RNA–Protein interactions for RNA: ENST00000361690.7

SRPK1-202, Transcript of SRSF protein kinase 1, humanhuman

TSL 1 (best)

Gene SRPK1, Length 4,286 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-202ENST00000361690 NISCHQ9Y2I1 1504 aa22.24■■□□□ 1.15
SRPK1-202ENST00000361690 CCDC180Q9P1Z9 1646 aa19.26■□□□□ 0.67
SRPK1-202ENST00000361690 DCAF8L2P0C7V8 631 aa18.67■□□□□ 0.58
SRPK1-202ENST00000361690 ZCCHC6Q5VYS8 1495 aaKnown RBP18.67■□□□□ 0.58
SRPK1-202ENST00000361690 SHROOM4Q9ULL8 1493 aa18.41■□□□□ 0.54
SRPK1-202ENST00000361690 ABCC9O60706 1549 aa18.34■□□□□ 0.53
SRPK1-202ENST00000361690 DCAF1Q9Y4B6 1507 aa18.32■□□□□ 0.52
SRPK1-202ENST00000361690 MYO15BQ96JP2 1530 aa18.06■□□□□ 0.48
SRPK1-202ENST00000361690 NACADO15069 1562 aa18■□□□□ 0.47
SRPK1-202ENST00000361690 SCRIBQ14160 1630 aa17.85■□□□□ 0.45
SRPK1-202ENST00000361690 RB1CC1Q8TDY2 1594 aa17.85■□□□□ 0.45
SRPK1-202ENST00000361690 SUPT5HO00267 1087 aaKnown RBP17.82■□□□□ 0.44
SRPK1-202ENST00000361690 PABPN1Q86U42 306 aaKnown RBP eCLIP17.38■□□□□ 0.371e-9■□□□□ 9.3
SRPK1-202ENST00000361690 UNC13AQ9UPW8 1703 aa17.34■□□□□ 0.37
SRPK1-202ENST00000361690 RSF1Q96T23 1441 aaPredicted RBP17.32■□□□□ 0.36
SRPK1-202ENST00000361690 CECR2Q9BXF3 1484 aa17.31■□□□□ 0.36
SRPK1-202ENST00000361690 BICRAQ9NZM4 1560 aa17.22■□□□□ 0.35
SRPK1-202ENST00000361690 MROH2BQ7Z745 1585 aa17.2■□□□□ 0.34
SRPK1-202ENST00000361690 BAZ1AQ9NRL2 1556 aaPredicted RBP17.19■□□□□ 0.34
SRPK1-202ENST00000361690 SMARCA4P51532 1647 aa17.05■□□□□ 0.32
SRPK1-202ENST00000361690 WIZO95785 1651 aa17.04■□□□□ 0.32
SRPK1-202ENST00000361690 CHIC1Q5VXU3 224 aa16.99■□□□□ 0.31
SRPK1-202ENST00000361690 TOP2AP11388 1531 aaKnown RBP16.87■□□□□ 0.29
SRPK1-202ENST00000361690 ATAD2BQ9ULI0 1458 aa16.8■□□□□ 0.28
SRPK1-202ENST00000361690 SMARCA2P51531 1590 aa16.8■□□□□ 0.28
SRPK1-202ENST00000361690 PEG3Q9GZU2 1588 aa16.78■□□□□ 0.28
SRPK1-202ENST00000361690 BAZ1BQ9UIG0 1483 aaKnown RBP16.76■□□□□ 0.27
SRPK1-202ENST00000361690 EIF4G1Q04637 1599 aaKnown RBP16.76■□□□□ 0.27
SRPK1-202ENST00000361690 CCDC88BA6NC98 1476 aa16.74■□□□□ 0.27
SRPK1-202ENST00000361690 TRIM41Q8WV44 630 aa16.72■□□□□ 0.27
SRPK1-202ENST00000361690 NCAPD3P42695 1498 aa16.63■□□□□ 0.25
SRPK1-202ENST00000361690 HMGXB3Q12766 1538 aa16.57■□□□□ 0.24
SRPK1-202ENST00000361690 CC2D2AQ9P2K1 1620 aa16.5■□□□□ 0.23
SRPK1-202ENST00000361690 FAM9AQ8IZU1 332 aaPredicted RBP16.48■□□□□ 0.23
SRPK1-202ENST00000361690 ABCC8Q09428 1581 aa16.42■□□□□ 0.22
SRPK1-202ENST00000361690 LOC105371045A0A1W2PR82 267 aa16.39■□□□□ 0.21
SRPK1-202ENST00000361690 WRNQ14191 1432 aaPredicted RBP eCLIP16.36■□□□□ 0.21
SRPK1-202ENST00000361690 EHMT2Q96KQ7 1210 aa16.29■□□□□ 0.2
SRPK1-202ENST00000361690 CFTRP13569 1480 aa16.28■□□□□ 0.2
SRPK1-202ENST00000361690 CADPSQ9ULU8 1353 aa16.27■□□□□ 0.2
SRPK1-202ENST00000361690 SYNJ1O43426 1573 aa16.19■□□□□ 0.18
SRPK1-202ENST00000361690 SOGA1O94964 1423 aa16.16■□□□□ 0.18
SRPK1-202ENST00000361690 EEA1Q15075 1411 aa16.16■□□□□ 0.18
SRPK1-202ENST00000361690 CSRNP3Q8WYN3 585 aa16.14■□□□□ 0.17
SRPK1-202ENST00000361690 DNAJC5BQ9UF47 199 aa16.11■□□□□ 0.17
SRPK1-202ENST00000361690 TOP2BQ02880 1626 aa16.1■□□□□ 0.17
SRPK1-202ENST00000361690 FANCD2Q9BXW9 1451 aa16.08■□□□□ 0.17
SRPK1-202ENST00000361690 NESP48681 1621 aa16.07■□□□□ 0.16
SRPK1-202ENST00000361690 PRDM2Q13029 1718 aa16.07■□□□□ 0.16
SRPK1-202ENST00000361690 RUSC2Q8N2Y8 1516 aa16.07■□□□□ 0.16
SRPK1-202ENST00000361690 CUX1P39880 1505 aa16.07■□□□□ 0.16
SRPK1-202ENST00000361690 UBTFP17480 764 aaKnown RBP16.05■□□□□ 0.16
SRPK1-202ENST00000361690 BIVM-ERCC5R4GMW8 1640 aa16.04■□□□□ 0.16
SRPK1-202ENST00000361690 LAMC3Q9Y6N6 1575 aa16.03■□□□□ 0.16
SRPK1-202ENST00000361690 PDS5BQ9NTI5 1447 aa16.01■□□□□ 0.15
SRPK1-202ENST00000361690 CEP164Q9UPV0 1460 aa15.98■□□□□ 0.15
SRPK1-202ENST00000361690 KIF27Q86VH2 1401 aa15.96■□□□□ 0.15
SRPK1-202ENST00000361690 GOLGA3Q08378 1498 aa15.95■□□□□ 0.14
SRPK1-202ENST00000361690 FGD5Q6ZNL6 1462 aa15.93■□□□□ 0.14
SRPK1-202ENST00000361690 TNIKQ9UKE5 1360 aa15.91■□□□□ 0.14
SRPK1-202ENST00000361690 DNMBPQ6XZF7 1577 aa15.9■□□□□ 0.14
SRPK1-202ENST00000361690 CUX2O14529 1486 aa15.9■□□□□ 0.14
SRPK1-202ENST00000361690 TOPBP1Q92547 1522 aa15.89■□□□□ 0.13
SRPK1-202ENST00000361690 KIF21BO75037 1637 aa15.85■□□□□ 0.13
SRPK1-202ENST00000361690 CEP162Q5TB80 1403 aa15.85■□□□□ 0.13
SRPK1-202ENST00000361690 URB2Q14146 1524 aaKnown RBP15.82■□□□□ 0.12
SRPK1-202ENST00000361690 POLA1P09884 1462 aaPredicted RBP15.82■□□□□ 0.12
SRPK1-202ENST00000361690 RAPGEF2Q9Y4G8 1499 aa15.82■□□□□ 0.12
SRPK1-202ENST00000361690 RANGAP1P46060 587 aaPredicted RBP15.81■□□□□ 0.12
SRPK1-202ENST00000361690 RAD54L2Q9Y4B4 1467 aa15.81■□□□□ 0.12
SRPK1-202ENST00000361690 PCGF6Q9BYE7 350 aa15.79■□□□□ 0.12
SRPK1-202ENST00000361690 KIF21AQ7Z4S6 1674 aa15.79■□□□□ 0.12
SRPK1-202ENST00000361690 PRXQ9BXM0 1461 aa15.78■□□□□ 0.12
SRPK1-202ENST00000361690 ERCC6Q03468 1493 aa15.77■□□□□ 0.12
SRPK1-202ENST00000361690 IGF1RP08069 1367 aa15.76■□□□□ 0.11
SRPK1-202ENST00000361690 MRC2Q9UBG0 1479 aa15.75■□□□□ 0.11
SRPK1-202ENST00000361690 ERICH3Q5RHP9 1530 aa15.75■□□□□ 0.11
SRPK1-202ENST00000361690 ABCA10Q8WWZ4 1543 aa15.75■□□□□ 0.11
SRPK1-202ENST00000361690 CARMIL1Q5VZK9 1371 aa15.74■□□□□ 0.11
SRPK1-202ENST00000361690 CLIP1P30622 1438 aa15.74■□□□□ 0.11
SRPK1-202ENST00000361690 TRIM26Q12899 539 aaPredicted RBP15.72■□□□□ 0.11
SRPK1-202ENST00000361690 TDRD9Q8NDG6 1382 aaKnown RBP15.7■□□□□ 0.1
SRPK1-202ENST00000361690 PPARGC1BQ86YN6 1023 aaKnown RBP15.69■□□□□ 0.1
SRPK1-202ENST00000361690 APLP2Q06481 763 aa15.65■□□□□ 0.1
SRPK1-202ENST00000361690 GAPVD1Q14C86 1478 aa15.64■□□□□ 0.09
SRPK1-202ENST00000361690 TTBK1Q5TCY1 1321 aaPredicted RBP15.61■□□□□ 0.09
SRPK1-202ENST00000361690 WDR62O43379 1518 aa15.59■□□□□ 0.09
SRPK1-202ENST00000361690 IFT140Q96RY7 1462 aa15.58■□□□□ 0.08
SRPK1-202ENST00000361690 VPS8Q8N3P4 1428 aa15.57■□□□□ 0.08
SRPK1-202ENST00000361690 WDR97A6NE52 1622 aa15.57■□□□□ 0.08
SRPK1-202ENST00000361690 CUL7Q14999 1698 aa15.56■□□□□ 0.08
SRPK1-202ENST00000361690 TARBP1Q13395 1621 aaKnown RBP15.56■□□□□ 0.08
SRPK1-202ENST00000361690 ABCA5Q8WWZ7 1642 aa15.55■□□□□ 0.08
SRPK1-202ENST00000361690 AQRO60306 1485 aaKnown RBP eCLIP15.55■□□□□ 0.089e-8■■■■□ 21
SRPK1-202ENST00000361690 GRIN2BQ13224 1484 aa15.5■□□□□ 0.07
SRPK1-202ENST00000361690 THOC2Q8NI27 1593 aaKnown RBP15.49■□□□□ 0.07
SRPK1-202ENST00000361690 ZNF608Q9ULD9 1512 aaPredicted RBP15.48■□□□□ 0.07
SRPK1-202ENST00000361690 P3H3Q8IVL6 736 aa15.47■□□□□ 0.07
SRPK1-202ENST00000361690 FHAD1B1AJZ9 1412 aa15.47■□□□□ 0.07
SRPK1-202ENST00000361690 ARAP1Q96P48 1450 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms