RNA–Protein interactions for RNA: ENST00000580556.5

CCDC84-209, Transcript of coiled-coil domain containing 84, humanhuman

TSL 3

Gene CCDC84, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC84-209ENST00000580556 NISCHQ9Y2I1 1504 aa29.11■■■□□ 2.25
CCDC84-209ENST00000580556 ABCC9O60706 1549 aa26.91■■□□□ 1.9
CCDC84-209ENST00000580556 CCDC180Q9P1Z9 1646 aa26.28■■□□□ 1.8
CCDC84-209ENST00000580556 DNAJC5BQ9UF47 199 aa25.78■■□□□ 1.72
CCDC84-209ENST00000580556 RB1CC1Q8TDY2 1594 aa25.28■■□□□ 1.64
CCDC84-209ENST00000580556 PABPN1Q86U42 306 aaKnown RBP eCLIP25.02■■□□□ 1.6
CCDC84-209ENST00000580556 NACADO15069 1562 aa24.97■■□□□ 1.59
CCDC84-209ENST00000580556 DCAF8L2P0C7V8 631 aa24.88■■□□□ 1.57
CCDC84-209ENST00000580556 UNC13AQ9UPW8 1703 aa24.81■■□□□ 1.56
CCDC84-209ENST00000580556 BICRAQ9NZM4 1560 aa24.65■■□□□ 1.54
CCDC84-209ENST00000580556 MYO15BQ96JP2 1530 aa24.41■■□□□ 1.5
CCDC84-209ENST00000580556 CECR2Q9BXF3 1484 aa24.26■■□□□ 1.47
CCDC84-209ENST00000580556 CC2D2AQ9P2K1 1620 aa24.25■■□□□ 1.47
CCDC84-209ENST00000580556 ZCCHC6Q5VYS8 1495 aaKnown RBP24.11■■□□□ 1.45
CCDC84-209ENST00000580556 SHROOM4Q9ULL8 1493 aa24.09■■□□□ 1.45
CCDC84-209ENST00000580556 EIF4G1Q04637 1599 aaKnown RBP24.06■■□□□ 1.44
CCDC84-209ENST00000580556 SCRIBQ14160 1630 aa24.02■■□□□ 1.44
CCDC84-209ENST00000580556 DCAF1Q9Y4B6 1507 aa23.94■■□□□ 1.42
CCDC84-209ENST00000580556 DNAJC5Q9H3Z4 198 aa23.93■■□□□ 1.42
CCDC84-209ENST00000580556 CUX2O14529 1486 aa23.3■■□□□ 1.32
CCDC84-209ENST00000580556 ERCC6Q03468 1493 aa23.21■■□□□ 1.31
CCDC84-209ENST00000580556 NCAPD3P42695 1498 aa23.09■■□□□ 1.29
CCDC84-209ENST00000580556 NESP48681 1621 aa23■■□□□ 1.27
CCDC84-209ENST00000580556 ATAD2BQ9ULI0 1458 aa22.98■■□□□ 1.27
CCDC84-209ENST00000580556 HMGXB3Q12766 1538 aa22.85■■□□□ 1.25
CCDC84-209ENST00000580556 SMARCA4P51532 1647 aa22.82■■□□□ 1.24
CCDC84-209ENST00000580556 SMARCA2P51531 1590 aa22.82■■□□□ 1.24
CCDC84-209ENST00000580556 THOC2Q8NI27 1593 aaKnown RBP22.8■■□□□ 1.24
CCDC84-209ENST00000580556 TRIM41Q8WV44 630 aa22.74■■□□□ 1.23
CCDC84-209ENST00000580556 BAZ1BQ9UIG0 1483 aaKnown RBP22.71■■□□□ 1.23
CCDC84-209ENST00000580556 KIF21AQ7Z4S6 1674 aa22.65■■□□□ 1.22
CCDC84-209ENST00000580556 LAMC3Q9Y6N6 1575 aa22.63■■□□□ 1.21
CCDC84-209ENST00000580556 BAZ1AQ9NRL2 1556 aaPredicted RBP22.59■■□□□ 1.21
CCDC84-209ENST00000580556 PEG3Q9GZU2 1588 aa22.56■■□□□ 1.2
CCDC84-209ENST00000580556 PDS5BQ9NTI5 1447 aa22.51■■□□□ 1.19
CCDC84-209ENST00000580556 MROH2BQ7Z745 1585 aa22.48■■□□□ 1.19
CCDC84-209ENST00000580556 MRC2Q9UBG0 1479 aa22.39■■□□□ 1.17
CCDC84-209ENST00000580556 CADPSQ9ULU8 1353 aa22.38■■□□□ 1.17
CCDC84-209ENST00000580556 WDR62O43379 1518 aa22.35■■□□□ 1.17
CCDC84-209ENST00000580556 WIZO95785 1651 aa22.2■■□□□ 1.14
CCDC84-209ENST00000580556 CEP164Q9UPV0 1460 aa22.19■■□□□ 1.14
CCDC84-209ENST00000580556 OSCARQ8IYS5 282 aa22.18■■□□□ 1.14
CCDC84-209ENST00000580556 FANCD2Q9BXW9 1451 aa22.15■■□□□ 1.14
CCDC84-209ENST00000580556 RSF1Q96T23 1441 aaPredicted RBP22.07■■□□□ 1.12
CCDC84-209ENST00000580556 URB2Q14146 1524 aaKnown RBP22.02■■□□□ 1.12
CCDC84-209ENST00000580556 CFTRP13569 1480 aa22.01■■□□□ 1.11
CCDC84-209ENST00000580556 RIMBP3CA6NJZ7 1639 aa21.99■■□□□ 1.11
CCDC84-209ENST00000580556 RIMBP3BA6NNM3 1639 aa21.99■■□□□ 1.11
CCDC84-209ENST00000580556 RIMBP3Q9UFD9 1639 aa21.99■■□□□ 1.11
CCDC84-209ENST00000580556 ZNF608Q9ULD9 1512 aaPredicted RBP21.86■■□□□ 1.09
CCDC84-209ENST00000580556 ARHGEF11O15085 1522 aa21.85■■□□□ 1.09
CCDC84-209ENST00000580556 TOP2AP11388 1531 aaKnown RBP21.8■■□□□ 1.08
CCDC84-209ENST00000580556 CYB5RLQ6IPT4 315 aa21.77■■□□□ 1.08
CCDC84-209ENST00000580556 IFT140Q96RY7 1462 aa21.75■■□□□ 1.07
CCDC84-209ENST00000580556 PRDM2Q13029 1718 aa21.73■■□□□ 1.07
CCDC84-209ENST00000580556 SUPT5HO00267 1087 aaKnown RBP21.68■■□□□ 1.06
CCDC84-209ENST00000580556 TOPBP1Q92547 1522 aa21.67■■□□□ 1.06
CCDC84-209ENST00000580556 TRHP20396 242 aaPredicted RBP21.67■■□□□ 1.06
CCDC84-209ENST00000580556 EIF4G3O43432 1585 aaKnown RBP21.66■■□□□ 1.06
CCDC84-209ENST00000580556 ARAP1Q96P48 1450 aa21.63■■□□□ 1.05
CCDC84-209ENST00000580556 CHD1O14646 1710 aa21.62■■□□□ 1.05
CCDC84-209ENST00000580556 CCDC88BA6NC98 1476 aa21.62■■□□□ 1.05
CCDC84-209ENST00000580556 AQRO60306 1485 aaKnown RBP eCLIP21.59■■□□□ 1.054e-7■■■■■ 35.5
CCDC84-209ENST00000580556 FBLN2P98095 1184 aa21.55■■□□□ 1.04
CCDC84-209ENST00000580556 TARBP1Q13395 1621 aaKnown RBP21.52■■□□□ 1.04
CCDC84-209ENST00000580556 DNMBPQ6XZF7 1577 aa21.52■■□□□ 1.04
CCDC84-209ENST00000580556 ABCC8Q09428 1581 aa21.49■■□□□ 1.03
CCDC84-209ENST00000580556 POLA1P09884 1462 aaPredicted RBP21.42■■□□□ 1.02
CCDC84-209ENST00000580556 RAD54L2Q9Y4B4 1467 aa21.41■■□□□ 1.02
CCDC84-209ENST00000580556 AEBP2Q6ZN18 517 aaPredicted RBP21.38■■□□□ 1.01
CCDC84-209ENST00000580556 TDRD9Q8NDG6 1382 aaKnown RBP21.37■■□□□ 1.01
CCDC84-209ENST00000580556 CLASP1Q7Z460 1538 aa21.34■■□□□ 1.01
CCDC84-209ENST00000580556 SNAPC4Q5SXM2 1469 aa21.32■■□□□ 1
CCDC84-209ENST00000580556 SOGA1O94964 1423 aa21.31■■□□□ 1
CCDC84-209ENST00000580556 CHMP7Q8WUX9 453 aaPredicted RBP21.26■□□□□ 0.99
CCDC84-209ENST00000580556 SYNJ1O43426 1573 aa21.23■□□□□ 0.99
CCDC84-209ENST00000580556 FGD5Q6ZNL6 1462 aa21.22■□□□□ 0.99
CCDC84-209ENST00000580556 MAGI1Q96QZ7 1491 aaPredicted RBP21.18■□□□□ 0.98
CCDC84-209ENST00000580556 GRIN2BQ13224 1484 aa21.15■□□□□ 0.98
CCDC84-209ENST00000580556 WDR97A6NE52 1622 aa21.15■□□□□ 0.98
CCDC84-209ENST00000580556 SYNJ2O15056 1496 aa21.14■□□□□ 0.98
CCDC84-209ENST00000580556 GAPVD1Q14C86 1478 aa21.14■□□□□ 0.98
CCDC84-209ENST00000580556 CUX1P39880 1505 aa21.14■□□□□ 0.97
CCDC84-209ENST00000580556 PBRM1Q86U86 1689 aa21.06■□□□□ 0.96
CCDC84-209ENST00000580556 ERCC6L2Q5T890 1561 aa21.06■□□□□ 0.96
CCDC84-209ENST00000580556 ABCA5Q8WWZ7 1642 aa20.95■□□□□ 0.94
CCDC84-209ENST00000580556 ABCA10Q8WWZ4 1543 aa20.91■□□□□ 0.94
CCDC84-209ENST00000580556 CEP170Q5SW79 1584 aa20.9■□□□□ 0.94
CCDC84-209ENST00000580556 GRIN2AQ12879 1464 aa20.89■□□□□ 0.94
CCDC84-209ENST00000580556 KIF13AQ9H1H9 1805 aa20.85■□□□□ 0.93
CCDC84-209ENST00000580556 NUP160Q12769 1436 aa20.85■□□□□ 0.93
CCDC84-209ENST00000580556 ADAMTS12P58397 1594 aa20.83■□□□□ 0.92
CCDC84-209ENST00000580556 SHROOM2Q13796 1616 aa20.81■□□□□ 0.92
CCDC84-209ENST00000580556 WRNQ14191 1432 aaPredicted RBP eCLIP20.8■□□□□ 0.92
CCDC84-209ENST00000580556 TOP2BQ02880 1626 aa20.75■□□□□ 0.91
CCDC84-209ENST00000580556 BIVM-ERCC5R4GMW8 1640 aa20.75■□□□□ 0.91
CCDC84-209ENST00000580556 FHAD1B1AJZ9 1412 aa20.72■□□□□ 0.91
CCDC84-209ENST00000580556 PRG4Q92954 1404 aaPredicted RBP20.7■□□□□ 0.9
CCDC84-209ENST00000580556 FAM69CQ0P6D2 419 aa20.69■□□□□ 0.9
CCDC84-209ENST00000580556 JPH4Q96JJ6 628 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms