RNA–Protein interactions for RNA: ENST00000396603.6

CLTA-203, Transcript of clathrin light chain A, humanhuman

TSL 1 (best) BASIC

Gene CLTA, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-203ENST00000396603 NISCHQ9Y2I1 1504 aa40.95■■■■■ 4.15
CLTA-203ENST00000396603 CCDC180Q9P1Z9 1646 aa36.81■■■■□ 3.48
CLTA-203ENST00000396603 ABCC9O60706 1549 aa36.62■■■■□ 3.45
CLTA-203ENST00000396603 RB1CC1Q8TDY2 1594 aa35.01■■■■□ 3.2
CLTA-203ENST00000396603 NACADO15069 1562 aa34.81■■■■□ 3.16
CLTA-203ENST00000396603 MYO15BQ96JP2 1530 aa34.45■■■■□ 3.1
CLTA-203ENST00000396603 DCAF8L2P0C7V8 631 aa34.33■■■■□ 3.09
CLTA-203ENST00000396603 DNAJC5BQ9UF47 199 aa34.3■■■■□ 3.08
CLTA-203ENST00000396603 UNC13AQ9UPW8 1703 aa34.07■■■■□ 3.05
CLTA-203ENST00000396603 PABPN1Q86U42 306 aaKnown RBP eCLIP34.03■■■■□ 3.04
CLTA-203ENST00000396603 DCAF1Q9Y4B6 1507 aa33.97■■■■□ 3.03
CLTA-203ENST00000396603 ZCCHC6Q5VYS8 1495 aaKnown RBP33.96■■■■□ 3.03
CLTA-203ENST00000396603 BICRAQ9NZM4 1560 aa33.92■■■■□ 3.02
CLTA-203ENST00000396603 SHROOM4Q9ULL8 1493 aa33.72■■■□□ 2.99
CLTA-203ENST00000396603 SCRIBQ14160 1630 aa33.36■■■□□ 2.93
CLTA-203ENST00000396603 CC2D2AQ9P2K1 1620 aa33.14■■■□□ 2.9
CLTA-203ENST00000396603 EIF4G1Q04637 1599 aaKnown RBP33.12■■■□□ 2.89
CLTA-203ENST00000396603 CECR2Q9BXF3 1484 aa33.06■■■□□ 2.88
CLTA-203ENST00000396603 NCAPD3P42695 1498 aa32.13■■■□□ 2.73
CLTA-203ENST00000396603 ATAD2BQ9ULI0 1458 aa31.97■■■□□ 2.71
CLTA-203ENST00000396603 SMARCA2P51531 1590 aa31.94■■■□□ 2.7
CLTA-203ENST00000396603 SMARCA4P51532 1647 aa31.93■■■□□ 2.7
CLTA-203ENST00000396603 HMGXB3Q12766 1538 aa31.9■■■□□ 2.7
CLTA-203ENST00000396603 BAZ1AQ9NRL2 1556 aaPredicted RBP31.82■■■□□ 2.68
CLTA-203ENST00000396603 CUX2O14529 1486 aa31.75■■■□□ 2.67
CLTA-203ENST00000396603 PEG3Q9GZU2 1588 aa31.73■■■□□ 2.67
CLTA-203ENST00000396603 ERCC6Q03468 1493 aa31.68■■■□□ 2.66
CLTA-203ENST00000396603 BAZ1BQ9UIG0 1483 aaKnown RBP31.65■■■□□ 2.66
CLTA-203ENST00000396603 DNAJC5Q9H3Z4 198 aa31.63■■■□□ 2.65
CLTA-203ENST00000396603 MROH2BQ7Z745 1585 aa31.47■■■□□ 2.63
CLTA-203ENST00000396603 NESP48681 1621 aa31.44■■■□□ 2.62
CLTA-203ENST00000396603 LAMC3Q9Y6N6 1575 aa31.4■■■□□ 2.62
CLTA-203ENST00000396603 THOC2Q8NI27 1593 aaKnown RBP31.23■■■□□ 2.59
CLTA-203ENST00000396603 PDS5BQ9NTI5 1447 aa31.22■■■□□ 2.59
CLTA-203ENST00000396603 CADPSQ9ULU8 1353 aa31.12■■■□□ 2.57
CLTA-203ENST00000396603 WIZO95785 1651 aa31.06■■■□□ 2.56
CLTA-203ENST00000396603 KIF21AQ7Z4S6 1674 aa31.06■■■□□ 2.56
CLTA-203ENST00000396603 MRC2Q9UBG0 1479 aa30.91■■■□□ 2.54
CLTA-203ENST00000396603 RSF1Q96T23 1441 aaPredicted RBP30.87■■■□□ 2.53
CLTA-203ENST00000396603 WDR62O43379 1518 aa30.86■■■□□ 2.53
CLTA-203ENST00000396603 TOP2AP11388 1531 aaKnown RBP30.78■■■□□ 2.52
CLTA-203ENST00000396603 CFTRP13569 1480 aa30.78■■■□□ 2.52
CLTA-203ENST00000396603 CEP164Q9UPV0 1460 aa30.77■■■□□ 2.52
CLTA-203ENST00000396603 FANCD2Q9BXW9 1451 aa30.72■■■□□ 2.51
CLTA-203ENST00000396603 URB2Q14146 1524 aaKnown RBP30.44■■■□□ 2.46
CLTA-203ENST00000396603 PRDM2Q13029 1718 aa30.42■■■□□ 2.46
CLTA-203ENST00000396603 CCDC88BA6NC98 1476 aa30.38■■■□□ 2.45
CLTA-203ENST00000396603 OSCARQ8IYS5 282 aa30.21■■■□□ 2.43
CLTA-203ENST00000396603 ABCC8Q09428 1581 aa30.2■■■□□ 2.43
CLTA-203ENST00000396603 IFT140Q96RY7 1462 aa30.2■■■□□ 2.43
CLTA-203ENST00000396603 TOPBP1Q92547 1522 aa30.14■■■□□ 2.42
CLTA-203ENST00000396603 TRIM41Q8WV44 630 aa30.08■■■□□ 2.41
CLTA-203ENST00000396603 DNMBPQ6XZF7 1577 aa30.06■■■□□ 2.4
CLTA-203ENST00000396603 ZNF608Q9ULD9 1512 aaPredicted RBP30.02■■■□□ 2.4
CLTA-203ENST00000396603 EIF4G3O43432 1585 aaKnown RBP29.91■■■□□ 2.38
CLTA-203ENST00000396603 TARBP1Q13395 1621 aaKnown RBP29.88■■■□□ 2.37
CLTA-203ENST00000396603 POLA1P09884 1462 aaPredicted RBP29.83■■■□□ 2.37
CLTA-203ENST00000396603 RIMBP3CA6NJZ7 1639 aa29.77■■■□□ 2.36
CLTA-203ENST00000396603 RIMBP3BA6NNM3 1639 aa29.77■■■□□ 2.36
CLTA-203ENST00000396603 RIMBP3Q9UFD9 1639 aa29.77■■■□□ 2.36
CLTA-203ENST00000396603 AQRO60306 1485 aaKnown RBP eCLIP29.75■■■□□ 2.35
CLTA-203ENST00000396603 WDR97A6NE52 1622 aa29.74■■■□□ 2.35
CLTA-203ENST00000396603 ARHGEF11O15085 1522 aa29.71■■■□□ 2.35
CLTA-203ENST00000396603 SOGA1O94964 1423 aa29.69■■■□□ 2.34
CLTA-203ENST00000396603 RAD54L2Q9Y4B4 1467 aa29.64■■■□□ 2.34
CLTA-203ENST00000396603 CHD1O14646 1710 aa29.62■■■□□ 2.33
CLTA-203ENST00000396603 FGD5Q6ZNL6 1462 aa29.62■■■□□ 2.33
CLTA-203ENST00000396603 CUX1P39880 1505 aa29.58■■■□□ 2.33
CLTA-203ENST00000396603 TDRD9Q8NDG6 1382 aaKnown RBP29.56■■■□□ 2.32
CLTA-203ENST00000396603 MAGI1Q96QZ7 1491 aaPredicted RBP29.52■■■□□ 2.32
CLTA-203ENST00000396603 FBLN2P98095 1184 aa29.49■■■□□ 2.31
CLTA-203ENST00000396603 SNAPC4Q5SXM2 1469 aa29.48■■■□□ 2.31
CLTA-203ENST00000396603 GRIN2BQ13224 1484 aa29.48■■■□□ 2.31
CLTA-203ENST00000396603 ARAP1Q96P48 1450 aa29.41■■■□□ 2.3
CLTA-203ENST00000396603 CYB5RLQ6IPT4 315 aa29.4■■■□□ 2.3
CLTA-203ENST00000396603 CLASP1Q7Z460 1538 aa29.4■■■□□ 2.3
CLTA-203ENST00000396603 SYNJ1O43426 1573 aa29.39■■■□□ 2.3
CLTA-203ENST00000396603 SYNJ2O15056 1496 aa29.39■■■□□ 2.3
CLTA-203ENST00000396603 CHMP7Q8WUX9 453 aaPredicted RBP29.38■■■□□ 2.29
CLTA-203ENST00000396603 ABCA10Q8WWZ4 1543 aa29.36■■■□□ 2.29
CLTA-203ENST00000396603 GAPVD1Q14C86 1478 aa29.35■■■□□ 2.29
CLTA-203ENST00000396603 SUPT5HO00267 1087 aaKnown RBP29.31■■■□□ 2.28
CLTA-203ENST00000396603 PBRM1Q86U86 1689 aa29.28■■■□□ 2.28
CLTA-203ENST00000396603 ABCA5Q8WWZ7 1642 aa29.28■■■□□ 2.28
CLTA-203ENST00000396603 WRNQ14191 1432 aaPredicted RBP eCLIP29.23■■■□□ 2.27
CLTA-203ENST00000396603 TOP2BQ02880 1626 aa29.17■■■□□ 2.26
CLTA-203ENST00000396603 BIVM-ERCC5R4GMW8 1640 aa29.16■■■□□ 2.26
CLTA-203ENST00000396603 GRIN2AQ12879 1464 aa29.08■■■□□ 2.25
CLTA-203ENST00000396603 TRHP20396 242 aaPredicted RBP29.06■■■□□ 2.24
CLTA-203ENST00000396603 ADAMTS12P58397 1594 aa29.05■■■□□ 2.24
CLTA-203ENST00000396603 ERICH3Q5RHP9 1530 aa29.02■■■□□ 2.24
CLTA-203ENST00000396603 NUP160Q12769 1436 aa29.02■■■□□ 2.24
CLTA-203ENST00000396603 FHAD1B1AJZ9 1412 aa29.01■■■□□ 2.23
CLTA-203ENST00000396603 CEP170Q5SW79 1584 aa28.92■■■□□ 2.22
CLTA-203ENST00000396603 SHROOM2Q13796 1616 aa28.87■■■□□ 2.21
CLTA-203ENST00000396603 ERCC6L2Q5T890 1561 aa28.8■■■□□ 2.2
CLTA-203ENST00000396603 PRG4Q92954 1404 aaPredicted RBP28.67■■■□□ 2.18
CLTA-203ENST00000396603 JPH4Q96JJ6 628 aa28.65■■■□□ 2.18
CLTA-203ENST00000396603 RUSC2Q8N2Y8 1516 aa28.64■■■□□ 2.18
CLTA-203ENST00000396603 KIF27Q86VH2 1401 aa28.61■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms