RNA–Protein interactions for RNA: ENST00000535458.6

KPNB1-202, Transcript of karyopherin subunit beta 1, humanhuman

TSL 2 BASIC

Gene KPNB1, Length 3,163 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-202ENST00000535458 NISCHQ9Y2I1 1504 aa18.14■□□□□ 0.49
KPNB1-202ENST00000535458 SHROOM4Q9ULL8 1493 aa15.53■□□□□ 0.08
KPNB1-202ENST00000535458 CCDC180Q9P1Z9 1646 aa15.52■□□□□ 0.08
KPNB1-202ENST00000535458 ZCCHC6Q5VYS8 1495 aaKnown RBP15.35■□□□□ 0.05
KPNB1-202ENST00000535458 SUPT5HO00267 1087 aaKnown RBP15.27■□□□□ 0.03
KPNB1-202ENST00000535458 DCAF8L2P0C7V8 631 aa15.06■□□□□ 0
KPNB1-202ENST00000535458 ABCC9O60706 1549 aa14.95□□□□□ -0.02
KPNB1-202ENST00000535458 CHIC1Q5VXU3 224 aa14.87□□□□□ -0.03
KPNB1-202ENST00000535458 DCAF1Q9Y4B6 1507 aa14.87□□□□□ -0.03
KPNB1-202ENST00000535458 MYO15BQ96JP2 1530 aa14.81□□□□□ -0.04
KPNB1-202ENST00000535458 PCGF6Q9BYE7 350 aa14.55□□□□□ -0.08
KPNB1-202ENST00000535458 HRCP23327 699 aa14.51□□□□□ -0.09
KPNB1-202ENST00000535458 PPARGC1BQ86YN6 1023 aaKnown RBP14.49□□□□□ -0.09
KPNB1-202ENST00000535458 NACADO15069 1562 aa14.49□□□□□ -0.09
KPNB1-202ENST00000535458 RB1CC1Q8TDY2 1594 aa14.46□□□□□ -0.1
KPNB1-202ENST00000535458 LOC105371045A0A1W2PR82 267 aa14.44□□□□□ -0.1
KPNB1-202ENST00000535458 SCRIBQ14160 1630 aa14.44□□□□□ -0.1
KPNB1-202ENST00000535458 RSF1Q96T23 1441 aaPredicted RBP14.39□□□□□ -0.11
KPNB1-202ENST00000535458 UNC13AQ9UPW8 1703 aa14.29□□□□□ -0.12
KPNB1-202ENST00000535458 TRIM41Q8WV44 630 aa14.22□□□□□ -0.13
KPNB1-202ENST00000535458 TRIM26Q12899 539 aaPredicted RBP14.19□□□□□ -0.14
KPNB1-202ENST00000535458 CECR2Q9BXF3 1484 aa14.16□□□□□ -0.14
KPNB1-202ENST00000535458 BICRAQ9NZM4 1560 aa14.11□□□□□ -0.15
KPNB1-202ENST00000535458 FAM9AQ8IZU1 332 aaPredicted RBP14.11□□□□□ -0.15
KPNB1-202ENST00000535458 MROH2BQ7Z745 1585 aa14.11□□□□□ -0.15
KPNB1-202ENST00000535458 WIZO95785 1651 aa14.04□□□□□ -0.16
KPNB1-202ENST00000535458 EHMT2Q96KQ7 1210 aa14.01□□□□□ -0.17
KPNB1-202ENST00000535458 PABPN1Q86U42 306 aaKnown RBP eCLIP13.98□□□□□ -0.176e-6■■□□□ 12.8
KPNB1-202ENST00000535458 BAZ1AQ9NRL2 1556 aaPredicted RBP13.94□□□□□ -0.18
KPNB1-202ENST00000535458 ZEB1P37275 1124 aaPredicted RBP13.9□□□□□ -0.18
KPNB1-202ENST00000535458 EIF4G1Q04637 1599 aaKnown RBP13.86□□□□□ -0.19
KPNB1-202ENST00000535458 TOP2AP11388 1531 aaKnown RBP13.81□□□□□ -0.2
KPNB1-202ENST00000535458 SMARCA4P51532 1647 aa13.8□□□□□ -0.2
KPNB1-202ENST00000535458 CCDC88BA6NC98 1476 aa13.77□□□□□ -0.21
KPNB1-202ENST00000535458 ABCC8Q09428 1581 aa13.75□□□□□ -0.21
KPNB1-202ENST00000535458 SCAF1Q9H7N4 1312 aaKnown RBP13.75□□□□□ -0.21
KPNB1-202ENST00000535458 SMARCA2P51531 1590 aa13.74□□□□□ -0.21
KPNB1-202ENST00000535458 PELP1Q8IZL8 1130 aaKnown RBP13.73□□□□□ -0.21
KPNB1-202ENST00000535458 SOGA1O94964 1423 aa13.64□□□□□ -0.23
KPNB1-202ENST00000535458 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.61□□□□□ -0.23
KPNB1-202ENST00000535458 TTBK1Q5TCY1 1321 aaPredicted RBP13.61□□□□□ -0.23
KPNB1-202ENST00000535458 CEP162Q5TB80 1403 aa13.6□□□□□ -0.23
KPNB1-202ENST00000535458 WRNQ14191 1432 aaPredicted RBP eCLIP13.6□□□□□ -0.23
KPNB1-202ENST00000535458 CCER1Q8TC90 406 aaPredicted RBP13.58□□□□□ -0.24
KPNB1-202ENST00000535458 CSRNP3Q8WYN3 585 aa13.58□□□□□ -0.24
KPNB1-202ENST00000535458 TNIKQ9UKE5 1360 aa13.58□□□□□ -0.24
KPNB1-202ENST00000535458 CC2D2AQ9P2K1 1620 aa13.57□□□□□ -0.24
KPNB1-202ENST00000535458 EEA1Q15075 1411 aa13.57□□□□□ -0.24
KPNB1-202ENST00000535458 RUSC2Q8N2Y8 1516 aa13.57□□□□□ -0.24
KPNB1-202ENST00000535458 DNAJC5BQ9UF47 199 aa13.56□□□□□ -0.24
KPNB1-202ENST00000535458 UBTFP17480 764 aaKnown RBP13.54□□□□□ -0.24
KPNB1-202ENST00000535458 PEG3Q9GZU2 1588 aa13.52□□□□□ -0.25
KPNB1-202ENST00000535458 GOLGA3Q08378 1498 aa13.49□□□□□ -0.25
KPNB1-202ENST00000535458 NEUROD1Q13562 356 aa13.46□□□□□ -0.25
KPNB1-202ENST00000535458 GTF3C3Q9Y5Q9 886 aa13.44□□□□□ -0.26
KPNB1-202ENST00000535458 ATAD2BQ9ULI0 1458 aa13.44□□□□□ -0.26
KPNB1-202ENST00000535458 SYNJ1O43426 1573 aa13.44□□□□□ -0.26
KPNB1-202ENST00000535458 YTHDC1Q96MU7 727 aaKnown RBP13.41□□□□□ -0.26
KPNB1-202ENST00000535458 BAZ1BQ9UIG0 1483 aaKnown RBP13.41□□□□□ -0.26
KPNB1-202ENST00000535458 ACIN1Q9UKV3 1341 aaKnown RBP13.4□□□□□ -0.26
KPNB1-202ENST00000535458 CEP164Q9UPV0 1460 aa13.4□□□□□ -0.26
KPNB1-202ENST00000535458 KIF21BO75037 1637 aa13.38□□□□□ -0.27
KPNB1-202ENST00000535458 NCAPD3P42695 1498 aa13.37□□□□□ -0.27
KPNB1-202ENST00000535458 HMGXB3Q12766 1538 aa13.35□□□□□ -0.27
KPNB1-202ENST00000535458 CENPBP07199 599 aaPredicted RBP13.35□□□□□ -0.27
KPNB1-202ENST00000535458 DIEXFQ68CQ4 756 aaKnown RBP13.34□□□□□ -0.27
KPNB1-202ENST00000535458 CLIP1P30622 1438 aa13.34□□□□□ -0.27
KPNB1-202ENST00000535458 RAPGEF2Q9Y4G8 1499 aa13.3□□□□□ -0.28
KPNB1-202ENST00000535458 VPS8Q8N3P4 1428 aa13.28□□□□□ -0.28
KPNB1-202ENST00000535458 HNRNPUL2Q1KMD3 747 aaKnown RBP13.28□□□□□ -0.28
KPNB1-202ENST00000535458 TOP2BQ02880 1626 aa13.26□□□□□ -0.29
KPNB1-202ENST00000535458 RANGAP1P46060 587 aaPredicted RBP13.26□□□□□ -0.29
KPNB1-202ENST00000535458 APLP2Q06481 763 aa13.25□□□□□ -0.29
KPNB1-202ENST00000535458 ZNF316A6NFI3 1004 aaPredicted RBP13.24□□□□□ -0.29
KPNB1-202ENST00000535458 BIVM-ERCC5R4GMW8 1640 aa13.21□□□□□ -0.3
KPNB1-202ENST00000535458 PRXQ9BXM0 1461 aa13.16□□□□□ -0.3
KPNB1-202ENST00000535458 ERICH3Q5RHP9 1530 aa13.15□□□□□ -0.3
KPNB1-202ENST00000535458 CUX1P39880 1505 aa13.13□□□□□ -0.31
KPNB1-202ENST00000535458 ARAP1Q96P48 1450 aa13.11□□□□□ -0.31
KPNB1-202ENST00000535458 KIF27Q86VH2 1401 aa13.09□□□□□ -0.31
KPNB1-202ENST00000535458 MYT1Q01538 1121 aa13.09□□□□□ -0.31
KPNB1-202ENST00000535458 CFTRP13569 1480 aa13.07□□□□□ -0.32
KPNB1-202ENST00000535458 KANK4Q5T7N3 995 aaPredicted RBP13.07□□□□□ -0.32
KPNB1-202ENST00000535458 MIER1Q8N108 512 aa13.05□□□□□ -0.32
KPNB1-202ENST00000535458 NESP48681 1621 aa13.04□□□□□ -0.32
KPNB1-202ENST00000535458 DHX57Q6P158 1386 aaKnown RBP13.01□□□□□ -0.33
KPNB1-202ENST00000535458 CLSPNQ9HAW4 1339 aa13.01□□□□□ -0.33
KPNB1-202ENST00000535458 LAMC3Q9Y6N6 1575 aa13□□□□□ -0.33
KPNB1-202ENST00000535458 ARHGAP35Q9NRY4 1499 aa12.99□□□□□ -0.33
KPNB1-202ENST00000535458 RRBP1Q9P2E9 1410 aaKnown RBP12.98□□□□□ -0.33
KPNB1-202ENST00000535458 PRDM2Q13029 1718 aa12.98□□□□□ -0.33
KPNB1-202ENST00000535458 CADPSQ9ULU8 1353 aa12.97□□□□□ -0.33
KPNB1-202ENST00000535458 CUX2O14529 1486 aa12.95□□□□□ -0.34
KPNB1-202ENST00000535458 IGF1RP08069 1367 aa12.95□□□□□ -0.34
KPNB1-202ENST00000535458 AEBP2Q6ZN18 517 aaPredicted RBP12.95□□□□□ -0.34
KPNB1-202ENST00000535458 KIF21AQ7Z4S6 1674 aa12.94□□□□□ -0.34
KPNB1-202ENST00000535458 CCNB3Q8WWL7 1395 aa12.94□□□□□ -0.34
KPNB1-202ENST00000535458 ITGAEP38570 1179 aa12.9□□□□□ -0.34
KPNB1-202ENST00000535458 CARMIL1Q5VZK9 1371 aa12.9□□□□□ -0.35
KPNB1-202ENST00000535458 FGD5Q6ZNL6 1462 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms