RNA–Protein interactions for RNA: ENST00000323013.6

RRP7A-201, Transcript of ribosomal RNA processing 7 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP7A, Length 3,801 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP7A-201ENST00000323013 NISCHQ9Y2I1 1504 aa22.76■■□□□ 1.23
RRP7A-201ENST00000323013 SHROOM4Q9ULL8 1493 aa19.91■□□□□ 0.78
RRP7A-201ENST00000323013 SUPT5HO00267 1087 aaKnown RBP19.54■□□□□ 0.72
RRP7A-201ENST00000323013 DCAF8L2P0C7V8 631 aa19.49■□□□□ 0.71
RRP7A-201ENST00000323013 ZCCHC6Q5VYS8 1495 aaKnown RBP19.2■□□□□ 0.66
RRP7A-201ENST00000323013 CCDC180Q9P1Z9 1646 aa19.12■□□□□ 0.65
RRP7A-201ENST00000323013 CHIC1Q5VXU3 224 aa18.77■□□□□ 0.6
RRP7A-201ENST00000323013 MYO15BQ96JP2 1530 aa18.67■□□□□ 0.58
RRP7A-201ENST00000323013 DCAF1Q9Y4B6 1507 aa18.44■□□□□ 0.54
RRP7A-201ENST00000323013 LOC105371045A0A1W2PR82 267 aa18.41■□□□□ 0.54
RRP7A-201ENST00000323013 PCGF6Q9BYE7 350 aa18.38■□□□□ 0.53
RRP7A-201ENST00000323013 SCRIBQ14160 1630 aa18.29■□□□□ 0.52
RRP7A-201ENST00000323013 ABCC9O60706 1549 aa18.2■□□□□ 0.5
RRP7A-201ENST00000323013 HRCP23327 699 aa18.18■□□□□ 0.5
RRP7A-201ENST00000323013 EHMT2Q96KQ7 1210 aa18.17■□□□□ 0.5
RRP7A-201ENST00000323013 FAM9AQ8IZU1 332 aaPredicted RBP18.14■□□□□ 0.49
RRP7A-201ENST00000323013 RSF1Q96T23 1441 aaPredicted RBP18.11■□□□□ 0.49
RRP7A-201ENST00000323013 PPARGC1BQ86YN6 1023 aaKnown RBP18.06■□□□□ 0.48
RRP7A-201ENST00000323013 TRIM41Q8WV44 630 aa18.06■□□□□ 0.48
RRP7A-201ENST00000323013 RB1CC1Q8TDY2 1594 aa17.93■□□□□ 0.46
RRP7A-201ENST00000323013 CECR2Q9BXF3 1484 aa17.93■□□□□ 0.46
RRP7A-201ENST00000323013 TRIM26Q12899 539 aaPredicted RBP17.82■□□□□ 0.44
RRP7A-201ENST00000323013 MROH2BQ7Z745 1585 aa17.8■□□□□ 0.44
RRP7A-201ENST00000323013 NACADO15069 1562 aa17.79■□□□□ 0.44
RRP7A-201ENST00000323013 WIZO95785 1651 aa17.7■□□□□ 0.42
RRP7A-201ENST00000323013 PELP1Q8IZL8 1130 aaKnown RBP17.59■□□□□ 0.41
RRP7A-201ENST00000323013 PABPN1Q86U42 306 aaKnown RBP eCLIP17.56■□□□□ 0.4
RRP7A-201ENST00000323013 TTBK1Q5TCY1 1321 aaPredicted RBP17.54■□□□□ 0.4
RRP7A-201ENST00000323013 BAZ1AQ9NRL2 1556 aaPredicted RBP17.45■□□□□ 0.38
RRP7A-201ENST00000323013 ABCC8Q09428 1581 aa17.4■□□□□ 0.38
RRP7A-201ENST00000323013 CCDC88BA6NC98 1476 aa17.35■□□□□ 0.37
RRP7A-201ENST00000323013 ZEB1P37275 1124 aaPredicted RBP17.33■□□□□ 0.37
RRP7A-201ENST00000323013 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.33■□□□□ 0.36
RRP7A-201ENST00000323013 SMARCA4P51532 1647 aa17.31■□□□□ 0.36
RRP7A-201ENST00000323013 TOP2AP11388 1531 aaKnown RBP17.29■□□□□ 0.36
RRP7A-201ENST00000323013 UBTFP17480 764 aaKnown RBP17.28■□□□□ 0.36
RRP7A-201ENST00000323013 SOGA1O94964 1423 aa17.27■□□□□ 0.35
RRP7A-201ENST00000323013 UNC13AQ9UPW8 1703 aa17.26■□□□□ 0.35
RRP7A-201ENST00000323013 SMARCA2P51531 1590 aa17.24■□□□□ 0.35
RRP7A-201ENST00000323013 EIF4G1Q04637 1599 aaKnown RBP17.24■□□□□ 0.35
RRP7A-201ENST00000323013 CCER1Q8TC90 406 aaPredicted RBP17.23■□□□□ 0.35
RRP7A-201ENST00000323013 RUSC2Q8N2Y8 1516 aa17.19■□□□□ 0.34
RRP7A-201ENST00000323013 RANGAP1P46060 587 aaPredicted RBP17.18■□□□□ 0.34
RRP7A-201ENST00000323013 CSRNP3Q8WYN3 585 aa17.17■□□□□ 0.34
RRP7A-201ENST00000323013 CEP162Q5TB80 1403 aa17.13■□□□□ 0.33
RRP7A-201ENST00000323013 MYT1Q01538 1121 aa17.12■□□□□ 0.33
RRP7A-201ENST00000323013 BICRAQ9NZM4 1560 aa17.09■□□□□ 0.33
RRP7A-201ENST00000323013 WRNQ14191 1432 aaPredicted RBP eCLIP17.04■□□□□ 0.32
RRP7A-201ENST00000323013 TNIKQ9UKE5 1360 aa17.02■□□□□ 0.31
RRP7A-201ENST00000323013 HNRNPUL2Q1KMD3 747 aaKnown RBP16.96■□□□□ 0.31
RRP7A-201ENST00000323013 BAZ1BQ9UIG0 1483 aaKnown RBP16.94■□□□□ 0.3
RRP7A-201ENST00000323013 ATAD2BQ9ULI0 1458 aa16.94■□□□□ 0.3
RRP7A-201ENST00000323013 GOLGA3Q08378 1498 aa16.93■□□□□ 0.3
RRP7A-201ENST00000323013 EEA1Q15075 1411 aa16.92■□□□□ 0.3
RRP7A-201ENST00000323013 SYNJ1O43426 1573 aa16.91■□□□□ 0.3
RRP7A-201ENST00000323013 APLP2Q06481 763 aa16.85■□□□□ 0.29
RRP7A-201ENST00000323013 SCAF1Q9H7N4 1312 aaKnown RBP16.84■□□□□ 0.29
RRP7A-201ENST00000323013 DIEXFQ68CQ4 756 aaKnown RBP16.83■□□□□ 0.28
RRP7A-201ENST00000323013 CLIP1P30622 1438 aa16.83■□□□□ 0.28
RRP7A-201ENST00000323013 PEG3Q9GZU2 1588 aa16.82■□□□□ 0.28
RRP7A-201ENST00000323013 CEP164Q9UPV0 1460 aa16.81■□□□□ 0.28
RRP7A-201ENST00000323013 RAPGEF2Q9Y4G8 1499 aa16.8■□□□□ 0.28
RRP7A-201ENST00000323013 NEUROD1Q13562 356 aa16.69■□□□□ 0.26
RRP7A-201ENST00000323013 VPS8Q8N3P4 1428 aa16.67■□□□□ 0.26
RRP7A-201ENST00000323013 KIF21BO75037 1637 aa16.66■□□□□ 0.26
RRP7A-201ENST00000323013 YTHDC1Q96MU7 727 aaKnown RBP16.66■□□□□ 0.26
RRP7A-201ENST00000323013 ZNF316A6NFI3 1004 aaPredicted RBP16.64■□□□□ 0.25
RRP7A-201ENST00000323013 ACIN1Q9UKV3 1341 aaKnown RBP16.62■□□□□ 0.25
RRP7A-201ENST00000323013 TOP2BQ02880 1626 aa16.59■□□□□ 0.25
RRP7A-201ENST00000323013 ITGAEP38570 1179 aa16.59■□□□□ 0.25
RRP7A-201ENST00000323013 KANK4Q5T7N3 995 aaPredicted RBP16.59■□□□□ 0.25
RRP7A-201ENST00000323013 GTF3C3Q9Y5Q9 886 aa16.54■□□□□ 0.24
RRP7A-201ENST00000323013 CENPBP07199 599 aaPredicted RBP16.54■□□□□ 0.24
RRP7A-201ENST00000323013 CUX1P39880 1505 aa16.53■□□□□ 0.24
RRP7A-201ENST00000323013 NCAPD3P42695 1498 aa16.53■□□□□ 0.24
RRP7A-201ENST00000323013 MIER1Q8N108 512 aa16.5■□□□□ 0.23
RRP7A-201ENST00000323013 KIF27Q86VH2 1401 aa16.5■□□□□ 0.23
RRP7A-201ENST00000323013 PRXQ9BXM0 1461 aa16.49■□□□□ 0.23
RRP7A-201ENST00000323013 ATP1B4Q9UN42 357 aaPredicted RBP16.48■□□□□ 0.23
RRP7A-201ENST00000323013 ARAP1Q96P48 1450 aa16.47■□□□□ 0.23
RRP7A-201ENST00000323013 BIVM-ERCC5R4GMW8 1640 aa16.46■□□□□ 0.23
RRP7A-201ENST00000323013 P3H3Q8IVL6 736 aa16.46■□□□□ 0.23
RRP7A-201ENST00000323013 HMGXB3Q12766 1538 aa16.44■□□□□ 0.22
RRP7A-201ENST00000323013 CFTRP13569 1480 aa16.43■□□□□ 0.22
RRP7A-201ENST00000323013 CUX2O14529 1486 aa16.42■□□□□ 0.22
RRP7A-201ENST00000323013 ERICH3Q5RHP9 1530 aa16.39■□□□□ 0.21
RRP7A-201ENST00000323013 ARHGAP35Q9NRY4 1499 aa16.35■□□□□ 0.21
RRP7A-201ENST00000323013 DHX57Q6P158 1386 aaKnown RBP16.35■□□□□ 0.21
RRP7A-201ENST00000323013 IGF1RP08069 1367 aa16.34■□□□□ 0.21
RRP7A-201ENST00000323013 CADPSQ9ULU8 1353 aa16.33■□□□□ 0.2
RRP7A-201ENST00000323013 CARMIL1Q5VZK9 1371 aa16.31■□□□□ 0.2
RRP7A-201ENST00000323013 FAM50AQ14320 339 aaKnown RBP16.31■□□□□ 0.2
RRP7A-201ENST00000323013 CCNB3Q8WWL7 1395 aa16.29■□□□□ 0.2
RRP7A-201ENST00000323013 FGD5Q6ZNL6 1462 aa16.29■□□□□ 0.2
RRP7A-201ENST00000323013 RRBP1Q9P2E9 1410 aaKnown RBP16.22■□□□□ 0.19
RRP7A-201ENST00000323013 RAD54L2Q9Y4B4 1467 aa16.22■□□□□ 0.19
RRP7A-201ENST00000323013 CC2D2AQ9P2K1 1620 aa16.2■□□□□ 0.18
RRP7A-201ENST00000323013 NESP48681 1621 aa16.19■□□□□ 0.18
RRP7A-201ENST00000323013 FANCD2Q9BXW9 1451 aa16.19■□□□□ 0.18
RRP7A-201ENST00000323013 RAB3GAP2Q9H2M9 1393 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms