 0.32e-8■■□□□ 11.8
SRSF1Q07955 ZNF638-206ENST00000437658 931 ntTSL 215.98■□□□□ 0.152e-8■■□□□ 11.8
SRSF1Q07955 ZNF638-213ENST00000466330 746 ntTSL 314.47□□□□□ -0.092e-8■■□□□ 11.8
SRSF1Q07955 ZNF638-212ENST00000464375 626 ntTSL 313.79□□□□□ -0.22e-8■■□□□ 11.8
SRSF1Q07955 ZNF638-216ENST00000475743 590 ntTSL 413.54□□□□□ -0.242e-8■■□□□ 11.8
SRSF1Q07955 ZNF638-214ENST00000466975 560 ntTSL 412.61□□□□□ -0.392e-8■■□□□ 11.8
SRSF1Q07955 ZNF638-205ENST00000417778 760 ntTSL 312.06□□□□□ -0.482e-8■■□□□ 11.8
SRSF1Q07955 ZNF638-208ENST00000454278 595 ntTSL 411.5□□□□□ -0.572e-8■■□□□ 11.8
SRSF1Q07955 ZNF638-207ENST00000454122 731 ntTSL 311.17□□□□□ -0.622e-8■■□□□ 11.8
SRSF1Q07955 ZNF638-220ENST00000487707 592 ntTSL 311.15□□□□□ -0.622e-8■■□□□ 11.8
SRSF1Q07955 ZNF638-209ENST00000455226 585 ntTSL 411.08□□□□□ -0.642e-8■■□□□ 11.8
SRSF1Q07955 ZNF638-204ENST00000410075 3518 ntTSL 1 (best) BASIC8.34□□□□□ -1.072e-8■■□□□ 11.8
SRSF1Q07955 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.652e-8■■□□□ 11.8
SRSF1Q07955 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.852e-8■■□□□ 11.8
SRSF1Q07955 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC18.71■□□□□ 0.592e-6■■□□□ 11.8
SRSF1Q07955 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.052e-6■■□□□ 11.8
SRSF1Q07955 SCARB1-205ENST00000538291 5527 ntTSL 513.92□□□□□ -0.182e-6■■□□□ 11.8
SRSF1Q07955 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC13.75□□□□□ -0.212e-6■■□□□ 11.8
SRSF1Q07955 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC12.33□□□□□ -0.442e-6■■□□□ 11.8
SRSF1Q07955 MCM3-204ENST00000476448 982 ntTSL 214.65□□□□□ -0.068e-7■■□□□ 11.8
SRSF1Q07955 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.293e-6■■□□□ 11.8
SRSF1Q07955 ESYT2-202ENST00000275418 3251 ntAPPRIS ALT2 TSL 515.82■□□□□ 0.123e-6■■□□□ 11.8
SRSF1Q07955 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.263e-6■■□□□ 11.8
SRSF1Q07955 ITPA-204ENST00000460550 967 ntTSL 215.72■□□□□ 0.119e-7■■□□□ 11.8
SRSF1Q07955 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC15.47■□□□□ 0.079e-7■■□□□ 11.8
SRSF1Q07955 ITPA-208ENST00000483354 1028 ntTSL 315.47■□□□□ 0.079e-7■■□□□ 11.8
SRSF1Q07955 ITPA-209ENST00000490838 977 ntTSL 215.24■□□□□ 0.039e-7■■□□□ 11.8
SRSF1Q07955 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.059e-7■■□□□ 11.8
SRSF1Q07955 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC14.75□□□□□ -0.059e-7■■□□□ 11.8
SRSF1Q07955 PPOX-207ENST00000468968 904 ntTSL 518.96■□□□□ 0.633e-11■■□□□ 11.8
SRSF1Q07955 PPOX-208ENST00000470607 965 ntTSL 316.9■□□□□ 0.33e-11■■□□□ 11.8
SRSF1Q07955 PPOX-210ENST00000490768 1056 ntTSL 316.15■□□□□ 0.183e-11■■□□□ 11.8
SRSF1Q07955 PPOX-209ENST00000479246 963 ntTSL 314.48□□□□□ -0.093e-11■■□□□ 11.8
SRSF1Q07955 RRP7A-203ENST00000483303 580 ntTSL 317.32■□□□□ 0.361e-11■■□□□ 11.8
SRSF1Q07955 RRP7A-202ENST00000416699 687 ntTSL 514.47□□□□□ -0.091e-11■■□□□ 11.8
SRSF1Q07955 RRP7A-201ENST00000323013 3801 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.061e-11■■□□□ 11.8
SRSF1Q07955 NDUFV1-207ENST00000526169 774 ntTSL 1 (best)18.2■□□□□ 0.51e-6■■□□□ 11.8
SRSF1Q07955 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.071e-6■■□□□ 11.8
SRSF1Q07955 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.041e-6■■□□□ 11.8
SRSF1Q07955 NDUFV1-208ENST00000526770 1748 ntTSL 514.69□□□□□ -0.061e-6■■□□□ 11.8
SRSF1Q07955 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC14.4□□□□□ -0.11e-6■■□□□ 11.8
SRSF1Q07955 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC14.09□□□□□ -0.151e-6■■□□□ 11.8
SRSF1Q07955 WDR27-202ENST00000441385 683 ntTSL 312.9□□□□□ -0.348e-7■■□□□ 11.8
SRSF1Q07955 KMT2C-211ENST00000490130 641 ntTSL 25□□□□□ -1.611e-7■■□□□ 11.8
SRSF1Q07955 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC15.92■□□□□ 0.147e-8■■□□□ 11.8
SRSF1Q07955 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.017e-8■■□□□ 11.8
SRSF1Q07955 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.017e-8■■□□□ 11.8
SRSF1Q07955 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.437e-8■■□□□ 11.8
SRSF1Q07955 VWCE-206ENST00000538438 1076 ntTSL 314.93□□□□□ -0.021e-13■■□□□ 11.8
SRSF1Q07955 SH3PXD2A-204ENST00000420222 3251 ntTSL 211.51□□□□□ -0.571e-13■■□□□ 11.8
SRSF1Q07955 SH3PXD2A-201ENST00000315994 5504 ntTSL 1 (best)10.3□□□□□ -0.761e-13■■□□□ 11.8
SRSF1Q07955 CDC42SE1-203ENST00000470278 939 ntTSL 513.93□□□□□ -0.182e-6■■□□□ 11.8
SRSF1Q07955 CDC42SE1-206ENST00000492796 1174 ntTSL 29.81□□□□□ -0.842e-6■■□□□ 11.8
SRSF1Q07955 CDC42SE1-207ENST00000540998 3181 ntAPPRIS P1 TSL 2 BASIC7.85□□□□□ -1.152e-6■■□□□ 11.8
SRSF1Q07955 CDC42SE1-202ENST00000439374 3498 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.192e-6■■□□□ 11.8
SRSF1Q07955 CDC42SE1-204ENST00000483763 2379 ntTSL 1 (best)7.37□□□□□ -1.232e-6■■□□□ 11.8
SRSF1Q07955 CDC42SE1-201ENST00000357235 3045 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.382e-6■■□□□ 11.8
SRSF1Q07955 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.432e-6■■□□□ 11.8
SRSF1Q07955 CCDC84-209ENST00000580556 562 ntTSL 311.87□□□□□ -0.511e-6■■□□□ 11.7
SRSF1Q07955 MTA2-202ENST00000524902 2577 ntTSL 1 (best) BASIC9.66□□□□□ -0.863e-6■■□□□ 11.7
SRSF1Q07955 SNRNP70-203ENST00000544278 3221 ntTSL 1 (best)11.88□□□□□ -0.514e-16■■□□□ 11.7
SRSF1Q07955 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.878e-7■■□□□ 11.7
Retrieved 100 of 14,836 protein–RNA pairs in 134.9 ms