RNA–Protein interactions for RNA: ENST00000252136.11

TRMT2A-201, Transcript of tRNA methyltransferase 2 homolog A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRMT2A, Length 2,964 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT2A-201ENST00000252136 NISCHQ9Y2I1 1504 aa37.51■■■■□ 3.6
TRMT2A-201ENST00000252136 SHROOM4Q9ULL8 1493 aa33.33■■■□□ 2.93
TRMT2A-201ENST00000252136 SUPT5HO00267 1087 aaKnown RBP33.12■■■□□ 2.89
TRMT2A-201ENST00000252136 HRCP23327 699 aa32.77■■■□□ 2.84
TRMT2A-201ENST00000252136 PCGF6Q9BYE7 350 aa32.45■■■□□ 2.78
TRMT2A-201ENST00000252136 MYO15BQ96JP2 1530 aa32.35■■■□□ 2.77
TRMT2A-201ENST00000252136 CHIC1Q5VXU3 224 aa32.29■■■□□ 2.76
TRMT2A-201ENST00000252136 PPARGC1BQ86YN6 1023 aaKnown RBP32.28■■■□□ 2.76
TRMT2A-201ENST00000252136 ZCCHC6Q5VYS8 1495 aaKnown RBP31.82■■■□□ 2.68
TRMT2A-201ENST00000252136 DCAF8L2P0C7V8 631 aa31.77■■■□□ 2.68
TRMT2A-201ENST00000252136 LOC105371045A0A1W2PR82 267 aa31.65■■■□□ 2.66
TRMT2A-201ENST00000252136 DCAF1Q9Y4B6 1507 aa31.47■■■□□ 2.63
TRMT2A-201ENST00000252136 TRIM26Q12899 539 aaPredicted RBP31.34■■■□□ 2.61
TRMT2A-201ENST00000252136 CCDC180Q9P1Z9 1646 aa31.15■■■□□ 2.58
TRMT2A-201ENST00000252136 PELP1Q8IZL8 1130 aaKnown RBP31.02■■■□□ 2.56
TRMT2A-201ENST00000252136 ZEB1P37275 1124 aaPredicted RBP30.92■■■□□ 2.54
TRMT2A-201ENST00000252136 SCAF1Q9H7N4 1312 aaKnown RBP30.86■■■□□ 2.53
TRMT2A-201ENST00000252136 FAM9AQ8IZU1 332 aaPredicted RBP30.69■■■□□ 2.5
TRMT2A-201ENST00000252136 EHMT2Q96KQ7 1210 aa30.67■■■□□ 2.5
TRMT2A-201ENST00000252136 TRIM41Q8WV44 630 aa30.58■■■□□ 2.49
TRMT2A-201ENST00000252136 ACIN1Q9UKV3 1341 aaKnown RBP30.2■■■□□ 2.42
TRMT2A-201ENST00000252136 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.19■■■□□ 2.42
TRMT2A-201ENST00000252136 NEUROD1Q13562 356 aa30.18■■■□□ 2.42
TRMT2A-201ENST00000252136 ABCC9O60706 1549 aa30.17■■■□□ 2.42
TRMT2A-201ENST00000252136 RSF1Q96T23 1441 aaPredicted RBP30.16■■■□□ 2.42
TRMT2A-201ENST00000252136 CCER1Q8TC90 406 aaPredicted RBP30.12■■■□□ 2.41
TRMT2A-201ENST00000252136 GTF3C3Q9Y5Q9 886 aa30.02■■■□□ 2.4
TRMT2A-201ENST00000252136 RB1CC1Q8TDY2 1594 aa29.99■■■□□ 2.39
TRMT2A-201ENST00000252136 DIEXFQ68CQ4 756 aaKnown RBP29.94■■■□□ 2.38
TRMT2A-201ENST00000252136 CENPBP07199 599 aaPredicted RBP29.91■■■□□ 2.38
TRMT2A-201ENST00000252136 SCRIBQ14160 1630 aa29.89■■■□□ 2.37
TRMT2A-201ENST00000252136 TTBK1Q5TCY1 1321 aaPredicted RBP29.85■■■□□ 2.37
TRMT2A-201ENST00000252136 MYT1Q01538 1121 aa29.65■■■□□ 2.34
TRMT2A-201ENST00000252136 YTHDC1Q96MU7 727 aaKnown RBP29.58■■■□□ 2.33
TRMT2A-201ENST00000252136 CECR2Q9BXF3 1484 aa29.46■■■□□ 2.31
TRMT2A-201ENST00000252136 ZNF316A6NFI3 1004 aaPredicted RBP29.38■■■□□ 2.29
TRMT2A-201ENST00000252136 MROH2BQ7Z745 1585 aa29.35■■■□□ 2.29
TRMT2A-201ENST00000252136 WIZO95785 1651 aa29.24■■■□□ 2.27
TRMT2A-201ENST00000252136 MIER1Q8N108 512 aa29.21■■■□□ 2.27
TRMT2A-201ENST00000252136 CEP162Q5TB80 1403 aa29.17■■■□□ 2.26
TRMT2A-201ENST00000252136 WRNQ14191 1432 aaPredicted RBP eCLIP29.13■■■□□ 2.252e-9■■■■■ 83.6
TRMT2A-201ENST00000252136 UBTFP17480 764 aaKnown RBP29.12■■■□□ 2.25
TRMT2A-201ENST00000252136 HNRNPUL2Q1KMD3 747 aaKnown RBP29.06■■■□□ 2.24
TRMT2A-201ENST00000252136 CCDC88BA6NC98 1476 aa29.05■■■□□ 2.24
TRMT2A-201ENST00000252136 ABCC8Q09428 1581 aa29.04■■■□□ 2.24
TRMT2A-201ENST00000252136 SOGA1O94964 1423 aa28.97■■■□□ 2.23
TRMT2A-201ENST00000252136 TNIKQ9UKE5 1360 aa28.94■■■□□ 2.22
TRMT2A-201ENST00000252136 EIF4G1Q04637 1599 aaKnown RBP28.9■■■□□ 2.22
TRMT2A-201ENST00000252136 BAZ1AQ9NRL2 1556 aaPredicted RBP28.9■■■□□ 2.22
TRMT2A-201ENST00000252136 CSRNP3Q8WYN3 585 aa28.9■■■□□ 2.22
TRMT2A-201ENST00000252136 RUSC2Q8N2Y8 1516 aa28.8■■■□□ 2.2
TRMT2A-201ENST00000252136 NACADO15069 1562 aa28.76■■■□□ 2.19
TRMT2A-201ENST00000252136 RANGAP1P46060 587 aaPredicted RBP28.65■■■□□ 2.18
TRMT2A-201ENST00000252136 GOLGA3Q08378 1498 aa28.63■■■□□ 2.17
TRMT2A-201ENST00000252136 APLP2Q06481 763 aa28.61■■■□□ 2.17
TRMT2A-201ENST00000252136 EEA1Q15075 1411 aa28.61■■■□□ 2.17
TRMT2A-201ENST00000252136 TOP2AP11388 1531 aaKnown RBP28.59■■■□□ 2.17
TRMT2A-201ENST00000252136 SUPT16HQ9Y5B9 1047 aaKnown RBP28.59■■■□□ 2.17
TRMT2A-201ENST00000252136 SMARCA2P51531 1590 aa28.53■■■□□ 2.16
TRMT2A-201ENST00000252136 CLIP1P30622 1438 aa28.47■■■□□ 2.15
TRMT2A-201ENST00000252136 CLSPNQ9HAW4 1339 aa28.36■■■□□ 2.13
TRMT2A-201ENST00000252136 TSHZ2Q9NRE2 1034 aa28.36■■■□□ 2.13
TRMT2A-201ENST00000252136 SMARCA4P51532 1647 aa28.36■■■□□ 2.13
TRMT2A-201ENST00000252136 CEP164Q9UPV0 1460 aa28.34■■■□□ 2.13
TRMT2A-201ENST00000252136 VPS8Q8N3P4 1428 aa28.34■■■□□ 2.13
TRMT2A-201ENST00000252136 ANP32EQ9BTT0 268 aa28.25■■■□□ 2.11
TRMT2A-201ENST00000252136 DHX57Q6P158 1386 aaKnown RBP28.24■■■□□ 2.11
TRMT2A-201ENST00000252136 BCANQ96GW7 911 aa28.23■■■□□ 2.11
TRMT2A-201ENST00000252136 KCNH8Q96L42 1107 aa28.17■■■□□ 2.1
TRMT2A-201ENST00000252136 RAPGEF2Q9Y4G8 1499 aa28.16■■■□□ 2.1
TRMT2A-201ENST00000252136 KIF21BO75037 1637 aa28.14■■■□□ 2.1
TRMT2A-201ENST00000252136 SYNJ1O43426 1573 aa28.1■■■□□ 2.09
TRMT2A-201ENST00000252136 ITGAEP38570 1179 aa28.08■■■□□ 2.09
TRMT2A-201ENST00000252136 KANK4Q5T7N3 995 aaPredicted RBP28.06■■■□□ 2.08
TRMT2A-201ENST00000252136 FKBP8Q14318 412 aa28.01■■■□□ 2.07
TRMT2A-201ENST00000252136 PABPN1Q86U42 306 aaKnown RBP eCLIP28.01■■■□□ 2.077e-7■■■■□ 25.6
TRMT2A-201ENST00000252136 BAZ1BQ9UIG0 1483 aaKnown RBP28■■■□□ 2.07
TRMT2A-201ENST00000252136 BCL11AQ9H165 835 aa27.98■■■□□ 2.07
TRMT2A-201ENST00000252136 DDX10Q13206 875 aaKnown RBP27.87■■■□□ 2.05
TRMT2A-201ENST00000252136 NEFLP07196 543 aa27.79■■■□□ 2.04
TRMT2A-201ENST00000252136 UNC13AQ9UPW8 1703 aa27.79■■■□□ 2.04
TRMT2A-201ENST00000252136 ARAP1Q96P48 1450 aa27.78■■■□□ 2.04
TRMT2A-201ENST00000252136 RBM19Q9Y4C8 960 aaKnown RBP27.76■■■□□ 2.03
TRMT2A-201ENST00000252136 CCNB3Q8WWL7 1395 aa27.75■■■□□ 2.03
TRMT2A-201ENST00000252136 TRIM52Q96A61 297 aa27.74■■■□□ 2.03
TRMT2A-201ENST00000252136 RRBP1Q9P2E9 1410 aaKnown RBP27.73■■■□□ 2.03
TRMT2A-201ENST00000252136 HIRIP3Q9BW71 556 aaPredicted RBP27.72■■■□□ 2.03
TRMT2A-201ENST00000252136 RAB3GAP2Q9H2M9 1393 aa27.68■■■□□ 2.02
TRMT2A-201ENST00000252136 SIN3AQ96ST3 1273 aa27.67■■■□□ 2.02
TRMT2A-201ENST00000252136 CUX2O14529 1486 aa27.59■■■□□ 2.01
TRMT2A-201ENST00000252136 PRXQ9BXM0 1461 aa27.58■■■□□ 2.01
TRMT2A-201ENST00000252136 MAPKBP1O60336 1514 aa27.54■■■□□ 2
TRMT2A-201ENST00000252136 TOP2BQ02880 1626 aa27.54■■■□□ 2
TRMT2A-201ENST00000252136 PEG3Q9GZU2 1588 aa27.54■■■□□ 2
TRMT2A-201ENST00000252136 ERICH3Q5RHP9 1530 aa27.53■■■□□ 2
TRMT2A-201ENST00000252136 ANP32CO43423 234 aa27.53■■■□□ 2
TRMT2A-201ENST00000252136 WDR97A6NE52 1622 aa27.52■■■□□ 2
TRMT2A-201ENST00000252136 ATAD2BQ9ULI0 1458 aa27.52■■■□□ 2
TRMT2A-201ENST00000252136 PPP1R15AO75807 674 aaPredicted RBP27.51■■■□□ 2
TRMT2A-201ENST00000252136 FAM50AQ14320 339 aaKnown RBP27.51■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms