RNA–Protein interactions for RNA: ENST00000466396.5

CLTA-206, Transcript of clathrin light chain A, humanhuman

TSL 2 BASIC

Gene CLTA, Length 695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-206ENST00000466396 NISCHQ9Y2I1 1504 aa55.73■■■■■ 6.51
CLTA-206ENST00000466396 CCDC180Q9P1Z9 1646 aa49.46■■■■■ 5.51
CLTA-206ENST00000466396 ABCC9O60706 1549 aa48.35■■■■■ 5.33
CLTA-206ENST00000466396 RB1CC1Q8TDY2 1594 aa46.49■■■■■ 5.03
CLTA-206ENST00000466396 NACADO15069 1562 aa46.47■■■■■ 5.03
CLTA-206ENST00000466396 DCAF8L2P0C7V8 631 aa46.47■■■■■ 5.03
CLTA-206ENST00000466396 ZCCHC6Q5VYS8 1495 aaKnown RBP46.44■■■■■ 5.02
CLTA-206ENST00000466396 MYO15BQ96JP2 1530 aa46.23■■■■■ 4.99
CLTA-206ENST00000466396 DCAF1Q9Y4B6 1507 aa46.08■■■■■ 4.97
CLTA-206ENST00000466396 UNC13AQ9UPW8 1703 aa45.55■■■■■ 4.88
CLTA-206ENST00000466396 PABPN1Q86U42 306 aaKnown RBP eCLIP45.22■■■■■ 4.83
CLTA-206ENST00000466396 BICRAQ9NZM4 1560 aa45.2■■■■■ 4.83
CLTA-206ENST00000466396 SCRIBQ14160 1630 aa45.17■■■■■ 4.82
CLTA-206ENST00000466396 SHROOM4Q9ULL8 1493 aa44.59■■■■■ 4.73
CLTA-206ENST00000466396 DNAJC5BQ9UF47 199 aa44.41■■■■■ 4.7
CLTA-206ENST00000466396 EIF4G1Q04637 1599 aaKnown RBP43.93■■■■■ 4.62
CLTA-206ENST00000466396 CC2D2AQ9P2K1 1620 aa43.74■■■■■ 4.59
CLTA-206ENST00000466396 CECR2Q9BXF3 1484 aa43.46■■■■■ 4.55
CLTA-206ENST00000466396 SMARCA4P51532 1647 aa43.22■■■■■ 4.51
CLTA-206ENST00000466396 BAZ1AQ9NRL2 1556 aaPredicted RBP43.14■■■■■ 4.5
CLTA-206ENST00000466396 MROH2BQ7Z745 1585 aa42.99■■■■■ 4.47
CLTA-206ENST00000466396 ATAD2BQ9ULI0 1458 aa42.97■■■■■ 4.47
CLTA-206ENST00000466396 NCAPD3P42695 1498 aa42.93■■■■■ 4.46
CLTA-206ENST00000466396 SMARCA2P51531 1590 aa42.86■■■■■ 4.45
CLTA-206ENST00000466396 PEG3Q9GZU2 1588 aa42.8■■■■■ 4.44
CLTA-206ENST00000466396 HMGXB3Q12766 1538 aa42.69■■■■■ 4.42
CLTA-206ENST00000466396 BAZ1BQ9UIG0 1483 aaKnown RBP42.57■■■■■ 4.41
CLTA-206ENST00000466396 WIZO95785 1651 aa42.53■■■■■ 4.4
CLTA-206ENST00000466396 RSF1Q96T23 1441 aaPredicted RBP42.52■■■■■ 4.4
CLTA-206ENST00000466396 TOP2AP11388 1531 aaKnown RBP42.03■■■■■ 4.32
CLTA-206ENST00000466396 NESP48681 1621 aa41.91■■■■■ 4.3
CLTA-206ENST00000466396 LAMC3Q9Y6N6 1575 aa41.73■■■■■ 4.27
CLTA-206ENST00000466396 CADPSQ9ULU8 1353 aa41.66■■■■■ 4.26
CLTA-206ENST00000466396 ERCC6Q03468 1493 aa41.59■■■■■ 4.25
CLTA-206ENST00000466396 CCDC88BA6NC98 1476 aa41.58■■■■■ 4.25
CLTA-206ENST00000466396 SUPT5HO00267 1087 aaKnown RBP41.46■■■■■ 4.23
CLTA-206ENST00000466396 CFTRP13569 1480 aa41.45■■■■■ 4.23
CLTA-206ENST00000466396 PDS5BQ9NTI5 1447 aa41.43■■■■■ 4.22
CLTA-206ENST00000466396 KIF21AQ7Z4S6 1674 aa41.39■■■■■ 4.22
CLTA-206ENST00000466396 THOC2Q8NI27 1593 aaKnown RBP41.23■■■■■ 4.19
CLTA-206ENST00000466396 FANCD2Q9BXW9 1451 aa41.18■■■■■ 4.18
CLTA-206ENST00000466396 CUX2O14529 1486 aa41.14■■■■■ 4.18
CLTA-206ENST00000466396 PRDM2Q13029 1718 aa41.13■■■■■ 4.17
CLTA-206ENST00000466396 CEP164Q9UPV0 1460 aa41.09■■■■■ 4.17
CLTA-206ENST00000466396 MRC2Q9UBG0 1479 aa41.03■■■■■ 4.16
CLTA-206ENST00000466396 WDR62O43379 1518 aa40.92■■■■■ 4.14
CLTA-206ENST00000466396 URB2Q14146 1524 aaKnown RBP40.82■■■■■ 4.12
CLTA-206ENST00000466396 TOPBP1Q92547 1522 aa40.56■■■■■ 4.08
CLTA-206ENST00000466396 DNMBPQ6XZF7 1577 aa40.48■■■■■ 4.07
CLTA-206ENST00000466396 ABCC8Q09428 1581 aa40.48■■■■■ 4.07
CLTA-206ENST00000466396 CUX1P39880 1505 aa40.32■■■■■ 4.04
CLTA-206ENST00000466396 IFT140Q96RY7 1462 aa40.23■■■■■ 4.03
CLTA-206ENST00000466396 POLA1P09884 1462 aaPredicted RBP40.21■■■■■ 4.03
CLTA-206ENST00000466396 TARBP1Q13395 1621 aaKnown RBP40.13■■■■■ 4.02
CLTA-206ENST00000466396 FGD5Q6ZNL6 1462 aa40.13■■■■■ 4.01
CLTA-206ENST00000466396 ZNF608Q9ULD9 1512 aaPredicted RBP40.12■■■■■ 4.01
CLTA-206ENST00000466396 RAD54L2Q9Y4B4 1467 aa40.07■■■■■ 4.01
CLTA-206ENST00000466396 SOGA1O94964 1423 aa40.04■■■■■ 4
CLTA-206ENST00000466396 WRNQ14191 1432 aaPredicted RBP eCLIP40.03■■■■■ 4
CLTA-206ENST00000466396 SYNJ1O43426 1573 aa39.98■■■■□ 3.99
CLTA-206ENST00000466396 BIVM-ERCC5R4GMW8 1640 aa39.96■■■■□ 3.99
CLTA-206ENST00000466396 TOP2BQ02880 1626 aa39.95■■■■□ 3.99
CLTA-206ENST00000466396 EIF4G3O43432 1585 aaKnown RBP39.93■■■■□ 3.98
CLTA-206ENST00000466396 AQRO60306 1485 aaKnown RBP eCLIP39.89■■■■□ 3.98
CLTA-206ENST00000466396 DNAJC5Q9H3Z4 198 aa39.83■■■■□ 3.97
CLTA-206ENST00000466396 TDRD9Q8NDG6 1382 aaKnown RBP39.83■■■■□ 3.97
CLTA-206ENST00000466396 WDR97A6NE52 1622 aa39.82■■■■□ 3.96
CLTA-206ENST00000466396 ABCA10Q8WWZ4 1543 aa39.74■■■■□ 3.95
CLTA-206ENST00000466396 ABCA5Q8WWZ7 1642 aa39.59■■■■□ 3.93
CLTA-206ENST00000466396 GAPVD1Q14C86 1478 aa39.56■■■■□ 3.92
CLTA-206ENST00000466396 GRIN2BQ13224 1484 aa39.54■■■■□ 3.92
CLTA-206ENST00000466396 SNAPC4Q5SXM2 1469 aa39.49■■■■□ 3.91
CLTA-206ENST00000466396 PBRM1Q86U86 1689 aa39.49■■■■□ 3.91
CLTA-206ENST00000466396 OSCARQ8IYS5 282 aa39.46■■■■□ 3.91
CLTA-206ENST00000466396 CHD1O14646 1710 aa39.42■■■■□ 3.9
CLTA-206ENST00000466396 MAGI1Q96QZ7 1491 aaPredicted RBP39.42■■■■□ 3.9
CLTA-206ENST00000466396 FBLN2P98095 1184 aa39.32■■■■□ 3.89
CLTA-206ENST00000466396 SYNJ2O15056 1496 aa39.27■■■■□ 3.88
CLTA-206ENST00000466396 ERICH3Q5RHP9 1530 aa39.24■■■■□ 3.87
CLTA-206ENST00000466396 CHMP7Q8WUX9 453 aaPredicted RBP39.22■■■■□ 3.87
CLTA-206ENST00000466396 ADAMTS12P58397 1594 aa39.19■■■■□ 3.86
CLTA-206ENST00000466396 KIF27Q86VH2 1401 aa39.16■■■■□ 3.86
CLTA-206ENST00000466396 TRIM41Q8WV44 630 aa39.12■■■■□ 3.85
CLTA-206ENST00000466396 FHAD1B1AJZ9 1412 aa39.11■■■■□ 3.85
CLTA-206ENST00000466396 IGF1RP08069 1367 aa39.07■■■■□ 3.84
CLTA-206ENST00000466396 GRIN2AQ12879 1464 aa39.05■■■■□ 3.84
CLTA-206ENST00000466396 CLASP1Q7Z460 1538 aa39■■■■□ 3.83
CLTA-206ENST00000466396 RUSC2Q8N2Y8 1516 aa38.97■■■■□ 3.83
CLTA-206ENST00000466396 CEP170Q5SW79 1584 aa38.89■■■■□ 3.82
CLTA-206ENST00000466396 NUP160Q12769 1436 aa38.89■■■■□ 3.82
CLTA-206ENST00000466396 CUL7Q14999 1698 aa38.88■■■■□ 3.81
CLTA-206ENST00000466396 RIMBP3CA6NJZ7 1639 aa38.87■■■■□ 3.81
CLTA-206ENST00000466396 RIMBP3BA6NNM3 1639 aa38.87■■■■□ 3.81
CLTA-206ENST00000466396 RIMBP3Q9UFD9 1639 aa38.87■■■■□ 3.81
CLTA-206ENST00000466396 ARHGEF11O15085 1522 aa38.85■■■■□ 3.81
CLTA-206ENST00000466396 CARMIL1Q5VZK9 1371 aa38.8■■■■□ 3.8
CLTA-206ENST00000466396 CHIC1Q5VXU3 224 aa38.79■■■■□ 3.8
CLTA-206ENST00000466396 SHROOM2Q13796 1616 aa38.6■■■■□ 3.77
CLTA-206ENST00000466396 ARAP1Q96P48 1450 aa38.57■■■■□ 3.76
CLTA-206ENST00000466396 RAPGEF2Q9Y4G8 1499 aa38.56■■■■□ 3.76
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms