RNA–Protein interactions for RNA: ENST00000330636.8

LYRM4-201, Transcript of LYR motif containing 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LYRM4, Length 7,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM4-201ENST00000330636 PELP1Q8IZL8 1130 aaKnown RBP14.64□□□□□ -0.07
LYRM4-201ENST00000330636 MYT1Q01538 1121 aa14.45□□□□□ -0.1
LYRM4-201ENST00000330636 ERICH6Q7L0X2 663 aa14.35□□□□□ -0.11
LYRM4-201ENST00000330636 CCER1Q8TC90 406 aaPredicted RBP13.93□□□□□ -0.18
LYRM4-201ENST00000330636 TTBK1Q5TCY1 1321 aaPredicted RBP13.85□□□□□ -0.19
LYRM4-201ENST00000330636 CENPBP07199 599 aaPredicted RBP13.76□□□□□ -0.21
LYRM4-201ENST00000330636 DCAF8L2P0C7V8 631 aa13.58□□□□□ -0.24
LYRM4-201ENST00000330636 EHMT2Q96KQ7 1210 aa13.56□□□□□ -0.24
LYRM4-201ENST00000330636 YTHDC1Q96MU7 727 aaKnown RBP13.51□□□□□ -0.25
LYRM4-201ENST00000330636 NEFLP07196 543 aa13.41□□□□□ -0.26
LYRM4-201ENST00000330636 PCGF6Q9BYE7 350 aa13.39□□□□□ -0.27
LYRM4-201ENST00000330636 NISCHQ9Y2I1 1504 aa13.38□□□□□ -0.27
LYRM4-201ENST00000330636 SUPT5HO00267 1087 aaKnown RBP13.34□□□□□ -0.27
LYRM4-201ENST00000330636 DAXXQ9UER7 740 aaPredicted RBP13.3□□□□□ -0.28
LYRM4-201ENST00000330636 RTL5Q5HYW3 569 aaPredicted RBP13.18□□□□□ -0.3
LYRM4-201ENST00000330636 ZEB1P37275 1124 aaPredicted RBP13.12□□□□□ -0.31
LYRM4-201ENST00000330636 EIF5BO60841 1220 aaKnown RBP13.1□□□□□ -0.31
LYRM4-201ENST00000330636 RANGAP1P46060 587 aaPredicted RBP13.07□□□□□ -0.32
LYRM4-201ENST00000330636 APLP2Q06481 763 aa13.03□□□□□ -0.32
LYRM4-201ENST00000330636 ZNF316A6NFI3 1004 aaPredicted RBP12.99□□□□□ -0.33
LYRM4-201ENST00000330636 GLIPR1L2Q4G1C9 344 aa12.92□□□□□ -0.34
LYRM4-201ENST00000330636 FAM9AQ8IZU1 332 aaPredicted RBP12.77□□□□□ -0.37
LYRM4-201ENST00000330636 SHROOM4Q9ULL8 1493 aa12.73□□□□□ -0.37
LYRM4-201ENST00000330636 HRCP23327 699 aa12.72□□□□□ -0.37
LYRM4-201ENST00000330636 BCANQ96GW7 911 aa12.71□□□□□ -0.37
LYRM4-201ENST00000330636 GTF3C3Q9Y5Q9 886 aa12.7□□□□□ -0.38
LYRM4-201ENST00000330636 CLSPNQ9HAW4 1339 aa12.7□□□□□ -0.38
LYRM4-201ENST00000330636 PPARGC1BQ86YN6 1023 aaKnown RBP12.65□□□□□ -0.39
LYRM4-201ENST00000330636 CNGB1Q14028 1251 aaPredicted RBP12.61□□□□□ -0.39
LYRM4-201ENST00000330636 POLR3GLQ9BT43 218 aa12.56□□□□□ -0.4
LYRM4-201ENST00000330636 CDK11AQ9UQ88 783 aaPredicted RBP12.55□□□□□ -0.4
LYRM4-201ENST00000330636 ATP1B4Q9UN42 357 aaPredicted RBP12.48□□□□□ -0.41
LYRM4-201ENST00000330636 DIEXFQ68CQ4 756 aaKnown RBP12.46□□□□□ -0.41
LYRM4-201ENST00000330636 AMER1Q5JTC6 1135 aaPredicted RBP12.45□□□□□ -0.42
LYRM4-201ENST00000330636 NBR1Q14596 966 aa12.45□□□□□ -0.42
LYRM4-201ENST00000330636 NPM2Q86SE8 214 aaKnown RBP12.42□□□□□ -0.42
LYRM4-201ENST00000330636 ANP32AP39687 249 aaKnown RBP12.39□□□□□ -0.43
LYRM4-201ENST00000330636 TRIM26Q12899 539 aaPredicted RBP12.38□□□□□ -0.43
LYRM4-201ENST00000330636 ARXQ96QS3 562 aa12.38□□□□□ -0.43
LYRM4-201ENST00000330636 ANP32BQ92688 251 aaKnown RBP12.37□□□□□ -0.43
LYRM4-201ENST00000330636 TNNT2P45379 298 aaPredicted RBP12.31□□□□□ -0.44
LYRM4-201ENST00000330636 BCL11AQ9H165 835 aa12.3□□□□□ -0.44
LYRM4-201ENST00000330636 MYT1LQ9UL68 1186 aa12.29□□□□□ -0.44
LYRM4-201ENST00000330636 CDK11BP21127 795 aaKnown RBP12.29□□□□□ -0.44
LYRM4-201ENST00000330636 RTN4Q9NQC3 1192 aaKnown RBP12.29□□□□□ -0.44
LYRM4-201ENST00000330636 ACIN1Q9UKV3 1341 aaKnown RBP12.27□□□□□ -0.45
LYRM4-201ENST00000330636 SLC4A1APQ9BWU0 796 aaKnown RBP12.19□□□□□ -0.46
LYRM4-201ENST00000330636 ITGAEP38570 1179 aa12.18□□□□□ -0.46
LYRM4-201ENST00000330636 UBTFP17480 764 aaKnown RBP12.17□□□□□ -0.46
LYRM4-201ENST00000330636 NAP1L5Q96NT1 182 aaPredicted RBP12.14□□□□□ -0.47
LYRM4-201ENST00000330636 ZBTB47Q9UFB7 747 aaPredicted RBP12.14□□□□□ -0.47
LYRM4-201ENST00000330636 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.14□□□□□ -0.47
LYRM4-201ENST00000330636 TRIM41Q8WV44 630 aa12.13□□□□□ -0.47
LYRM4-201ENST00000330636 HSP90AA1P07900 732 aaKnown RBP12.09□□□□□ -0.47
LYRM4-201ENST00000330636 HNRNPUL2Q1KMD3 747 aaKnown RBP12.09□□□□□ -0.47
LYRM4-201ENST00000330636 FKBP8Q14318 412 aa12.09□□□□□ -0.47
LYRM4-201ENST00000330636 ANP32EQ9BTT0 268 aa12.09□□□□□ -0.47
LYRM4-201ENST00000330636 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.07□□□□□ -0.48
LYRM4-201ENST00000330636 CANXP27824 592 aaKnown RBP12.05□□□□□ -0.48
LYRM4-201ENST00000330636 ZNF326Q5BKZ1 582 aaKnown RBP12.04□□□□□ -0.48
LYRM4-201ENST00000330636 SLC24A1O60721 1099 aa12.04□□□□□ -0.48
LYRM4-201ENST00000330636 TRIM44Q96DX7 344 aaPredicted RBP12.04□□□□□ -0.48
LYRM4-201ENST00000330636 SCAF1Q9H7N4 1312 aaKnown RBP12.03□□□□□ -0.48
LYRM4-201ENST00000330636 ANP32CO43423 234 aa12□□□□□ -0.49
LYRM4-201ENST00000330636 ARID4BQ4LE39 1312 aaPredicted RBP11.98□□□□□ -0.49
LYRM4-201ENST00000330636 ABCC9O60706 1549 aa11.96□□□□□ -0.5
LYRM4-201ENST00000330636 DNTTIP2Q5QJE6 756 aaKnown RBP11.96□□□□□ -0.5
LYRM4-201ENST00000330636 CHIC1Q5VXU3 224 aa11.95□□□□□ -0.5
LYRM4-201ENST00000330636 ERICH6BQ5W0A0 696 aa11.91□□□□□ -0.5
LYRM4-201ENST00000330636 NCLP19338 710 aaKnown RBP11.9□□□□□ -0.5
LYRM4-201ENST00000330636 UPF2Q9HAU5 1272 aaKnown RBP11.9□□□□□ -0.5
LYRM4-201ENST00000330636 NEFMP07197 916 aa11.89□□□□□ -0.51
LYRM4-201ENST00000330636 ARID3AQ99856 593 aa11.89□□□□□ -0.51
LYRM4-201ENST00000330636 NEUROD1Q13562 356 aa11.88□□□□□ -0.51
LYRM4-201ENST00000330636 LOC105371045A0A1W2PR82 267 aa11.86□□□□□ -0.51
LYRM4-201ENST00000330636 PTMAP06454 111 aaKnown RBP11.85□□□□□ -0.51
LYRM4-201ENST00000330636 CCDC136Q96JN2 1154 aa11.85□□□□□ -0.51
LYRM4-201ENST00000330636 TNNT3P45378 269 aaPredicted RBP11.83□□□□□ -0.52
LYRM4-201ENST00000330636 DEKP35659 375 aaKnown RBP11.82□□□□□ -0.52
LYRM4-201ENST00000330636 A0A0U1RQG5 324 aaPredicted RBP11.81□□□□□ -0.52
LYRM4-201ENST00000330636 PABPN1Q86U42 306 aaKnown RBP eCLIP11.8□□□□□ -0.52
LYRM4-201ENST00000330636 IRX6P78412 446 aaPredicted RBP11.78□□□□□ -0.52
LYRM4-201ENST00000330636 CALRP27797 417 aaKnown RBP11.77□□□□□ -0.52
LYRM4-201ENST00000330636 TPRNQ4KMQ1 711 aa11.77□□□□□ -0.53
LYRM4-201ENST00000330636 LAS1LQ9Y4W2 734 aaKnown RBP11.76□□□□□ -0.53
LYRM4-201ENST00000330636 VSIG10Q8N0Z9 540 aa11.74□□□□□ -0.53
LYRM4-201ENST00000330636 PODXL2Q9NZ53 605 aa11.74□□□□□ -0.53
LYRM4-201ENST00000330636 ZBTB7CA1YPR0 619 aa11.71□□□□□ -0.53
LYRM4-201ENST00000330636 DDRGK1Q96HY6 314 aa11.71□□□□□ -0.53
LYRM4-201ENST00000330636 HNRNPUQ00839 825 aaKnown RBP eCLIP11.68□□□□□ -0.54
LYRM4-201ENST00000330636 PLCB2Q00722 1185 aa11.66□□□□□ -0.54
LYRM4-201ENST00000330636 SALL2Q9Y467 1007 aaPredicted RBP11.66□□□□□ -0.54
LYRM4-201ENST00000330636 BECN1Q14457 450 aa11.65□□□□□ -0.54
LYRM4-201ENST00000330636 NOP58Q9Y2X3 529 aaKnown RBP11.64□□□□□ -0.55
LYRM4-201ENST00000330636 GOLGA6L22H0YM25 854 aa11.63□□□□□ -0.55
LYRM4-201ENST00000330636 MSNP26038 577 aaKnown RBP11.63□□□□□ -0.55
LYRM4-201ENST00000330636 TRIM52Q96A61 297 aa11.63□□□□□ -0.55
LYRM4-201ENST00000330636 CSRNP3Q8WYN3 585 aa11.63□□□□□ -0.55
LYRM4-201ENST00000330636 APPP05067 770 aa11.62□□□□□ -0.55
LYRM4-201ENST00000330636 FAM9BQ8IZU0 186 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms