RNA–Protein interactions for RNA: ENST00000510290.5

SRPK1-211, Transcript of SRSF protein kinase 1, humanhuman

TSL 3

Gene SRPK1, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-211ENST00000510290 AEBP2Q6ZN18 517 aaPredicted RBP24.03■■□□□ 1.44
SRPK1-211ENST00000510290 CHIC1Q5VXU3 224 aa23.92■■□□□ 1.42
SRPK1-211ENST00000510290 PHF23Q9BUL5 403 aaPredicted RBP21.07■□□□□ 0.96
SRPK1-211ENST00000510290 SENP3Q9H4L4 574 aaPredicted RBP20.37■□□□□ 0.85
SRPK1-211ENST00000510290 PLPPR3Q6T4P5 718 aa19.66■□□□□ 0.74
SRPK1-211ENST00000510290 FOXD1Q16676 465 aa18.82■□□□□ 0.6
SRPK1-211ENST00000510290 ADRA2BP18089 450 aa18.49■□□□□ 0.55
SRPK1-211ENST00000510290 PPP6R1Q9UPN7 881 aa18.46■□□□□ 0.55
SRPK1-211ENST00000510290 PIAS4Q8N2W9 510 aaPredicted RBP17.89■□□□□ 0.45
SRPK1-211ENST00000510290 KCNA4P22459 653 aa17.46■□□□□ 0.39
SRPK1-211ENST00000510290 PPP4R3CPQ6ZMV5 832 aa17.37■□□□□ 0.37
SRPK1-211ENST00000510290 MSH5O43196 834 aa17.21■□□□□ 0.35
SRPK1-211ENST00000510290 NCBP3Q53F19 620 aaKnown RBP17.08■□□□□ 0.32
SRPK1-211ENST00000510290 SCAF1Q9H7N4 1312 aaKnown RBP16.96■□□□□ 0.31
SRPK1-211ENST00000510290 CNKSR2Q8WXI2 1034 aa16.79■□□□□ 0.28
SRPK1-211ENST00000510290 EHMT2Q96KQ7 1210 aa16.79■□□□□ 0.28
SRPK1-211ENST00000510290 NPM3O75607 178 aaKnown RBP16.78■□□□□ 0.28
SRPK1-211ENST00000510290 SLC4A1APQ9BWU0 796 aaKnown RBP16.74■□□□□ 0.27
SRPK1-211ENST00000510290 MAPK8IP2Q13387 824 aaPredicted RBP16.65■□□□□ 0.26
SRPK1-211ENST00000510290 CSRNP3Q8WYN3 585 aa16.35■□□□□ 0.21
SRPK1-211ENST00000510290 RNF216Q9NWF9 866 aaPredicted RBP16.34■□□□□ 0.21
SRPK1-211ENST00000510290 DMRT2Q9Y5R5 561 aa16.3■□□□□ 0.2
SRPK1-211ENST00000510290 DNAJC5BQ9UF47 199 aa16.18■□□□□ 0.18
SRPK1-211ENST00000510290 HOXD11P31277 338 aaPredicted RBP16.14■□□□□ 0.17
SRPK1-211ENST00000510290 ZBTB22O15209 634 aa16.04■□□□□ 0.16
SRPK1-211ENST00000510290 FOXD4L1Q9NU39 408 aa15.96■□□□□ 0.15
SRPK1-211ENST00000510290 POTEDQ86YR6 584 aa15.77■□□□□ 0.12
SRPK1-211ENST00000510290 SLC4A2P04920 1241 aa15.72■□□□□ 0.11
SRPK1-211ENST00000510290 DCAF8L1A6NGE4 600 aa15.66■□□□□ 0.1
SRPK1-211ENST00000510290 MYCNP04198 464 aaPredicted RBP15.51■□□□□ 0.07
SRPK1-211ENST00000510290 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.45■□□□□ 0.063e-9■■□□□ 13.3
SRPK1-211ENST00000510290 ATXN8OSP0DMR3 200 aa15.35■□□□□ 0.05
SRPK1-211ENST00000510290 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.21■□□□□ 0.03
SRPK1-211ENST00000510290 HNRNPUL2Q1KMD3 747 aaKnown RBP15.21■□□□□ 0.03
SRPK1-211ENST00000510290 U3KPZ7 1027 aaPredicted RBP15.19■□□□□ 0.02
SRPK1-211ENST00000510290 SAMD1Q6SPF0 538 aaPredicted RBP15.16■□□□□ 0.02
SRPK1-211ENST00000510290 ATF5Q9Y2D1 282 aaPredicted RBP15.03■□□□□ -0
SRPK1-211ENST00000510290 APLP2Q06481 763 aa14.95□□□□□ -0.02
SRPK1-211ENST00000510290 FKBP8Q14318 412 aa14.79□□□□□ -0.04
SRPK1-211ENST00000510290 ZNF219Q9P2Y4 722 aaPredicted RBP14.79□□□□□ -0.04
SRPK1-211ENST00000510290 RNF39Q9H2S5 420 aa14.76□□□□□ -0.05
SRPK1-211ENST00000510290 TRHP20396 242 aaPredicted RBP14.65□□□□□ -0.06
SRPK1-211ENST00000510290 C1QBPQ07021 282 aaKnown RBP14.64□□□□□ -0.07
SRPK1-211ENST00000510290 SPINK5Q9NQ38 1064 aaPredicted RBP14.64□□□□□ -0.07
SRPK1-211ENST00000510290 CAPN15O75808 1086 aa14.61□□□□□ -0.07
SRPK1-211ENST00000510290 POLA2Q14181 598 aa14.49□□□□□ -0.09
SRPK1-211ENST00000510290 FBLN2P98095 1184 aa14.45□□□□□ -0.1
SRPK1-211ENST00000510290 MKRN4PQ13434 485 aaPredicted RBP14.4□□□□□ -0.1
SRPK1-211ENST00000510290 SPDYE4A6NLX3 237 aa14.35□□□□□ -0.11
SRPK1-211ENST00000510290 ABCB7O75027 752 aa14.35□□□□□ -0.11
SRPK1-211ENST00000510290 ZBTB12Q9Y330 459 aaPredicted RBP14.29□□□□□ -0.12
SRPK1-211ENST00000510290 AMER1Q5JTC6 1135 aaPredicted RBP14.26□□□□□ -0.13
SRPK1-211ENST00000510290 RTN4Q9NQC3 1192 aaKnown RBP14.22□□□□□ -0.13
SRPK1-211ENST00000510290 DSG3P32926 999 aa14.21□□□□□ -0.13
SRPK1-211ENST00000510290 FBXO3Q9UK99 471 aa14.16□□□□□ -0.14
SRPK1-211ENST00000510290 CACNB1Q02641 598 aaPredicted RBP14.11□□□□□ -0.15
SRPK1-211ENST00000510290 PROM2Q8N271 834 aa14.1□□□□□ -0.15
SRPK1-211ENST00000510290 ZNF692Q9BU19 519 aaPredicted RBP13.98□□□□□ -0.17
SRPK1-211ENST00000510290 OSCARQ8IYS5 282 aa13.96□□□□□ -0.17
SRPK1-211ENST00000510290 SPDYE2BA6NHP3 402 aa13.94□□□□□ -0.18
SRPK1-211ENST00000510290 SPDYE6P0CI01 402 aa13.94□□□□□ -0.18
SRPK1-211ENST00000510290 SPDYE2Q495Y8 402 aa13.94□□□□□ -0.18
SRPK1-211ENST00000510290 VASPP50552 380 aaPredicted RBP13.92□□□□□ -0.18
SRPK1-211ENST00000510290 SSUH2Q9Y2M2 353 aa13.84□□□□□ -0.19
SRPK1-211ENST00000510290 PABPN1Q86U42 306 aaKnown RBP eCLIP13.79□□□□□ -0.2
SRPK1-211ENST00000510290 IFNLR1Q8IU57 520 aaPredicted RBP13.75□□□□□ -0.21
SRPK1-211ENST00000510290 STAG3Q9UJ98 1225 aa13.75□□□□□ -0.21
SRPK1-211ENST00000510290 KLHL34Q8N239 644 aa13.65□□□□□ -0.22
SRPK1-211ENST00000510290 PLCD3Q8N3E9 789 aa13.63□□□□□ -0.23
SRPK1-211ENST00000510290 SLC24A1O60721 1099 aa13.6□□□□□ -0.23
SRPK1-211ENST00000510290 MIER1Q8N108 512 aa13.59□□□□□ -0.23
SRPK1-211ENST00000510290 RBM42Q9BTD8 480 aaKnown RBP13.57□□□□□ -0.24
SRPK1-211ENST00000510290 SPOCK2Q92563 424 aa13.56□□□□□ -0.24
SRPK1-211ENST00000510290 PLEKHG5O94827 1062 aa13.51□□□□□ -0.25
SRPK1-211ENST00000510290 AKT1S1Q96B36 256 aa13.48□□□□□ -0.25
SRPK1-211ENST00000510290 PKD2Q13563 968 aa13.46□□□□□ -0.25
SRPK1-211ENST00000510290 ZBTB47Q9UFB7 747 aaPredicted RBP13.44□□□□□ -0.26
SRPK1-211ENST00000510290 DCAF8L2P0C7V8 631 aa13.43□□□□□ -0.26
SRPK1-211ENST00000510290 SPDYE1Q8NFV5 336 aaPredicted RBP13.43□□□□□ -0.26
SRPK1-211ENST00000510290 CLEC11AQ9Y240 323 aa13.38□□□□□ -0.27
SRPK1-211ENST00000510290 REM2Q8IYK8 340 aaPredicted RBP13.35□□□□□ -0.27
SRPK1-211ENST00000510290 ECM2O94769 699 aaPredicted RBP13.34□□□□□ -0.27
SRPK1-211ENST00000510290 PRR29P0C7W0 189 aa13.32□□□□□ -0.28
SRPK1-211ENST00000510290 CIZ1Q9ULV3 898 aaPredicted RBP13.29□□□□□ -0.28
SRPK1-211ENST00000510290 CREBZFQ9NS37 354 aa13.19□□□□□ -0.3
SRPK1-211ENST00000510290 PLCB2Q00722 1185 aa13.18□□□□□ -0.3
SRPK1-211ENST00000510290 PITPNM1O00562 1244 aa13.17□□□□□ -0.3
SRPK1-211ENST00000510290 RGL2O15211 777 aa13.17□□□□□ -0.3
SRPK1-211ENST00000510290 GSE1Q14687 1217 aa13.16□□□□□ -0.3
SRPK1-211ENST00000510290 TRIM41Q8WV44 630 aa13.15□□□□□ -0.3
SRPK1-211ENST00000510290 NUBP1P53384 320 aa13.13□□□□□ -0.31
SRPK1-211ENST00000510290 DCAF8Q5TAQ9 597 aa13.12□□□□□ -0.31
SRPK1-211ENST00000510290 MNX1P50219 401 aaPredicted RBP13.08□□□□□ -0.32
SRPK1-211ENST00000510290 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.07□□□□□ -0.32
SRPK1-211ENST00000510290 BBXQ8WY36 941 aaPredicted RBP13.06□□□□□ -0.32
SRPK1-211ENST00000510290 FAM212AQ96EL1 285 aa13.06□□□□□ -0.32
SRPK1-211ENST00000510290 NPM1P06748 294 aaKnown RBP eCLIP13.04□□□□□ -0.32
SRPK1-211ENST00000510290 HAP1P54257 671 aaPredicted RBP13.03□□□□□ -0.32
SRPK1-211ENST00000510290 CHGAP10645 457 aaKnown RBP13□□□□□ -0.33
SRPK1-211ENST00000510290 RASEFQ8IZ41 740 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms