RNA–Protein interactions for RNA: ENST00000461283.5

RBM39-221, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 2,415 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-221ENST00000461283 AEBP2Q6ZN18 517 aaPredicted RBP8.83□□□□□ -1
RBM39-221ENST00000461283 CHIC1Q5VXU3 224 aa8.76□□□□□ -1.01
RBM39-221ENST00000461283 PHF23Q9BUL5 403 aaPredicted RBP7.79□□□□□ -1.16
RBM39-221ENST00000461283 SENP3Q9H4L4 574 aaPredicted RBP7.37□□□□□ -1.23
RBM39-221ENST00000461283 EHMT2Q96KQ7 1210 aa7.29□□□□□ -1.24
RBM39-221ENST00000461283 PLPPR3Q6T4P5 718 aa7.19□□□□□ -1.26
RBM39-221ENST00000461283 KCNA4P22459 653 aa6.96□□□□□ -1.3
RBM39-221ENST00000461283 FOXD1Q16676 465 aa6.87□□□□□ -1.31
RBM39-221ENST00000461283 SLC24A1O60721 1099 aa6.86□□□□□ -1.31
RBM39-221ENST00000461283 ADRA2BP18089 450 aa6.85□□□□□ -1.31
RBM39-221ENST00000461283 PPP6R1Q9UPN7 881 aa6.82□□□□□ -1.32
RBM39-221ENST00000461283 CSRNP3Q8WYN3 585 aa6.81□□□□□ -1.32
RBM39-221ENST00000461283 RTN4Q9NQC3 1192 aaKnown RBP6.66□□□□□ -1.34
RBM39-221ENST00000461283 SLC4A1APQ9BWU0 796 aaKnown RBP6.61□□□□□ -1.35
RBM39-221ENST00000461283 DNAJC5Q9H3Z4 198 aa6.56□□□□□ -1.36
RBM39-221ENST00000461283 PIAS4Q8N2W9 510 aaPredicted RBP6.53□□□□□ -1.36
RBM39-221ENST00000461283 ZBTB22O15209 634 aa6.46□□□□□ -1.38
RBM39-221ENST00000461283 PPP4R3CPQ6ZMV5 832 aa6.38□□□□□ -1.39
RBM39-221ENST00000461283 AMER1Q5JTC6 1135 aaPredicted RBP6.38□□□□□ -1.39
RBM39-221ENST00000461283 NISCHQ9Y2I1 1504 aa6.29□□□□□ -1.4
RBM39-221ENST00000461283 NPM3O75607 178 aaKnown RBP6.28□□□□□ -1.4
RBM39-221ENST00000461283 MSH5O43196 834 aa6.26□□□□□ -1.41
RBM39-221ENST00000461283 PRKCSHP14314 528 aaPredicted RBP6.23□□□□□ -1.41
RBM39-221ENST00000461283 NCBP3Q53F19 620 aaKnown RBP6.22□□□□□ -1.41
RBM39-221ENST00000461283 POTEDQ86YR6 584 aa6.2□□□□□ -1.42
RBM39-221ENST00000461283 DNAJC5BQ9UF47 199 aa6.18□□□□□ -1.42
RBM39-221ENST00000461283 FKBP8Q14318 412 aa6.14□□□□□ -1.43
RBM39-221ENST00000461283 MAPK8IP2Q13387 824 aaPredicted RBP6.13□□□□□ -1.43
RBM39-221ENST00000461283 CNKSR2Q8WXI2 1034 aa6.13□□□□□ -1.43
RBM39-221ENST00000461283 SCAF1Q9H7N4 1312 aaKnown RBP6.12□□□□□ -1.43
RBM39-221ENST00000461283 FOXD4L1Q9NU39 408 aa6.06□□□□□ -1.44
RBM39-221ENST00000461283 RNF216Q9NWF9 866 aaPredicted RBP5.96□□□□□ -1.45
RBM39-221ENST00000461283 HAP1P54257 671 aaPredicted RBP5.96□□□□□ -1.46
RBM39-221ENST00000461283 PLCB2Q00722 1185 aa5.96□□□□□ -1.46
RBM39-221ENST00000461283 TAOK2Q9UL54 1235 aa5.96□□□□□ -1.46
RBM39-221ENST00000461283 CCDC180Q9P1Z9 1646 aa5.94□□□□□ -1.46
RBM39-221ENST00000461283 DMRT2Q9Y5R5 561 aa5.93□□□□□ -1.46
RBM39-221ENST00000461283 TPRNQ4KMQ1 711 aa5.92□□□□□ -1.46
RBM39-221ENST00000461283 HOXD11P31277 338 aaPredicted RBP5.89□□□□□ -1.47
RBM39-221ENST00000461283 DCAF8L2P0C7V8 631 aa5.88□□□□□ -1.47
RBM39-221ENST00000461283 BCANQ96GW7 911 aa5.87□□□□□ -1.47
RBM39-221ENST00000461283 TIMELESSQ9UNS1 1208 aa5.87□□□□□ -1.47
RBM39-221ENST00000461283 ABCC9O60706 1549 aa5.85□□□□□ -1.47
RBM39-221ENST00000461283 TULP1O00294 542 aaPredicted RBP5.83□□□□□ -1.48
RBM39-221ENST00000461283 SLC4A2P04920 1241 aa5.83□□□□□ -1.48
RBM39-221ENST00000461283 FBLN2P98095 1184 aa5.82□□□□□ -1.48
RBM39-221ENST00000461283 KDM2AQ9Y2K7 1162 aa5.8□□□□□ -1.48
RBM39-221ENST00000461283 DAXXQ9UER7 740 aaPredicted RBP5.76□□□□□ -1.49
RBM39-221ENST00000461283 ATF5Q9Y2D1 282 aaPredicted RBP5.74□□□□□ -1.49
RBM39-221ENST00000461283 DCAF8L1A6NGE4 600 aa5.7□□□□□ -1.5
RBM39-221ENST00000461283 CUX2O14529 1486 aa5.69□□□□□ -1.5
RBM39-221ENST00000461283 MYCNP04198 464 aaPredicted RBP5.69□□□□□ -1.5
RBM39-221ENST00000461283 TRIM41Q8WV44 630 aa5.69□□□□□ -1.5
RBM39-221ENST00000461283 RB1CC1Q8TDY2 1594 aa5.69□□□□□ -1.5
RBM39-221ENST00000461283 ILDR1Q86SU0 546 aaPredicted RBP5.68□□□□□ -1.5
RBM39-221ENST00000461283 VSIG10Q8N0Z9 540 aa5.68□□□□□ -1.5
RBM39-221ENST00000461283 CFAP44Q96MT7 982 aa5.66□□□□□ -1.5
RBM39-221ENST00000461283 PKD2Q13563 968 aa5.65□□□□□ -1.51
RBM39-221ENST00000461283 PAXIP1Q6ZW49 1069 aaPredicted RBP5.65□□□□□ -1.51
RBM39-221ENST00000461283 GTF3C3Q9Y5Q9 886 aa5.64□□□□□ -1.51
RBM39-221ENST00000461283 IFNLR1Q8IU57 520 aaPredicted RBP5.64□□□□□ -1.51
RBM39-221ENST00000461283 SHROOM4Q9ULL8 1493 aa5.64□□□□□ -1.51
RBM39-221ENST00000461283 NACADO15069 1562 aa5.63□□□□□ -1.51
RBM39-221ENST00000461283 NPM1P06748 294 aaKnown RBP eCLIP5.63□□□□□ -1.51
RBM39-221ENST00000461283 ATXN8OSP0DMR3 200 aa5.63□□□□□ -1.51
RBM39-221ENST00000461283 GRWD1Q9BQ67 446 aaKnown RBP eCLIP5.61□□□□□ -1.514e-13■■□□□ 11.5
RBM39-221ENST00000461283 TSHZ2Q9NRE2 1034 aa5.61□□□□□ -1.51
RBM39-221ENST00000461283 ARXQ96QS3 562 aa5.6□□□□□ -1.51
RBM39-221ENST00000461283 MYO15BQ96JP2 1530 aa5.59□□□□□ -1.52
RBM39-221ENST00000461283 U3KPZ7 1027 aaPredicted RBP5.58□□□□□ -1.52
RBM39-221ENST00000461283 VASPP50552 380 aaPredicted RBP5.57□□□□□ -1.52
RBM39-221ENST00000461283 ZBTB4Q9P1Z0 1013 aaPredicted RBP5.52□□□□□ -1.53
RBM39-221ENST00000461283 FBXO3Q9UK99 471 aa5.52□□□□□ -1.53
RBM39-221ENST00000461283 TMEM132AQ24JP5 1023 aa5.51□□□□□ -1.53
RBM39-221ENST00000461283 SPDYE4A6NLX3 237 aa5.5□□□□□ -1.53
RBM39-221ENST00000461283 SUPT5HO00267 1087 aaKnown RBP5.5□□□□□ -1.53
RBM39-221ENST00000461283 SAMD1Q6SPF0 538 aaPredicted RBP5.5□□□□□ -1.53
RBM39-221ENST00000461283 HOMEZQ8IX15 550 aa5.5□□□□□ -1.53
RBM39-221ENST00000461283 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP5.49□□□□□ -1.53
RBM39-221ENST00000461283 HNRNPUL2Q1KMD3 747 aaKnown RBP5.49□□□□□ -1.53
RBM39-221ENST00000461283 C14orf37Q86TY3 774 aa5.49□□□□□ -1.53
RBM39-221ENST00000461283 BBXQ8WY36 941 aaPredicted RBP5.49□□□□□ -1.53
RBM39-221ENST00000461283 RGL2O15211 777 aa5.48□□□□□ -1.53
RBM39-221ENST00000461283 NBR1Q14596 966 aa5.48□□□□□ -1.53
RBM39-221ENST00000461283 CECR2Q9BXF3 1484 aa5.47□□□□□ -1.53
RBM39-221ENST00000461283 SOCS7O14512 581 aa5.46□□□□□ -1.53
RBM39-221ENST00000461283 ECM2O94769 699 aaPredicted RBP5.46□□□□□ -1.53
RBM39-221ENST00000461283 PODXL2Q9NZ53 605 aa5.46□□□□□ -1.53
RBM39-221ENST00000461283 SPRYD3Q8NCJ5 442 aa5.46□□□□□ -1.54
RBM39-221ENST00000461283 UNC13AQ9UPW8 1703 aa5.43□□□□□ -1.54
RBM39-221ENST00000461283 MKRN4PQ13434 485 aaPredicted RBP5.43□□□□□ -1.54
RBM39-221ENST00000461283 PABPN1Q86U42 306 aaKnown RBP eCLIP5.43□□□□□ -1.541e-8■□□□□ 11.3
RBM39-221ENST00000461283 ZNF219Q9P2Y4 722 aaPredicted RBP5.43□□□□□ -1.54
RBM39-221ENST00000461283 CHGAP10645 457 aaKnown RBP5.42□□□□□ -1.54
RBM39-221ENST00000461283 KLHL34Q8N239 644 aa5.4□□□□□ -1.55
RBM39-221ENST00000461283 LMTK3Q96Q04 1460 aa5.4□□□□□ -1.55
RBM39-221ENST00000461283 CACNB1Q02641 598 aaPredicted RBP5.39□□□□□ -1.55
RBM39-221ENST00000461283 BICRAQ9NZM4 1560 aa5.39□□□□□ -1.55
RBM39-221ENST00000461283 SPINK5Q9NQ38 1064 aaPredicted RBP5.39□□□□□ -1.55
RBM39-221ENST00000461283 DCAF1Q9Y4B6 1507 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms