RNA–Protein interactions for RNA: ENST00000242285.10

CLTA-201, Transcript of clathrin light chain A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLTA, Length 1,152 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-201ENST00000242285 NISCHQ9Y2I1 1504 aa41.21■■■■■ 4.19
CLTA-201ENST00000242285 CCDC180Q9P1Z9 1646 aa36.88■■■■□ 3.49
CLTA-201ENST00000242285 ABCC9O60706 1549 aa36.62■■■■□ 3.45
CLTA-201ENST00000242285 RB1CC1Q8TDY2 1594 aa35.01■■■■□ 3.2
CLTA-201ENST00000242285 NACADO15069 1562 aa34.81■■■■□ 3.16
CLTA-201ENST00000242285 MYO15BQ96JP2 1530 aa34.45■■■■□ 3.1
CLTA-201ENST00000242285 DCAF8L2P0C7V8 631 aa34.33■■■■□ 3.09
CLTA-201ENST00000242285 DNAJC5BQ9UF47 199 aa34.3■■■■□ 3.08
CLTA-201ENST00000242285 ZCCHC6Q5VYS8 1495 aaKnown RBP34.3■■■■□ 3.08
CLTA-201ENST00000242285 DCAF1Q9Y4B6 1507 aa34.2■■■■□ 3.07
CLTA-201ENST00000242285 UNC13AQ9UPW8 1703 aa34.07■■■■□ 3.05
CLTA-201ENST00000242285 PABPN1Q86U42 306 aaKnown RBP eCLIP34.03■■■■□ 3.04
CLTA-201ENST00000242285 BICRAQ9NZM4 1560 aa33.92■■■■□ 3.02
CLTA-201ENST00000242285 SHROOM4Q9ULL8 1493 aa33.72■■■□□ 2.99
CLTA-201ENST00000242285 SCRIBQ14160 1630 aa33.43■■■□□ 2.94
CLTA-201ENST00000242285 CC2D2AQ9P2K1 1620 aa33.14■■■□□ 2.9
CLTA-201ENST00000242285 EIF4G1Q04637 1599 aaKnown RBP33.12■■■□□ 2.89
CLTA-201ENST00000242285 CECR2Q9BXF3 1484 aa33.06■■■□□ 2.88
CLTA-201ENST00000242285 NCAPD3P42695 1498 aa32.13■■■□□ 2.73
CLTA-201ENST00000242285 SMARCA4P51532 1647 aa32.05■■■□□ 2.72
CLTA-201ENST00000242285 BAZ1AQ9NRL2 1556 aaPredicted RBP31.98■■■□□ 2.71
CLTA-201ENST00000242285 ATAD2BQ9ULI0 1458 aa31.97■■■□□ 2.71
CLTA-201ENST00000242285 SMARCA2P51531 1590 aa31.94■■■□□ 2.7
CLTA-201ENST00000242285 HMGXB3Q12766 1538 aa31.9■■■□□ 2.7
CLTA-201ENST00000242285 PEG3Q9GZU2 1588 aa31.81■■■□□ 2.68
CLTA-201ENST00000242285 CUX2O14529 1486 aa31.75■■■□□ 2.67
CLTA-201ENST00000242285 MROH2BQ7Z745 1585 aa31.69■■■□□ 2.66
CLTA-201ENST00000242285 ERCC6Q03468 1493 aa31.68■■■□□ 2.66
CLTA-201ENST00000242285 BAZ1BQ9UIG0 1483 aaKnown RBP31.65■■■□□ 2.66
CLTA-201ENST00000242285 DNAJC5Q9H3Z4 198 aa31.63■■■□□ 2.65
CLTA-201ENST00000242285 NESP48681 1621 aa31.44■■■□□ 2.62
CLTA-201ENST00000242285 LAMC3Q9Y6N6 1575 aa31.4■■■□□ 2.62
CLTA-201ENST00000242285 WIZO95785 1651 aa31.38■■■□□ 2.61
CLTA-201ENST00000242285 RSF1Q96T23 1441 aaPredicted RBP31.25■■■□□ 2.59
CLTA-201ENST00000242285 THOC2Q8NI27 1593 aaKnown RBP31.23■■■□□ 2.59
CLTA-201ENST00000242285 PDS5BQ9NTI5 1447 aa31.22■■■□□ 2.59
CLTA-201ENST00000242285 CADPSQ9ULU8 1353 aa31.12■■■□□ 2.57
CLTA-201ENST00000242285 TOP2AP11388 1531 aaKnown RBP31.07■■■□□ 2.56
CLTA-201ENST00000242285 KIF21AQ7Z4S6 1674 aa31.06■■■□□ 2.56
CLTA-201ENST00000242285 MRC2Q9UBG0 1479 aa30.91■■■□□ 2.54
CLTA-201ENST00000242285 WDR62O43379 1518 aa30.86■■■□□ 2.53
CLTA-201ENST00000242285 CFTRP13569 1480 aa30.78■■■□□ 2.52
CLTA-201ENST00000242285 CEP164Q9UPV0 1460 aa30.77■■■□□ 2.52
CLTA-201ENST00000242285 FANCD2Q9BXW9 1451 aa30.72■■■□□ 2.51
CLTA-201ENST00000242285 PRDM2Q13029 1718 aa30.71■■■□□ 2.51
CLTA-201ENST00000242285 CCDC88BA6NC98 1476 aa30.63■■■□□ 2.49
CLTA-201ENST00000242285 URB2Q14146 1524 aaKnown RBP30.44■■■□□ 2.46
CLTA-201ENST00000242285 OSCARQ8IYS5 282 aa30.21■■■□□ 2.43
CLTA-201ENST00000242285 ABCC8Q09428 1581 aa30.2■■■□□ 2.43
CLTA-201ENST00000242285 IFT140Q96RY7 1462 aa30.2■■■□□ 2.43
CLTA-201ENST00000242285 TOPBP1Q92547 1522 aa30.14■■■□□ 2.42
CLTA-201ENST00000242285 SUPT5HO00267 1087 aaKnown RBP30.14■■■□□ 2.42
CLTA-201ENST00000242285 TRIM41Q8WV44 630 aa30.08■■■□□ 2.41
CLTA-201ENST00000242285 DNMBPQ6XZF7 1577 aa30.07■■■□□ 2.4
CLTA-201ENST00000242285 ZNF608Q9ULD9 1512 aaPredicted RBP30.02■■■□□ 2.4
CLTA-201ENST00000242285 EIF4G3O43432 1585 aaKnown RBP29.91■■■□□ 2.38
CLTA-201ENST00000242285 TARBP1Q13395 1621 aaKnown RBP29.88■■■□□ 2.37
CLTA-201ENST00000242285 POLA1P09884 1462 aaPredicted RBP29.83■■■□□ 2.37
CLTA-201ENST00000242285 RIMBP3CA6NJZ7 1639 aa29.77■■■□□ 2.36
CLTA-201ENST00000242285 RIMBP3BA6NNM3 1639 aa29.77■■■□□ 2.36
CLTA-201ENST00000242285 RIMBP3Q9UFD9 1639 aa29.77■■■□□ 2.36
CLTA-201ENST00000242285 CUX1P39880 1505 aa29.76■■■□□ 2.36
CLTA-201ENST00000242285 AQRO60306 1485 aaKnown RBP eCLIP29.75■■■□□ 2.35
CLTA-201ENST00000242285 WDR97A6NE52 1622 aa29.74■■■□□ 2.35
CLTA-201ENST00000242285 ARHGEF11O15085 1522 aa29.71■■■□□ 2.35
CLTA-201ENST00000242285 SOGA1O94964 1423 aa29.69■■■□□ 2.34
CLTA-201ENST00000242285 FGD5Q6ZNL6 1462 aa29.68■■■□□ 2.34
CLTA-201ENST00000242285 RAD54L2Q9Y4B4 1467 aa29.64■■■□□ 2.34
CLTA-201ENST00000242285 CHD1O14646 1710 aa29.62■■■□□ 2.33
CLTA-201ENST00000242285 BIVM-ERCC5R4GMW8 1640 aa29.56■■■□□ 2.32
CLTA-201ENST00000242285 TDRD9Q8NDG6 1382 aaKnown RBP29.56■■■□□ 2.32
CLTA-201ENST00000242285 TOP2BQ02880 1626 aa29.53■■■□□ 2.32
CLTA-201ENST00000242285 MAGI1Q96QZ7 1491 aaPredicted RBP29.52■■■□□ 2.32
CLTA-201ENST00000242285 FBLN2P98095 1184 aa29.49■■■□□ 2.31
CLTA-201ENST00000242285 SNAPC4Q5SXM2 1469 aa29.48■■■□□ 2.31
CLTA-201ENST00000242285 WRNQ14191 1432 aaPredicted RBP eCLIP29.48■■■□□ 2.31
CLTA-201ENST00000242285 GRIN2BQ13224 1484 aa29.48■■■□□ 2.31
CLTA-201ENST00000242285 SYNJ1O43426 1573 aa29.45■■■□□ 2.31
CLTA-201ENST00000242285 ABCA10Q8WWZ4 1543 aa29.45■■■□□ 2.3
CLTA-201ENST00000242285 ARAP1Q96P48 1450 aa29.41■■■□□ 2.3
CLTA-201ENST00000242285 CYB5RLQ6IPT4 315 aa29.4■■■□□ 2.3
CLTA-201ENST00000242285 CLASP1Q7Z460 1538 aa29.4■■■□□ 2.3
CLTA-201ENST00000242285 SYNJ2O15056 1496 aa29.39■■■□□ 2.3
CLTA-201ENST00000242285 PBRM1Q86U86 1689 aa29.39■■■□□ 2.3
CLTA-201ENST00000242285 ABCA5Q8WWZ7 1642 aa29.38■■■□□ 2.29
CLTA-201ENST00000242285 CHMP7Q8WUX9 453 aaPredicted RBP29.38■■■□□ 2.29
CLTA-201ENST00000242285 GAPVD1Q14C86 1478 aa29.35■■■□□ 2.29
CLTA-201ENST00000242285 ERICH3Q5RHP9 1530 aa29.12■■■□□ 2.25
CLTA-201ENST00000242285 ADAMTS12P58397 1594 aa29.09■■■□□ 2.25
CLTA-201ENST00000242285 GRIN2AQ12879 1464 aa29.08■■■□□ 2.25
CLTA-201ENST00000242285 TRHP20396 242 aaPredicted RBP29.06■■■□□ 2.24
CLTA-201ENST00000242285 NUP160Q12769 1436 aa29.02■■■□□ 2.24
CLTA-201ENST00000242285 FHAD1B1AJZ9 1412 aa29.01■■■□□ 2.23
CLTA-201ENST00000242285 CEP170Q5SW79 1584 aa28.92■■■□□ 2.22
CLTA-201ENST00000242285 KIF27Q86VH2 1401 aa28.89■■■□□ 2.22
CLTA-201ENST00000242285 SHROOM2Q13796 1616 aa28.87■■■□□ 2.21
CLTA-201ENST00000242285 CUL7Q14999 1698 aa28.86■■■□□ 2.21
CLTA-201ENST00000242285 ERCC6L2Q5T890 1561 aa28.8■■■□□ 2.2
CLTA-201ENST00000242285 IGF1RP08069 1367 aa28.77■■■□□ 2.2
CLTA-201ENST00000242285 RUSC2Q8N2Y8 1516 aa28.67■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms