RNA–Protein interactions for RNA: ENST00000589831.1

TMEM259-207, Transcript of transmembrane protein 259, humanhuman

TSL 2

Gene TMEM259, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM259-207ENST00000589831 NISCHQ9Y2I1 1504 aa46.94■■■■■ 5.1
TMEM259-207ENST00000589831 CCDC180Q9P1Z9 1646 aa41.81■■■■■ 4.28
TMEM259-207ENST00000589831 ABCC9O60706 1549 aa41.29■■■■■ 4.2
TMEM259-207ENST00000589831 RB1CC1Q8TDY2 1594 aa39.59■■■■□ 3.93
TMEM259-207ENST00000589831 DCAF8L2P0C7V8 631 aa39.56■■■■□ 3.92
TMEM259-207ENST00000589831 NACADO15069 1562 aa39.45■■■■□ 3.91
TMEM259-207ENST00000589831 MYO15BQ96JP2 1530 aa39.09■■■■□ 3.85
TMEM259-207ENST00000589831 ZCCHC6Q5VYS8 1495 aaKnown RBP38.99■■■■□ 3.83
TMEM259-207ENST00000589831 DCAF1Q9Y4B6 1507 aa38.8■■■■□ 3.8
TMEM259-207ENST00000589831 PABPN1Q86U42 306 aaKnown RBP eCLIP38.6■■■■□ 3.77
TMEM259-207ENST00000589831 UNC13AQ9UPW8 1703 aa38.54■■■■□ 3.76
TMEM259-207ENST00000589831 BICRAQ9NZM4 1560 aa38.29■■■■□ 3.72
TMEM259-207ENST00000589831 SCRIBQ14160 1630 aa38.16■■■■□ 3.7
TMEM259-207ENST00000589831 DNAJC5BQ9UF47 199 aa38.16■■■■□ 3.7
TMEM259-207ENST00000589831 SHROOM4Q9ULL8 1493 aa37.95■■■■□ 3.67
TMEM259-207ENST00000589831 EIF4G1Q04637 1599 aaKnown RBP37.37■■■■□ 3.57
TMEM259-207ENST00000589831 CC2D2AQ9P2K1 1620 aa37.28■■■■□ 3.56
TMEM259-207ENST00000589831 CECR2Q9BXF3 1484 aa37.15■■■■□ 3.54
TMEM259-207ENST00000589831 SMARCA4P51532 1647 aa36.45■■■■□ 3.43
TMEM259-207ENST00000589831 BAZ1AQ9NRL2 1556 aaPredicted RBP36.42■■■■□ 3.42
TMEM259-207ENST00000589831 NCAPD3P42695 1498 aa36.42■■■■□ 3.42
TMEM259-207ENST00000589831 ATAD2BQ9ULI0 1458 aa36.37■■■■□ 3.41
TMEM259-207ENST00000589831 SMARCA2P51531 1590 aa36.34■■■■□ 3.41
TMEM259-207ENST00000589831 HMGXB3Q12766 1538 aa36.17■■■■□ 3.38
TMEM259-207ENST00000589831 MROH2BQ7Z745 1585 aa36.15■■■■□ 3.38
TMEM259-207ENST00000589831 BAZ1BQ9UIG0 1483 aaKnown RBP36.1■■■■□ 3.37
TMEM259-207ENST00000589831 PEG3Q9GZU2 1588 aa36.08■■■■□ 3.37
TMEM259-207ENST00000589831 WIZO95785 1651 aa35.72■■■■□ 3.31
TMEM259-207ENST00000589831 ERCC6Q03468 1493 aa35.69■■■■□ 3.3
TMEM259-207ENST00000589831 RSF1Q96T23 1441 aaPredicted RBP35.66■■■■□ 3.3
TMEM259-207ENST00000589831 NESP48681 1621 aa35.61■■■■□ 3.29
TMEM259-207ENST00000589831 LAMC3Q9Y6N6 1575 aa35.49■■■■□ 3.27
TMEM259-207ENST00000589831 CADPSQ9ULU8 1353 aa35.38■■■■□ 3.25
TMEM259-207ENST00000589831 CUX2O14529 1486 aa35.36■■■■□ 3.25
TMEM259-207ENST00000589831 PDS5BQ9NTI5 1447 aa35.35■■■■□ 3.25
TMEM259-207ENST00000589831 TOP2AP11388 1531 aaKnown RBP35.35■■■■□ 3.25
TMEM259-207ENST00000589831 KIF21AQ7Z4S6 1674 aa35.13■■■■□ 3.21
TMEM259-207ENST00000589831 THOC2Q8NI27 1593 aaKnown RBP35.07■■■■□ 3.2
TMEM259-207ENST00000589831 CFTRP13569 1480 aa35.05■■■■□ 3.2
TMEM259-207ENST00000589831 CCDC88BA6NC98 1476 aa34.97■■■■□ 3.19
TMEM259-207ENST00000589831 FANCD2Q9BXW9 1451 aa34.95■■■■□ 3.19
TMEM259-207ENST00000589831 MRC2Q9UBG0 1479 aa34.95■■■■□ 3.19
TMEM259-207ENST00000589831 CEP164Q9UPV0 1460 aa34.95■■■■□ 3.19
TMEM259-207ENST00000589831 WDR62O43379 1518 aa34.78■■■■□ 3.16
TMEM259-207ENST00000589831 DNAJC5Q9H3Z4 198 aa34.7■■■■□ 3.15
TMEM259-207ENST00000589831 PRDM2Q13029 1718 aa34.67■■■■□ 3.14
TMEM259-207ENST00000589831 SUPT5HO00267 1087 aaKnown RBP34.66■■■■□ 3.14
TMEM259-207ENST00000589831 URB2Q14146 1524 aaKnown RBP34.56■■■■□ 3.12
TMEM259-207ENST00000589831 ABCC8Q09428 1581 aa34.38■■■■□ 3.09
TMEM259-207ENST00000589831 TOPBP1Q92547 1522 aa34.33■■■■□ 3.09
TMEM259-207ENST00000589831 DNMBPQ6XZF7 1577 aa34.25■■■■□ 3.07
TMEM259-207ENST00000589831 IFT140Q96RY7 1462 aa34.23■■■■□ 3.07
TMEM259-207ENST00000589831 ZNF608Q9ULD9 1512 aaPredicted RBP34.04■■■■□ 3.04
TMEM259-207ENST00000589831 POLA1P09884 1462 aaPredicted RBP34.01■■■■□ 3.04
TMEM259-207ENST00000589831 OSCARQ8IYS5 282 aa33.96■■■■□ 3.03
TMEM259-207ENST00000589831 SOGA1O94964 1423 aa33.94■■■■□ 3.02
TMEM259-207ENST00000589831 CUX1P39880 1505 aa33.93■■■■□ 3.02
TMEM259-207ENST00000589831 TARBP1Q13395 1621 aaKnown RBP33.93■■■■□ 3.02
TMEM259-207ENST00000589831 FGD5Q6ZNL6 1462 aa33.89■■■■□ 3.02
TMEM259-207ENST00000589831 RAD54L2Q9Y4B4 1467 aa33.88■■■■□ 3.01
TMEM259-207ENST00000589831 AQRO60306 1485 aaKnown RBP eCLIP33.87■■■■□ 3.012e-13■■■■□ 25.8
TMEM259-207ENST00000589831 EIF4G3O43432 1585 aaKnown RBP33.86■■■■□ 3.01
TMEM259-207ENST00000589831 TDRD9Q8NDG6 1382 aaKnown RBP33.78■■■■□ 3
TMEM259-207ENST00000589831 WDR97A6NE52 1622 aa33.68■■■□□ 2.98
TMEM259-207ENST00000589831 WRNQ14191 1432 aaPredicted RBP eCLIP33.67■■■□□ 2.98
TMEM259-207ENST00000589831 FBLN2P98095 1184 aa33.65■■■□□ 2.98
TMEM259-207ENST00000589831 GRIN2BQ13224 1484 aa33.56■■■□□ 2.96
TMEM259-207ENST00000589831 TOP2BQ02880 1626 aa33.56■■■□□ 2.96
TMEM259-207ENST00000589831 ABCA10Q8WWZ4 1543 aa33.55■■■□□ 2.96
TMEM259-207ENST00000589831 BIVM-ERCC5R4GMW8 1640 aa33.53■■■□□ 2.96
TMEM259-207ENST00000589831 GAPVD1Q14C86 1478 aa33.52■■■□□ 2.96
TMEM259-207ENST00000589831 SNAPC4Q5SXM2 1469 aa33.52■■■□□ 2.96
TMEM259-207ENST00000589831 SYNJ1O43426 1573 aa33.51■■■□□ 2.95
TMEM259-207ENST00000589831 CHMP7Q8WUX9 453 aaPredicted RBP33.5■■■□□ 2.95
TMEM259-207ENST00000589831 CHD1O14646 1710 aa33.5■■■□□ 2.95
TMEM259-207ENST00000589831 MAGI1Q96QZ7 1491 aaPredicted RBP33.49■■■□□ 2.95
TMEM259-207ENST00000589831 TRIM41Q8WV44 630 aa33.48■■■□□ 2.95
TMEM259-207ENST00000589831 ABCA5Q8WWZ7 1642 aa33.38■■■□□ 2.93
TMEM259-207ENST00000589831 SYNJ2O15056 1496 aa33.37■■■□□ 2.93
TMEM259-207ENST00000589831 PBRM1Q86U86 1689 aa33.36■■■□□ 2.93
TMEM259-207ENST00000589831 RIMBP3CA6NJZ7 1639 aa33.28■■■□□ 2.92
TMEM259-207ENST00000589831 RIMBP3BA6NNM3 1639 aa33.28■■■□□ 2.92
TMEM259-207ENST00000589831 RIMBP3Q9UFD9 1639 aa33.28■■■□□ 2.92
TMEM259-207ENST00000589831 ARHGEF11O15085 1522 aa33.27■■■□□ 2.92
TMEM259-207ENST00000589831 ERICH3Q5RHP9 1530 aa33.15■■■□□ 2.9
TMEM259-207ENST00000589831 FHAD1B1AJZ9 1412 aa33.13■■■□□ 2.89
TMEM259-207ENST00000589831 CLASP1Q7Z460 1538 aa33.12■■■□□ 2.89
TMEM259-207ENST00000589831 CYB5RLQ6IPT4 315 aa33.11■■■□□ 2.89
TMEM259-207ENST00000589831 ADAMTS12P58397 1594 aa33.1■■■□□ 2.89
TMEM259-207ENST00000589831 GRIN2AQ12879 1464 aa33.1■■■□□ 2.89
TMEM259-207ENST00000589831 KIF27Q86VH2 1401 aa33.02■■■□□ 2.88
TMEM259-207ENST00000589831 ARAP1Q96P48 1450 aa32.97■■■□□ 2.87
TMEM259-207ENST00000589831 NUP160Q12769 1436 aa32.94■■■□□ 2.86
TMEM259-207ENST00000589831 IGF1RP08069 1367 aa32.9■■■□□ 2.86
TMEM259-207ENST00000589831 CEP170Q5SW79 1584 aa32.89■■■□□ 2.86
TMEM259-207ENST00000589831 CUL7Q14999 1698 aa32.77■■■□□ 2.84
TMEM259-207ENST00000589831 CARMIL1Q5VZK9 1371 aa32.73■■■□□ 2.83
TMEM259-207ENST00000589831 JPH4Q96JJ6 628 aa32.72■■■□□ 2.83
TMEM259-207ENST00000589831 SHROOM2Q13796 1616 aa32.67■■■□□ 2.82
TMEM259-207ENST00000589831 PRG4Q92954 1404 aaPredicted RBP32.64■■■□□ 2.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms