RNA–Protein interactions for RNA: ENST00000476448.1

MCM3-204, Transcript of minichromosome maintenance complex component 3, humanhuman

TSL 2

Gene MCM3, Length 982 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCM3-204ENST00000476448 NISCHQ9Y2I1 1504 aa35.87■■■■□ 3.33
MCM3-204ENST00000476448 ABCC9O60706 1549 aa33.12■■■□□ 2.89
MCM3-204ENST00000476448 CCDC180Q9P1Z9 1646 aa32.29■■■□□ 2.76
MCM3-204ENST00000476448 DNAJC5BQ9UF47 199 aa31.83■■■□□ 2.69
MCM3-204ENST00000476448 RB1CC1Q8TDY2 1594 aa31.1■■■□□ 2.57
MCM3-204ENST00000476448 PABPN1Q86U42 306 aaKnown RBP eCLIP30.84■■■□□ 2.53
MCM3-204ENST00000476448 NACADO15069 1562 aa30.75■■■□□ 2.51
MCM3-204ENST00000476448 DCAF8L2P0C7V8 631 aa30.64■■■□□ 2.5
MCM3-204ENST00000476448 UNC13AQ9UPW8 1703 aa30.38■■■□□ 2.45
MCM3-204ENST00000476448 BICRAQ9NZM4 1560 aa30.36■■■□□ 2.45
MCM3-204ENST00000476448 MYO15BQ96JP2 1530 aa30.12■■■□□ 2.41
MCM3-204ENST00000476448 CECR2Q9BXF3 1484 aa29.87■■■□□ 2.37
MCM3-204ENST00000476448 CC2D2AQ9P2K1 1620 aa29.82■■■□□ 2.36
MCM3-204ENST00000476448 SHROOM4Q9ULL8 1493 aa29.7■■■□□ 2.35
MCM3-204ENST00000476448 EIF4G1Q04637 1599 aaKnown RBP29.6■■■□□ 2.33
MCM3-204ENST00000476448 ZCCHC6Q5VYS8 1495 aaKnown RBP29.58■■■□□ 2.33
MCM3-204ENST00000476448 DNAJC5Q9H3Z4 198 aa29.57■■■□□ 2.32
MCM3-204ENST00000476448 DCAF1Q9Y4B6 1507 aa29.52■■■□□ 2.32
MCM3-204ENST00000476448 SCRIBQ14160 1630 aa29.52■■■□□ 2.32
MCM3-204ENST00000476448 CUX2O14529 1486 aa28.71■■■□□ 2.19
MCM3-204ENST00000476448 ERCC6Q03468 1493 aa28.55■■■□□ 2.16
MCM3-204ENST00000476448 NCAPD3P42695 1498 aa28.5■■■□□ 2.15
MCM3-204ENST00000476448 ATAD2BQ9ULI0 1458 aa28.34■■■□□ 2.13
MCM3-204ENST00000476448 NESP48681 1621 aa28.32■■■□□ 2.12
MCM3-204ENST00000476448 HMGXB3Q12766 1538 aa28.13■■■□□ 2.09
MCM3-204ENST00000476448 SMARCA2P51531 1590 aa28.1■■■□□ 2.09
MCM3-204ENST00000476448 SMARCA4P51532 1647 aa28.07■■■□□ 2.08
MCM3-204ENST00000476448 THOC2Q8NI27 1593 aaKnown RBP28.03■■■□□ 2.08
MCM3-204ENST00000476448 TRIM41Q8WV44 630 aa27.99■■■□□ 2.07
MCM3-204ENST00000476448 BAZ1BQ9UIG0 1483 aaKnown RBP27.95■■■□□ 2.07
MCM3-204ENST00000476448 LAMC3Q9Y6N6 1575 aa27.85■■■□□ 2.05
MCM3-204ENST00000476448 BAZ1AQ9NRL2 1556 aaPredicted RBP27.81■■■□□ 2.04
MCM3-204ENST00000476448 PEG3Q9GZU2 1588 aa27.79■■■□□ 2.04
MCM3-204ENST00000476448 KIF21AQ7Z4S6 1674 aa27.77■■■□□ 2.04
MCM3-204ENST00000476448 PDS5BQ9NTI5 1447 aa27.76■■■□□ 2.04
MCM3-204ENST00000476448 MROH2BQ7Z745 1585 aa27.69■■■□□ 2.02
MCM3-204ENST00000476448 CADPSQ9ULU8 1353 aa27.61■■■□□ 2.01
MCM3-204ENST00000476448 MRC2Q9UBG0 1479 aa27.57■■■□□ 2
MCM3-204ENST00000476448 WDR62O43379 1518 aa27.51■■■□□ 2
MCM3-204ENST00000476448 OSCARQ8IYS5 282 aa27.39■■□□□ 1.98
MCM3-204ENST00000476448 CEP164Q9UPV0 1460 aa27.31■■□□□ 1.96
MCM3-204ENST00000476448 FANCD2Q9BXW9 1451 aa27.27■■□□□ 1.96
MCM3-204ENST00000476448 WIZO95785 1651 aa27.27■■□□□ 1.96
MCM3-204ENST00000476448 CFTRP13569 1480 aa27.15■■□□□ 1.94
MCM3-204ENST00000476448 URB2Q14146 1524 aaKnown RBP27.13■■□□□ 1.93
MCM3-204ENST00000476448 RIMBP3CA6NJZ7 1639 aa27.04■■□□□ 1.92
MCM3-204ENST00000476448 RIMBP3BA6NNM3 1639 aa27.04■■□□□ 1.92
MCM3-204ENST00000476448 RIMBP3Q9UFD9 1639 aa27.04■■□□□ 1.92
MCM3-204ENST00000476448 ZNF608Q9ULD9 1512 aaPredicted RBP26.93■■□□□ 1.9
MCM3-204ENST00000476448 ARHGEF11O15085 1522 aa26.9■■□□□ 1.9
MCM3-204ENST00000476448 RSF1Q96T23 1441 aaPredicted RBP26.9■■□□□ 1.9
MCM3-204ENST00000476448 CYB5RLQ6IPT4 315 aa26.84■■□□□ 1.89
MCM3-204ENST00000476448 TOP2AP11388 1531 aaKnown RBP26.83■■□□□ 1.89
MCM3-204ENST00000476448 IFT140Q96RY7 1462 aa26.81■■□□□ 1.88
MCM3-204ENST00000476448 TRHP20396 242 aaPredicted RBP26.7■■□□□ 1.86
MCM3-204ENST00000476448 TOPBP1Q92547 1522 aa26.69■■□□□ 1.86
MCM3-204ENST00000476448 CCDC88BA6NC98 1476 aa26.64■■□□□ 1.86
MCM3-204ENST00000476448 ARAP1Q96P48 1450 aa26.64■■□□□ 1.86
MCM3-204ENST00000476448 EIF4G3O43432 1585 aaKnown RBP26.62■■□□□ 1.85
MCM3-204ENST00000476448 AQRO60306 1485 aaKnown RBP eCLIP26.61■■□□□ 1.859e-8■■■■■ 53
MCM3-204ENST00000476448 PRDM2Q13029 1718 aa26.58■■□□□ 1.85
MCM3-204ENST00000476448 FBLN2P98095 1184 aa26.53■■□□□ 1.84
MCM3-204ENST00000476448 CHD1O14646 1710 aa26.5■■□□□ 1.83
MCM3-204ENST00000476448 ABCC8Q09428 1581 aa26.49■■□□□ 1.83
MCM3-204ENST00000476448 TARBP1Q13395 1621 aaKnown RBP26.47■■□□□ 1.83
MCM3-204ENST00000476448 DNMBPQ6XZF7 1577 aa26.47■■□□□ 1.83
MCM3-204ENST00000476448 POLA1P09884 1462 aaPredicted RBP26.38■■□□□ 1.81
MCM3-204ENST00000476448 RAD54L2Q9Y4B4 1467 aa26.37■■□□□ 1.81
MCM3-204ENST00000476448 TDRD9Q8NDG6 1382 aaKnown RBP26.35■■□□□ 1.81
MCM3-204ENST00000476448 AEBP2Q6ZN18 517 aaPredicted RBP26.32■■□□□ 1.8
MCM3-204ENST00000476448 SOGA1O94964 1423 aa26.27■■□□□ 1.8
MCM3-204ENST00000476448 CLASP1Q7Z460 1538 aa26.27■■□□□ 1.8
MCM3-204ENST00000476448 SNAPC4Q5SXM2 1469 aa26.25■■□□□ 1.79
MCM3-204ENST00000476448 CHMP7Q8WUX9 453 aaPredicted RBP26.22■■□□□ 1.79
MCM3-204ENST00000476448 FGD5Q6ZNL6 1462 aa26.12■■□□□ 1.77
MCM3-204ENST00000476448 SYNJ1O43426 1573 aa26.11■■□□□ 1.77
MCM3-204ENST00000476448 MAGI1Q96QZ7 1491 aaPredicted RBP26.1■■□□□ 1.77
MCM3-204ENST00000476448 GRIN2BQ13224 1484 aa26.06■■□□□ 1.76
MCM3-204ENST00000476448 GAPVD1Q14C86 1478 aa26.05■■□□□ 1.76
MCM3-204ENST00000476448 SYNJ2O15056 1496 aa26.04■■□□□ 1.76
MCM3-204ENST00000476448 WDR97A6NE52 1622 aa26.03■■□□□ 1.76
MCM3-204ENST00000476448 CUX1P39880 1505 aa26.02■■□□□ 1.76
MCM3-204ENST00000476448 ERCC6L2Q5T890 1561 aa25.9■■□□□ 1.74
MCM3-204ENST00000476448 PBRM1Q86U86 1689 aa25.81■■□□□ 1.72
MCM3-204ENST00000476448 ABCA10Q8WWZ4 1543 aa25.78■■□□□ 1.72
MCM3-204ENST00000476448 ABCA5Q8WWZ7 1642 aa25.75■■□□□ 1.71
MCM3-204ENST00000476448 GRIN2AQ12879 1464 aa25.73■■□□□ 1.71
MCM3-204ENST00000476448 CEP170Q5SW79 1584 aa25.72■■□□□ 1.71
MCM3-204ENST00000476448 NUP160Q12769 1436 aa25.71■■□□□ 1.71
MCM3-204ENST00000476448 ADAMTS12P58397 1594 aa25.6■■□□□ 1.69
MCM3-204ENST00000476448 SHROOM2Q13796 1616 aa25.59■■□□□ 1.69
MCM3-204ENST00000476448 KIF13AQ9H1H9 1805 aa25.56■■□□□ 1.68
MCM3-204ENST00000476448 FHAD1B1AJZ9 1412 aa25.54■■□□□ 1.68
MCM3-204ENST00000476448 WRNQ14191 1432 aaPredicted RBP eCLIP25.54■■□□□ 1.68
MCM3-204ENST00000476448 PRG4Q92954 1404 aaPredicted RBP25.52■■□□□ 1.68
MCM3-204ENST00000476448 FAM69CQ0P6D2 419 aa25.51■■□□□ 1.67
MCM3-204ENST00000476448 JPH4Q96JJ6 628 aa25.5■■□□□ 1.67
MCM3-204ENST00000476448 KDM4FA0A1W2PPD8 638 aa25.48■■□□□ 1.67
MCM3-204ENST00000476448 ABCC10Q5T3U5 1492 aa25.45■■□□□ 1.66
MCM3-204ENST00000476448 ERICH3Q5RHP9 1530 aa25.39■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms