Protein–RNA interactions for Protein: P53999

SUB1, Activated RNA polymerase II transcriptional coactivator p15, humanhuman

Known RBP eCLIP

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1P53999 ATP7B-203ENST00000400366 6304 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.648e-6■■■□□ 15.4
SUB1P53999 HERC2P3-204ENST00000426501 5995 ntTSL 1 (best) BASIC10.97□□□□□ -0.658e-6■■■□□ 15.4
SUB1P53999 CDC42BPA-203ENST00000366766 10610 ntTSL 5 BASIC10.94□□□□□ -0.668e-6■■■□□ 15.4
SUB1P53999 CYBA-207ENST00000566534 1006 ntTSL 510.89□□□□□ -0.678e-6■■■□□ 15.4
SUB1P53999 CYBA-206ENST00000566229 405 ntTSL 310.89□□□□□ -0.678e-6■■■□□ 15.4
SUB1P53999 MRPL27-201ENST00000225969 716 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.78e-6■■■□□ 15.4
SUB1P53999 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC10.55□□□□□ -0.728e-6■■■□□ 15.4
SUB1P53999 HDLBP-203ENST00000391975 6372 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.728e-6■■■□□ 15.4
SUB1P53999 CDC42BPA-202ENST00000366764 10445 ntTSL 1 (best) BASIC10.51□□□□□ -0.738e-6■■■□□ 15.4
SUB1P53999 ATP7B-201ENST00000242839 6638 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.758e-6■■■□□ 15.4
SUB1P53999 HERC2P3-208ENST00000430598 4279 ntTSL 1 (best) BASIC10.3□□□□□ -0.768e-6■■■□□ 15.4
SUB1P53999 SUCLG2-201ENST00000307227 2352 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.778e-6■■■□□ 15.4
SUB1P53999 SCAF1-203ENST00000598359 662 ntAPPRIS ALT2 TSL 310.19□□□□□ -0.788e-6■■■□□ 15.4
SUB1P53999 CDC42BPA-205ENST00000366769 10855 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.88e-6■■■□□ 15.4
SUB1P53999 AP1B1-211ENST00000482818 3560 ntTSL 1 (best)10□□□□□ -0.818e-6■■■□□ 15.4
SUB1P53999 SCAF1-202ENST00000595242 463 ntAPPRIS ALT2 TSL 39.91□□□□□ -0.828e-6■■■□□ 15.4
SUB1P53999 CYBA-209ENST00000568278 439 ntTSL 59.89□□□□□ -0.838e-6■■■□□ 15.4
SUB1P53999 TMEM159-203ENST00000451578 1378 ntTSL 2 BASIC9.85□□□□□ -0.838e-6■■■□□ 15.4
SUB1P53999 ATP7B-212ENST00000634519 727 ntTSL 39.3□□□□□ -0.928e-6■■■□□ 15.4
SUB1P53999 HSPG2-212ENST00000493940 584 ntTSL 59.29□□□□□ -0.928e-6■■■□□ 15.4
SUB1P53999 SUCLG2-204ENST00000493112 1516 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.938e-6■■■□□ 15.4
SUB1P53999 AP1B1-204ENST00000405198 3838 ntTSL 5 BASIC9.21□□□□□ -0.938e-6■■■□□ 15.4
SUB1P53999 TMEM159-202ENST00000261388 1812 ntAPPRIS P1 TSL 2 BASIC9.19□□□□□ -0.948e-6■■■□□ 15.4
SUB1P53999 HERC2P3-205ENST00000428453 4383 ntTSL 28.94□□□□□ -0.988e-6■■■□□ 15.4
SUB1P53999 FHOD1-205ENST00000567509 563 ntTSL 48.82□□□□□ -18e-6■■■□□ 15.4
SUB1P53999 MRPS35-203ENST00000538315 1715 ntTSL 2 BASIC8.77□□□□□ -1.018e-6■■■□□ 15.4
SUB1P53999 HDLBP-202ENST00000373292 3297 ntTSL 58.72□□□□□ -1.018e-6■■■□□ 15.4
SUB1P53999 VARS2-210ENST00000490699 719 ntTSL 38.68□□□□□ -1.028e-6■■■□□ 15.4
SUB1P53999 EPRS-206ENST00000609181 2968 ntTSL 1 (best)8.58□□□□□ -1.048e-6■■■□□ 15.4
SUB1P53999 ATP7B-206ENST00000448424 6404 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.058e-6■■■□□ 15.4
SUB1P53999 HDLBP-201ENST00000310931 4571 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.088e-6■■■□□ 15.4
SUB1P53999 MRPS35-201ENST00000081029 1888 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.18e-6■■■□□ 15.4
SUB1P53999 MRPL27-202ENST00000442592 2441 ntTSL 2 BASIC8.08□□□□□ -1.128e-6■■■□□ 15.4
SUB1P53999 MAP4K4-206ENST00000413150 6958 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.128e-6■■■□□ 15.4
SUB1P53999 MAP4K4-201ENST00000302217 6624 ntTSL 1 (best) BASIC8.02□□□□□ -1.138e-6■■■□□ 15.4
SUB1P53999 FHOD1-206ENST00000567561 773 ntTSL 37.86□□□□□ -1.158e-6■■■□□ 15.4
SUB1P53999 TMEM159-207ENST00000573688 1495 ntTSL 27.66□□□□□ -1.188e-6■■■□□ 15.4
SUB1P53999 HERC2P3-206ENST00000429257 4088 ntBASIC7.58□□□□□ -1.28e-6■■■□□ 15.4
SUB1P53999 MAP4K4-219ENST00000625522 7458 ntAPPRIS P5 TSL 5 BASIC7.52□□□□□ -1.218e-6■■■□□ 15.4
SUB1P53999 STRAP-201ENST00000025399 1442 ntTSL 2 BASIC7.51□□□□□ -1.211e-10■■■□□ 15.4
SUB1P53999 ELF4-204ENST00000615377 3878 ntTSL 5 BASIC7.33□□□□□ -1.248e-6■■■□□ 15.4
SUB1P53999 DGUOK-206ENST00000489796 692 ntTSL 37.18□□□□□ -1.268e-6■■■□□ 15.4
SUB1P53999 IARS-210ENST00000474340 1748 ntTSL 27.17□□□□□ -1.268e-6■■■□□ 15.4
SUB1P53999 MRPL27-203ENST00000503633 742 ntTSL 3 BASIC7.13□□□□□ -1.278e-6■■■□□ 15.4
SUB1P53999 DGUOK-204ENST00000462551 573 ntTSL 27.08□□□□□ -1.288e-6■■■□□ 15.4
SUB1P53999 ELF4-202ENST00000335997 4145 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.288e-6■■■□□ 15.4
SUB1P53999 MAP4K4-212ENST00000456652 3855 ntTSL 5 BASIC6.93□□□□□ -1.38e-6■■■□□ 15.4
SUB1P53999 HERC2P3-209ENST00000437318 4161 ntTSL 1 (best)6.87□□□□□ -1.318e-6■■■□□ 15.4
SUB1P53999 MAP4K4-209ENST00000421882 3416 ntTSL 56.72□□□□□ -1.338e-6■■■□□ 15.4
SUB1P53999 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.58e-6■■■□□ 15.4
SUB1P53999 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC5.64□□□□□ -1.518e-6■■■□□ 15.4
SUB1P53999 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC5.61□□□□□ -1.518e-6■■■□□ 15.4
SUB1P53999 MRPL27-207ENST00000514928 397 ntTSL 25.12□□□□□ -1.598e-6■■■□□ 15.4
SUB1P53999 MAP4K4-207ENST00000417294 4251 ntTSL 54.87□□□□□ -1.638e-6■■■□□ 15.4
SUB1P53999 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC4.69□□□□□ -1.668e-6■■■□□ 15.4
SUB1P53999 TTC37-207ENST00000507805 1321 ntTSL 54.68□□□□□ -1.668e-6■■■□□ 15.4
SUB1P53999 HECTD1-210ENST00000555843 4281 ntTSL 24.1□□□□□ -1.758e-6■■■□□ 15.4
SUB1P53999 DGUOK-207ENST00000493055 593 ntTSL 24.04□□□□□ -1.768e-6■■■□□ 15.4
SUB1P53999 HECTD1-208ENST00000554882 3748 ntTSL 53.8□□□□□ -1.88e-6■■■□□ 15.4
SUB1P53999 HECTD1-214ENST00000556281 684 ntTSL 1 (best)3.57□□□□□ -1.848e-6■■■□□ 15.4
SUB1P53999 IARS-201ENST00000375627 697 ntTSL 3 BASIC2.56□□□□□ -28e-6■■■□□ 15.4
SUB1P53999 CNOT1-221ENST00000569924 493 ntTSL 22.42□□□□□ -2.028e-6■■■□□ 15.4
SUB1P53999 IARS-209ENST00000473915 610 ntTSL 31.71□□□□□ -2.148e-6■■■□□ 15.4
SUB1P53999 TRIM28-207ENST00000597136 1552 ntTSL 211.67□□□□□ -0.542e-9■■■□□ 15.4
SUB1P53999 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.112e-7■■■□□ 15.4
SUB1P53999 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.212e-7■■■□□ 15.4
SUB1P53999 RPLP0-226ENST00000552461 2591 ntTSL 213.02□□□□□ -0.322e-7■■■□□ 15.4
SUB1P53999 RPLP0-205ENST00000546989 993 ntTSL 5 BASIC9.62□□□□□ -0.872e-7■■■□□ 15.4
SUB1P53999 RPLP0-203ENST00000392514 1218 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.962e-7■■■□□ 15.4
SUB1P53999 RPLP0-214ENST00000549098 1106 ntTSL 28.52□□□□□ -1.052e-7■■■□□ 15.4
SUB1P53999 RPLP0-202ENST00000313104 912 ntTSL 1 (best) BASIC7.88□□□□□ -1.152e-7■■■□□ 15.4
SUB1P53999 HSPG2-203ENST00000374695 14327 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.162e-6■■■□□ 15.4
SUB1P53999 UBR4-205ENST00000417040 6175 ntTSL 510.82□□□□□ -0.687e-7■■■□□ 15.4
SUB1P53999 LYRM4-204ENST00000463032 1487 ntTSL 1 (best)10.45□□□□□ -0.742e-7■■■□□ 15.4
SUB1P53999 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC9.73□□□□□ -0.852e-7■■■□□ 15.4
SUB1P53999 LYRM4-203ENST00000458438 941 ntTSL 29.56□□□□□ -0.882e-7■■■□□ 15.4
SUB1P53999 LYRM4-205ENST00000464010 1401 ntTSL 3 BASIC9.37□□□□□ -0.912e-7■■■□□ 15.4
SUB1P53999 LYRM4-201ENST00000330636 7312 ntAPPRIS P3 TSL 1 (best) BASIC7.98□□□□□ -1.132e-7■■■□□ 15.4
SUB1P53999 LYRM4-209ENST00000606472 1005 ntTSL 26.82□□□□□ -1.322e-7■■■□□ 15.4
SUB1P53999 PSMD4-207ENST00000461434 801 ntTSL 27.99□□□□□ -1.132e-16■■■□□ 15.4
SUB1P53999 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.084e-7■■■□□ 15.4
SUB1P53999 RHOT2-222ENST00000569675 2559 ntTSL 214.57□□□□□ -0.084e-7■■■□□ 15.4
SUB1P53999 SRPK1-201ENST00000346162 4762 ntTSL 213.41□□□□□ -0.264e-8■■■□□ 15.4
SUB1P53999 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.314e-8■■■□□ 15.4
SUB1P53999 SRPK1-202ENST00000361690 4286 ntTSL 1 (best)8.12□□□□□ -1.114e-8■■■□□ 15.4
SUB1P53999 SRPK1-205ENST00000423325 4357 ntTSL 2 BASIC7.56□□□□□ -1.24e-8■■■□□ 15.4
SUB1P53999 CSDE1-215ENST00000533818 552 ntTSL 46.88□□□□□ -1.314e-8■■■□□ 15.4
SUB1P53999 CSDE1-211ENST00000525970 503 ntTSL 43.29□□□□□ -1.884e-8■■■□□ 15.4
SUB1P53999 CSDE1-212ENST00000529046 571 ntTSL 43.08□□□□□ -1.924e-8■■■□□ 15.4
SUB1P53999 CSDE1-209ENST00000525132 521 ntTSL 52.22□□□□□ -2.054e-8■■■□□ 15.4
SUB1P53999 CSDE1-208ENST00000524652 562 ntTSL 42.15□□□□□ -2.074e-8■■■□□ 15.4
SUB1P53999 CSDE1-210ENST00000525878 626 ntTSL 40.95□□□□□ -2.264e-8■■■□□ 15.4
SUB1P53999 HERC2-202ENST00000562136 632 ntTSL 29.11□□□□□ -0.951e-6■■■□□ 15.4
SUB1P53999 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC3.85□□□□□ -1.793e-8■■■□□ 15.4
SUB1P53999 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC13.05□□□□□ -0.323e-12■■■□□ 15.4
SUB1P53999 KDM5B-203ENST00000367265 10345 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.623e-12■■■□□ 15.4
SUB1P53999 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.232e-10■■■□□ 15.4
SUB1P53999 MCM4-215ENST00000523944 4105 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.652e-10■■■□□ 15.4
SUB1P53999 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.738e-6■■■□□ 15.3
SUB1P53999 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC17.21■□□□□ 0.358e-6■■■□□ 15.3
Retrieved 100 of 11,644 protein–RNA pairs in 19 ms