RNA–Protein interactions for RNA: ENST00000532303.5

NDUFV1-223, Transcript of NADH:ubiquinone oxidoreductase core subunit V1, humanhuman

TSL 2 BASIC

Gene NDUFV1, Length 1,493 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFV1-223ENST00000532303 NISCHQ9Y2I1 1504 aa37.38■■■■□ 3.57
NDUFV1-223ENST00000532303 ABCC9O60706 1549 aa32.67■■■□□ 2.82
NDUFV1-223ENST00000532303 CCDC180Q9P1Z9 1646 aa32.44■■■□□ 2.78
NDUFV1-223ENST00000532303 ZCCHC6Q5VYS8 1495 aaKnown RBP31.51■■■□□ 2.63
NDUFV1-223ENST00000532303 DCAF1Q9Y4B6 1507 aa31.06■■■□□ 2.56
NDUFV1-223ENST00000532303 DNAJC5BQ9UF47 199 aa31.05■■■□□ 2.56
NDUFV1-223ENST00000532303 RB1CC1Q8TDY2 1594 aa30.88■■■□□ 2.53
NDUFV1-223ENST00000532303 SHROOM4Q9ULL8 1493 aa30.64■■■□□ 2.49
NDUFV1-223ENST00000532303 DCAF8L2P0C7V8 631 aa30.58■■■□□ 2.49
NDUFV1-223ENST00000532303 MYO15BQ96JP2 1530 aa30.54■■■□□ 2.48
NDUFV1-223ENST00000532303 NACADO15069 1562 aa30.54■■■□□ 2.48
NDUFV1-223ENST00000532303 PABPN1Q86U42 306 aaKnown RBP eCLIP30.33■■■□□ 2.455e-7■■■□□ 18.9
NDUFV1-223ENST00000532303 UNC13AQ9UPW8 1703 aa30.21■■■□□ 2.43
NDUFV1-223ENST00000532303 BICRAQ9NZM4 1560 aa29.98■■■□□ 2.39
NDUFV1-223ENST00000532303 SUPT5HO00267 1087 aaKnown RBP29.82■■■□□ 2.36
NDUFV1-223ENST00000532303 SCRIBQ14160 1630 aa29.71■■■□□ 2.35
NDUFV1-223ENST00000532303 CC2D2AQ9P2K1 1620 aa29.5■■■□□ 2.31
NDUFV1-223ENST00000532303 CECR2Q9BXF3 1484 aa29.47■■■□□ 2.31
NDUFV1-223ENST00000532303 EIF4G1Q04637 1599 aaKnown RBP29.29■■■□□ 2.28
NDUFV1-223ENST00000532303 RSF1Q96T23 1441 aaPredicted RBP29.16■■■□□ 2.26
NDUFV1-223ENST00000532303 BAZ1AQ9NRL2 1556 aaPredicted RBP28.9■■■□□ 2.22
NDUFV1-223ENST00000532303 CHIC1Q5VXU3 224 aa28.88■■■□□ 2.21
NDUFV1-223ENST00000532303 DNAJC5Q9H3Z4 198 aa28.88■■■□□ 2.21
NDUFV1-223ENST00000532303 MROH2BQ7Z745 1585 aa28.79■■■□□ 2.2
NDUFV1-223ENST00000532303 SMARCA4P51532 1647 aa28.6■■■□□ 2.17
NDUFV1-223ENST00000532303 WIZO95785 1651 aa28.56■■■□□ 2.16
NDUFV1-223ENST00000532303 TOP2AP11388 1531 aaKnown RBP28.44■■■□□ 2.14
NDUFV1-223ENST00000532303 CUX2O14529 1486 aa28.35■■■□□ 2.13
NDUFV1-223ENST00000532303 PEG3Q9GZU2 1588 aa28.32■■■□□ 2.12
NDUFV1-223ENST00000532303 ERCC6Q03468 1493 aa28.26■■■□□ 2.11
NDUFV1-223ENST00000532303 NCAPD3P42695 1498 aa28.17■■■□□ 2.1
NDUFV1-223ENST00000532303 TRIM41Q8WV44 630 aa28.15■■■□□ 2.1
NDUFV1-223ENST00000532303 SMARCA2P51531 1590 aa28.12■■■□□ 2.09
NDUFV1-223ENST00000532303 CCDC88BA6NC98 1476 aa28.08■■■□□ 2.09
NDUFV1-223ENST00000532303 ATAD2BQ9ULI0 1458 aa28.03■■■□□ 2.08
NDUFV1-223ENST00000532303 HMGXB3Q12766 1538 aa27.93■■■□□ 2.06
NDUFV1-223ENST00000532303 BAZ1BQ9UIG0 1483 aaKnown RBP27.92■■■□□ 2.06
NDUFV1-223ENST00000532303 NESP48681 1621 aa27.92■■■□□ 2.06
NDUFV1-223ENST00000532303 THOC2Q8NI27 1593 aaKnown RBP27.74■■■□□ 2.03
NDUFV1-223ENST00000532303 LOC105371045A0A1W2PR82 267 aa27.65■■■□□ 2.02
NDUFV1-223ENST00000532303 LAMC3Q9Y6N6 1575 aa27.65■■■□□ 2.02
NDUFV1-223ENST00000532303 KIF21AQ7Z4S6 1674 aa27.58■■■□□ 2.01
NDUFV1-223ENST00000532303 EEA1Q15075 1411 aa27.56■■■□□ 2
NDUFV1-223ENST00000532303 ABCC8Q09428 1581 aa27.54■■■□□ 2
NDUFV1-223ENST00000532303 PDS5BQ9NTI5 1447 aa27.5■■□□□ 1.99
NDUFV1-223ENST00000532303 WRNQ14191 1432 aaPredicted RBP eCLIP27.5■■□□□ 1.99
NDUFV1-223ENST00000532303 FAM9AQ8IZU1 332 aaPredicted RBP27.45■■□□□ 1.99
NDUFV1-223ENST00000532303 CADPSQ9ULU8 1353 aa27.3■■□□□ 1.96
NDUFV1-223ENST00000532303 MRC2Q9UBG0 1479 aa27.3■■□□□ 1.96
NDUFV1-223ENST00000532303 CFTRP13569 1480 aa27.26■■□□□ 1.95
NDUFV1-223ENST00000532303 WDR62O43379 1518 aa27.23■■□□□ 1.95
NDUFV1-223ENST00000532303 SYNJ1O43426 1573 aa27.23■■□□□ 1.95
NDUFV1-223ENST00000532303 CSRNP3Q8WYN3 585 aa27.2■■□□□ 1.95
NDUFV1-223ENST00000532303 TOP2BQ02880 1626 aa27.2■■□□□ 1.94
NDUFV1-223ENST00000532303 SOGA1O94964 1423 aa27.18■■□□□ 1.94
NDUFV1-223ENST00000532303 BIVM-ERCC5R4GMW8 1640 aa27.16■■□□□ 1.94
NDUFV1-223ENST00000532303 PRDM2Q13029 1718 aa27.13■■□□□ 1.93
NDUFV1-223ENST00000532303 CEP164Q9UPV0 1460 aa27.1■■□□□ 1.93
NDUFV1-223ENST00000532303 TNIKQ9UKE5 1360 aa27.1■■□□□ 1.93
NDUFV1-223ENST00000532303 TRIM26Q12899 539 aaPredicted RBP27.1■■□□□ 1.93
NDUFV1-223ENST00000532303 GOLGA3Q08378 1498 aa27.08■■□□□ 1.93
NDUFV1-223ENST00000532303 PCGF6Q9BYE7 350 aa27.05■■□□□ 1.92
NDUFV1-223ENST00000532303 KIF21BO75037 1637 aa27.03■■□□□ 1.92
NDUFV1-223ENST00000532303 FANCD2Q9BXW9 1451 aa27.02■■□□□ 1.92
NDUFV1-223ENST00000532303 OSCARQ8IYS5 282 aa26.98■■□□□ 1.91
NDUFV1-223ENST00000532303 RUSC2Q8N2Y8 1516 aa26.96■■□□□ 1.91
NDUFV1-223ENST00000532303 EHMT2Q96KQ7 1210 aa26.91■■□□□ 1.9
NDUFV1-223ENST00000532303 CUX1P39880 1505 aa26.91■■□□□ 1.9
NDUFV1-223ENST00000532303 CEP162Q5TB80 1403 aa26.9■■□□□ 1.9
NDUFV1-223ENST00000532303 UBTFP17480 764 aaKnown RBP26.87■■□□□ 1.89
NDUFV1-223ENST00000532303 KIF27Q86VH2 1401 aa26.82■■□□□ 1.88
NDUFV1-223ENST00000532303 URB2Q14146 1524 aaKnown RBP26.81■■□□□ 1.88
NDUFV1-223ENST00000532303 ERICH3Q5RHP9 1530 aa26.8■■□□□ 1.88
NDUFV1-223ENST00000532303 HRCP23327 699 aa26.8■■□□□ 1.88
NDUFV1-223ENST00000532303 RIMBP3CA6NJZ7 1639 aa26.7■■□□□ 1.87
NDUFV1-223ENST00000532303 RIMBP3BA6NNM3 1639 aa26.7■■□□□ 1.87
NDUFV1-223ENST00000532303 RIMBP3Q9UFD9 1639 aa26.7■■□□□ 1.87
NDUFV1-223ENST00000532303 PRXQ9BXM0 1461 aa26.7■■□□□ 1.86
NDUFV1-223ENST00000532303 RAPGEF2Q9Y4G8 1499 aa26.64■■□□□ 1.85
NDUFV1-223ENST00000532303 DNMBPQ6XZF7 1577 aa26.62■■□□□ 1.85
NDUFV1-223ENST00000532303 CLIP1P30622 1438 aa26.61■■□□□ 1.85
NDUFV1-223ENST00000532303 FGD5Q6ZNL6 1462 aa26.58■■□□□ 1.85
NDUFV1-223ENST00000532303 ZNF608Q9ULD9 1512 aaPredicted RBP26.57■■□□□ 1.84
NDUFV1-223ENST00000532303 IFT140Q96RY7 1462 aa26.56■■□□□ 1.84
NDUFV1-223ENST00000532303 ARHGEF11O15085 1522 aa26.54■■□□□ 1.84
NDUFV1-223ENST00000532303 ZEB1P37275 1124 aaPredicted RBP26.5■■□□□ 1.83
NDUFV1-223ENST00000532303 TOPBP1Q92547 1522 aa26.49■■□□□ 1.83
NDUFV1-223ENST00000532303 VPS8Q8N3P4 1428 aa26.48■■□□□ 1.83
NDUFV1-223ENST00000532303 ABCA10Q8WWZ4 1543 aa26.44■■□□□ 1.82
NDUFV1-223ENST00000532303 IGF1RP08069 1367 aa26.42■■□□□ 1.82
NDUFV1-223ENST00000532303 EIF4G3O43432 1585 aaKnown RBP26.42■■□□□ 1.82
NDUFV1-223ENST00000532303 CYB5RLQ6IPT4 315 aa26.39■■□□□ 1.82
NDUFV1-223ENST00000532303 POLA1P09884 1462 aaPredicted RBP26.37■■□□□ 1.81
NDUFV1-223ENST00000532303 APLP2Q06481 763 aa26.36■■□□□ 1.81
NDUFV1-223ENST00000532303 CARMIL1Q5VZK9 1371 aa26.35■■□□□ 1.81
NDUFV1-223ENST00000532303 CHD1O14646 1710 aa26.34■■□□□ 1.81
NDUFV1-223ENST00000532303 TRHP20396 242 aaPredicted RBP26.29■■□□□ 1.8
NDUFV1-223ENST00000532303 CUL7Q14999 1698 aa26.27■■□□□ 1.8
NDUFV1-223ENST00000532303 AQRO60306 1485 aaKnown RBP eCLIP26.26■■□□□ 1.795e-7■■■■□ 25.2
NDUFV1-223ENST00000532303 ARAP1Q96P48 1450 aa26.25■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms