RNA–Protein interactions for RNA: ENST00000262105.6

MCM4-201, Transcript of minichromosome maintenance complex component 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MCM4, Length 4,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCM4-201ENST00000262105 NISCHQ9Y2I1 1504 aa31.91■■■□□ 2.7
MCM4-201ENST00000262105 DCAF8L2P0C7V8 631 aa29.7■■■□□ 2.34
MCM4-201ENST00000262105 SHROOM4Q9ULL8 1493 aa28.62■■■□□ 2.17
MCM4-201ENST00000262105 SUPT5HO00267 1087 aaKnown RBP28.26■■■□□ 2.11
MCM4-201ENST00000262105 ABCC9O60706 1549 aa27.01■■□□□ 1.91
MCM4-201ENST00000262105 CCDC180Q9P1Z9 1646 aa26.71■■□□□ 1.87
MCM4-201ENST00000262105 EHMT2Q96KQ7 1210 aa26.69■■□□□ 1.86
MCM4-201ENST00000262105 ZCCHC6Q5VYS8 1495 aaKnown RBP26.59■■□□□ 1.85
MCM4-201ENST00000262105 FAM9AQ8IZU1 332 aaPredicted RBP26.42■■□□□ 1.82
MCM4-201ENST00000262105 PABPN1Q86U42 306 aaKnown RBP eCLIP26.28■■□□□ 1.8
MCM4-201ENST00000262105 TRIM41Q8WV44 630 aa26.19■■□□□ 1.78
MCM4-201ENST00000262105 CHIC1Q5VXU3 224 aa26.02■■□□□ 1.76
MCM4-201ENST00000262105 SCRIBQ14160 1630 aa26.02■■□□□ 1.76
MCM4-201ENST00000262105 LOC105371045A0A1W2PR82 267 aa25.68■■□□□ 1.7
MCM4-201ENST00000262105 RANGAP1P46060 587 aaPredicted RBP25.63■■□□□ 1.69
MCM4-201ENST00000262105 TTBK1Q5TCY1 1321 aaPredicted RBP25.61■■□□□ 1.69
MCM4-201ENST00000262105 PCGF6Q9BYE7 350 aa25.58■■□□□ 1.69
MCM4-201ENST00000262105 DCAF1Q9Y4B6 1507 aa25.56■■□□□ 1.68
MCM4-201ENST00000262105 NACADO15069 1562 aa25.5■■□□□ 1.67
MCM4-201ENST00000262105 RB1CC1Q8TDY2 1594 aa25.5■■□□□ 1.67
MCM4-201ENST00000262105 UBTFP17480 764 aaKnown RBP25.48■■□□□ 1.67
MCM4-201ENST00000262105 APLP2Q06481 763 aa25.33■■□□□ 1.65
MCM4-201ENST00000262105 PPARGC1BQ86YN6 1023 aaKnown RBP25.3■■□□□ 1.64
MCM4-201ENST00000262105 RSF1Q96T23 1441 aaPredicted RBP25.28■■□□□ 1.64
MCM4-201ENST00000262105 CECR2Q9BXF3 1484 aa25.16■■□□□ 1.62
MCM4-201ENST00000262105 ATP1B4Q9UN42 357 aaPredicted RBP25.01■■□□□ 1.59
MCM4-201ENST00000262105 MYO15BQ96JP2 1530 aa24.96■■□□□ 1.59
MCM4-201ENST00000262105 MROH2BQ7Z745 1585 aa24.83■■□□□ 1.57
MCM4-201ENST00000262105 TRIM26Q12899 539 aaPredicted RBP24.8■■□□□ 1.56
MCM4-201ENST00000262105 BAZ1AQ9NRL2 1556 aaPredicted RBP24.77■■□□□ 1.56
MCM4-201ENST00000262105 CCER1Q8TC90 406 aaPredicted RBP24.68■■□□□ 1.54
MCM4-201ENST00000262105 CSRNP3Q8WYN3 585 aa24.67■■□□□ 1.54
MCM4-201ENST00000262105 BAZ1BQ9UIG0 1483 aaKnown RBP24.58■■□□□ 1.53
MCM4-201ENST00000262105 WIZO95785 1651 aa24.52■■□□□ 1.52
MCM4-201ENST00000262105 ITGAEP38570 1179 aa24.43■■□□□ 1.5
MCM4-201ENST00000262105 HNRNPUL2Q1KMD3 747 aaKnown RBP24.43■■□□□ 1.5
MCM4-201ENST00000262105 CCDC88BA6NC98 1476 aa24.39■■□□□ 1.49
MCM4-201ENST00000262105 HRCP23327 699 aa24.39■■□□□ 1.49
MCM4-201ENST00000262105 ZEB1P37275 1124 aaPredicted RBP24.36■■□□□ 1.49
MCM4-201ENST00000262105 WRNQ14191 1432 aaPredicted RBP eCLIP24.31■■□□□ 1.48
MCM4-201ENST00000262105 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.29■■□□□ 1.48
MCM4-201ENST00000262105 P3H3Q8IVL6 736 aa24.28■■□□□ 1.48
MCM4-201ENST00000262105 SMARCA4P51532 1647 aa24.26■■□□□ 1.47
MCM4-201ENST00000262105 FBLN2P98095 1184 aa24.21■■□□□ 1.47
MCM4-201ENST00000262105 TOP2AP11388 1531 aaKnown RBP24.19■■□□□ 1.46
MCM4-201ENST00000262105 ABCC8Q09428 1581 aa24.18■■□□□ 1.46
MCM4-201ENST00000262105 ATAD2BQ9ULI0 1458 aa24.17■■□□□ 1.46
MCM4-201ENST00000262105 SMARCA2P51531 1590 aa24.15■■□□□ 1.46
MCM4-201ENST00000262105 SOGA1O94964 1423 aa24.09■■□□□ 1.45
MCM4-201ENST00000262105 ARID3CA6NKF2 412 aa24■■□□□ 1.43
MCM4-201ENST00000262105 FAM50AQ14320 339 aaKnown RBP23.99■■□□□ 1.43
MCM4-201ENST00000262105 EEA1Q15075 1411 aa23.95■■□□□ 1.42
MCM4-201ENST00000262105 CEP162Q5TB80 1403 aa23.9■■□□□ 1.42
MCM4-201ENST00000262105 CLIP1P30622 1438 aa23.88■■□□□ 1.41
MCM4-201ENST00000262105 GOLGA3Q08378 1498 aa23.87■■□□□ 1.41
MCM4-201ENST00000262105 BICRAQ9NZM4 1560 aa23.86■■□□□ 1.41
MCM4-201ENST00000262105 KIF27Q86VH2 1401 aa23.84■■□□□ 1.41
MCM4-201ENST00000262105 EIF4G1Q04637 1599 aaKnown RBP23.79■■□□□ 1.4
MCM4-201ENST00000262105 TNIKQ9UKE5 1360 aa23.79■■□□□ 1.4
MCM4-201ENST00000262105 CADPSQ9ULU8 1353 aa23.76■■□□□ 1.39
MCM4-201ENST00000262105 CEP164Q9UPV0 1460 aa23.76■■□□□ 1.39
MCM4-201ENST00000262105 RUSC2Q8N2Y8 1516 aa23.72■■□□□ 1.39
MCM4-201ENST00000262105 CUX2O14529 1486 aa23.72■■□□□ 1.39
MCM4-201ENST00000262105 NCAPD3P42695 1498 aa23.68■■□□□ 1.38
MCM4-201ENST00000262105 UNC13AQ9UPW8 1703 aa23.66■■□□□ 1.38
MCM4-201ENST00000262105 MYT1LQ9UL68 1186 aa23.63■■□□□ 1.37
MCM4-201ENST00000262105 CHMP7Q8WUX9 453 aaPredicted RBP23.62■■□□□ 1.37
MCM4-201ENST00000262105 ERCC6Q03468 1493 aa23.58■■□□□ 1.37
MCM4-201ENST00000262105 CARMIL1Q5VZK9 1371 aa23.58■■□□□ 1.37
MCM4-201ENST00000262105 TDRD9Q8NDG6 1382 aaKnown RBP23.55■■□□□ 1.36
MCM4-201ENST00000262105 NEUROD1Q13562 356 aa23.55■■□□□ 1.36
MCM4-201ENST00000262105 YTHDC1Q96MU7 727 aaKnown RBP23.55■■□□□ 1.36
MCM4-201ENST00000262105 TRIM52Q96A61 297 aa23.53■■□□□ 1.36
MCM4-201ENST00000262105 PDS5BQ9NTI5 1447 aa23.53■■□□□ 1.36
MCM4-201ENST00000262105 FANCD2Q9BXW9 1451 aa23.47■■□□□ 1.35
MCM4-201ENST00000262105 ZNF777Q9ULD5 760 aaPredicted RBP23.46■■□□□ 1.35
MCM4-201ENST00000262105 RAPGEF2Q9Y4G8 1499 aa23.44■■□□□ 1.34
MCM4-201ENST00000262105 DNAJC5BQ9UF47 199 aa23.44■■□□□ 1.34
MCM4-201ENST00000262105 CC2D2AQ9P2K1 1620 aa23.41■■□□□ 1.34
MCM4-201ENST00000262105 CDK11AQ9UQ88 783 aaPredicted RBP23.39■■□□□ 1.33
MCM4-201ENST00000262105 MTUS2Q5JR59 1369 aa23.38■■□□□ 1.33
MCM4-201ENST00000262105 CENPBP07199 599 aaPredicted RBP23.36■■□□□ 1.33
MCM4-201ENST00000262105 DIEXFQ68CQ4 756 aaKnown RBP23.36■■□□□ 1.33
MCM4-201ENST00000262105 NESP48681 1621 aa23.33■■□□□ 1.33
MCM4-201ENST00000262105 CHIC2Q9UKJ5 165 aa23.33■■□□□ 1.33
MCM4-201ENST00000262105 CFTRP13569 1480 aa23.32■■□□□ 1.32
MCM4-201ENST00000262105 SYNJ1O43426 1573 aa23.31■■□□□ 1.32
MCM4-201ENST00000262105 HMGXB3Q12766 1538 aa23.3■■□□□ 1.32
MCM4-201ENST00000262105 POLR3GLQ9BT43 218 aa23.29■■□□□ 1.32
MCM4-201ENST00000262105 VPS8Q8N3P4 1428 aa23.28■■□□□ 1.32
MCM4-201ENST00000262105 KANK4Q5T7N3 995 aaPredicted RBP23.28■■□□□ 1.32
MCM4-201ENST00000262105 FGD5Q6ZNL6 1462 aa23.27■■□□□ 1.32
MCM4-201ENST00000262105 RAD54L2Q9Y4B4 1467 aa23.25■■□□□ 1.31
MCM4-201ENST00000262105 CNGB1Q14028 1251 aaPredicted RBP23.22■■□□□ 1.31
MCM4-201ENST00000262105 IGF1RP08069 1367 aa23.19■■□□□ 1.3
MCM4-201ENST00000262105 PEG3Q9GZU2 1588 aa23.19■■□□□ 1.3
MCM4-201ENST00000262105 ZNF316A6NFI3 1004 aaPredicted RBP23.15■■□□□ 1.3
MCM4-201ENST00000262105 ZNF326Q5BKZ1 582 aaKnown RBP23.13■■□□□ 1.29
MCM4-201ENST00000262105 CUX1P39880 1505 aa23.1■■□□□ 1.29
MCM4-201ENST00000262105 FHAD1B1AJZ9 1412 aa23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms