RNA–Protein interactions for RNA: ENST00000465405.1

GABRE-205, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 1 (best)

Gene GABRE, Length 706 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-205ENST00000465405 NISCHQ9Y2I1 1504 aa21.76■■□□□ 1.07
GABRE-205ENST00000465405 AEBP2Q6ZN18 517 aaPredicted RBP21■□□□□ 0.95
GABRE-205ENST00000465405 CHIC1Q5VXU3 224 aa19.67■□□□□ 0.74
GABRE-205ENST00000465405 CCDC180Q9P1Z9 1646 aa19.42■□□□□ 0.7
GABRE-205ENST00000465405 ABCC9O60706 1549 aa19.25■□□□□ 0.67
GABRE-205ENST00000465405 RB1CC1Q8TDY2 1594 aa18.38■□□□□ 0.53
GABRE-205ENST00000465405 NACADO15069 1562 aa18.3■□□□□ 0.52
GABRE-205ENST00000465405 DCAF8L2P0C7V8 631 aa18.3■□□□□ 0.52
GABRE-205ENST00000465405 SENP3Q9H4L4 574 aaPredicted RBP18.12■□□□□ 0.49
GABRE-205ENST00000465405 MYO15BQ96JP2 1530 aa18.1■□□□□ 0.49
GABRE-205ENST00000465405 ZCCHC6Q5VYS8 1495 aaKnown RBP18.08■□□□□ 0.49
GABRE-205ENST00000465405 UNC13AQ9UPW8 1703 aa18.02■□□□□ 0.48
GABRE-205ENST00000465405 PABPN1Q86U42 306 aaKnown RBP eCLIP17.97■□□□□ 0.47
GABRE-205ENST00000465405 DCAF1Q9Y4B6 1507 aa17.96■□□□□ 0.47
GABRE-205ENST00000465405 DNAJC5BQ9UF47 199 aa17.9■□□□□ 0.46
GABRE-205ENST00000465405 BICRAQ9NZM4 1560 aa17.88■□□□□ 0.45
GABRE-205ENST00000465405 SCRIBQ14160 1630 aa17.75■□□□□ 0.43
GABRE-205ENST00000465405 PHF23Q9BUL5 403 aaPredicted RBP17.71■□□□□ 0.43
GABRE-205ENST00000465405 POTEDQ86YR6 584 aa17.61■□□□□ 0.41
GABRE-205ENST00000465405 SHROOM4Q9ULL8 1493 aa17.57■□□□□ 0.4
GABRE-205ENST00000465405 EIF4G1Q04637 1599 aaKnown RBP17.4■□□□□ 0.38
GABRE-205ENST00000465405 CC2D2AQ9P2K1 1620 aa17.39■□□□□ 0.38
GABRE-205ENST00000465405 CECR2Q9BXF3 1484 aa17.3■□□□□ 0.36
GABRE-205ENST00000465405 FOXD1Q16676 465 aa16.98■□□□□ 0.31
GABRE-205ENST00000465405 SMARCA4P51532 1647 aa16.94■□□□□ 0.3
GABRE-205ENST00000465405 NCAPD3P42695 1498 aa16.9■□□□□ 0.3
GABRE-205ENST00000465405 ATAD2BQ9ULI0 1458 aa16.9■□□□□ 0.3
GABRE-205ENST00000465405 BAZ1AQ9NRL2 1556 aaPredicted RBP16.86■□□□□ 0.29
GABRE-205ENST00000465405 SMARCA2P51531 1590 aa16.83■□□□□ 0.28
GABRE-205ENST00000465405 MROH2BQ7Z745 1585 aa16.8■□□□□ 0.28
GABRE-205ENST00000465405 HMGXB3Q12766 1538 aa16.79■□□□□ 0.28
GABRE-205ENST00000465405 PEG3Q9GZU2 1588 aa16.75■□□□□ 0.27
GABRE-205ENST00000465405 BAZ1BQ9UIG0 1483 aaKnown RBP16.73■□□□□ 0.27
GABRE-205ENST00000465405 NESP48681 1621 aa16.62■□□□□ 0.25
GABRE-205ENST00000465405 WIZO95785 1651 aa16.62■□□□□ 0.25
GABRE-205ENST00000465405 ERCC6Q03468 1493 aa16.57■□□□□ 0.24
GABRE-205ENST00000465405 RSF1Q96T23 1441 aaPredicted RBP16.51■□□□□ 0.23
GABRE-205ENST00000465405 LAMC3Q9Y6N6 1575 aa16.48■□□□□ 0.23
GABRE-205ENST00000465405 CUX2O14529 1486 aa16.46■□□□□ 0.23
GABRE-205ENST00000465405 KIF21AQ7Z4S6 1674 aa16.4■□□□□ 0.22
GABRE-205ENST00000465405 CADPSQ9ULU8 1353 aa16.4■□□□□ 0.22
GABRE-205ENST00000465405 TOP2AP11388 1531 aaKnown RBP16.39■□□□□ 0.21
GABRE-205ENST00000465405 THOC2Q8NI27 1593 aaKnown RBP16.38■□□□□ 0.21
GABRE-205ENST00000465405 PDS5BQ9NTI5 1447 aa16.37■□□□□ 0.21
GABRE-205ENST00000465405 MSH5O43196 834 aa16.31■□□□□ 0.2
GABRE-205ENST00000465405 CFTRP13569 1480 aa16.26■□□□□ 0.19
GABRE-205ENST00000465405 MRC2Q9UBG0 1479 aa16.23■□□□□ 0.19
GABRE-205ENST00000465405 DNAJC5Q9H3Z4 198 aa16.23■□□□□ 0.19
GABRE-205ENST00000465405 FANCD2Q9BXW9 1451 aa16.22■□□□□ 0.19
GABRE-205ENST00000465405 CCDC88BA6NC98 1476 aa16.22■□□□□ 0.19
GABRE-205ENST00000465405 CEP164Q9UPV0 1460 aa16.22■□□□□ 0.19
GABRE-205ENST00000465405 WDR62O43379 1518 aa16.19■□□□□ 0.18
GABRE-205ENST00000465405 PRDM2Q13029 1718 aa16.12■□□□□ 0.17
GABRE-205ENST00000465405 URB2Q14146 1524 aaKnown RBP16.09■□□□□ 0.17
GABRE-205ENST00000465405 SUPT5HO00267 1087 aaKnown RBP15.97■□□□□ 0.15
GABRE-205ENST00000465405 TOPBP1Q92547 1522 aa15.94■□□□□ 0.14
GABRE-205ENST00000465405 DNMBPQ6XZF7 1577 aa15.89■□□□□ 0.13
GABRE-205ENST00000465405 ABCC8Q09428 1581 aa15.88■□□□□ 0.13
GABRE-205ENST00000465405 IFT140Q96RY7 1462 aa15.87■□□□□ 0.13
GABRE-205ENST00000465405 ZNF608Q9ULD9 1512 aaPredicted RBP15.87■□□□□ 0.13
GABRE-205ENST00000465405 POLA1P09884 1462 aaPredicted RBP15.8■□□□□ 0.12
GABRE-205ENST00000465405 TARBP1Q13395 1621 aaKnown RBP15.79■□□□□ 0.12
GABRE-205ENST00000465405 EIF4G3O43432 1585 aaKnown RBP15.78■□□□□ 0.12
GABRE-205ENST00000465405 OSCARQ8IYS5 282 aa15.76■□□□□ 0.11
GABRE-205ENST00000465405 CUX1P39880 1505 aa15.76■□□□□ 0.11
GABRE-205ENST00000465405 RAD54L2Q9Y4B4 1467 aa15.76■□□□□ 0.11
GABRE-205ENST00000465405 AQRO60306 1485 aaKnown RBP eCLIP15.75■□□□□ 0.115e-18■■■■□ 20.1
GABRE-205ENST00000465405 FGD5Q6ZNL6 1462 aa15.73■□□□□ 0.11
GABRE-205ENST00000465405 SOGA1O94964 1423 aa15.73■□□□□ 0.11
GABRE-205ENST00000465405 TDRD9Q8NDG6 1382 aaKnown RBP15.69■□□□□ 0.1
GABRE-205ENST00000465405 PIAS4Q8N2W9 510 aaPredicted RBP15.67■□□□□ 0.1
GABRE-205ENST00000465405 CHD1O14646 1710 aa15.63■□□□□ 0.09
GABRE-205ENST00000465405 TRIM41Q8WV44 630 aa15.63■□□□□ 0.09
GABRE-205ENST00000465405 WDR97A6NE52 1622 aa15.61■□□□□ 0.09
GABRE-205ENST00000465405 FBLN2P98095 1184 aa15.59■□□□□ 0.09
GABRE-205ENST00000465405 SNAPC4Q5SXM2 1469 aa15.58■□□□□ 0.08
GABRE-205ENST00000465405 WRNQ14191 1432 aaPredicted RBP eCLIP15.56■□□□□ 0.08
GABRE-205ENST00000465405 SYNJ1O43426 1573 aa15.56■□□□□ 0.08
GABRE-205ENST00000465405 RIMBP3CA6NJZ7 1639 aa15.56■□□□□ 0.08
GABRE-205ENST00000465405 RIMBP3BA6NNM3 1639 aa15.56■□□□□ 0.08
GABRE-205ENST00000465405 RIMBP3Q9UFD9 1639 aa15.56■□□□□ 0.08
GABRE-205ENST00000465405 BIVM-ERCC5R4GMW8 1640 aa15.56■□□□□ 0.08
GABRE-205ENST00000465405 TOP2BQ02880 1626 aa15.55■□□□□ 0.08
GABRE-205ENST00000465405 ABCA10Q8WWZ4 1543 aa15.55■□□□□ 0.08
GABRE-205ENST00000465405 GRIN2BQ13224 1484 aa15.55■□□□□ 0.08
GABRE-205ENST00000465405 PBRM1Q86U86 1689 aa15.54■□□□□ 0.08
GABRE-205ENST00000465405 GAPVD1Q14C86 1478 aa15.53■□□□□ 0.08
GABRE-205ENST00000465405 ABCA5Q8WWZ7 1642 aa15.52■□□□□ 0.08
GABRE-205ENST00000465405 ARHGEF11O15085 1522 aa15.52■□□□□ 0.07
GABRE-205ENST00000465405 MAGI1Q96QZ7 1491 aaPredicted RBP15.52■□□□□ 0.07
GABRE-205ENST00000465405 CHMP7Q8WUX9 453 aaPredicted RBP15.49■□□□□ 0.07
GABRE-205ENST00000465405 SYNJ2O15056 1496 aa15.47■□□□□ 0.07
GABRE-205ENST00000465405 CLASP1Q7Z460 1538 aa15.44■□□□□ 0.06
GABRE-205ENST00000465405 CYB5RLQ6IPT4 315 aa15.4■□□□□ 0.06
GABRE-205ENST00000465405 ADAMTS12P58397 1594 aa15.39■□□□□ 0.05
GABRE-205ENST00000465405 ARAP1Q96P48 1450 aa15.39■□□□□ 0.05
GABRE-205ENST00000465405 GRIN2AQ12879 1464 aa15.36■□□□□ 0.05
GABRE-205ENST00000465405 ERICH3Q5RHP9 1530 aa15.35■□□□□ 0.05
GABRE-205ENST00000465405 FHAD1B1AJZ9 1412 aa15.34■□□□□ 0.05
GABRE-205ENST00000465405 CEP170Q5SW79 1584 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms