RNA–Protein interactions for RNA: ENST00000523944.5

MCM4-215, Transcript of minichromosome maintenance complex component 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MCM4, Length 4,105 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCM4-215ENST00000523944 NISCHQ9Y2I1 1504 aa23.64■■□□□ 1.37
MCM4-215ENST00000523944 DCAF8L2P0C7V8 631 aa22.83■■□□□ 1.25
MCM4-215ENST00000523944 SHROOM4Q9ULL8 1493 aa22.12■■□□□ 1.13
MCM4-215ENST00000523944 SUPT5HO00267 1087 aaKnown RBP22.09■■□□□ 1.13
MCM4-215ENST00000523944 EHMT2Q96KQ7 1210 aa21.12■□□□□ 0.97
MCM4-215ENST00000523944 FAM9AQ8IZU1 332 aaPredicted RBP20.74■□□□□ 0.91
MCM4-215ENST00000523944 PCGF6Q9BYE7 350 aa20.53■□□□□ 0.88
MCM4-215ENST00000523944 TTBK1Q5TCY1 1321 aaPredicted RBP20.34■□□□□ 0.85
MCM4-215ENST00000523944 TRIM41Q8WV44 630 aa20.32■□□□□ 0.84
MCM4-215ENST00000523944 CHIC1Q5VXU3 224 aa20.23■□□□□ 0.83
MCM4-215ENST00000523944 LOC105371045A0A1W2PR82 267 aa20.16■□□□□ 0.82
MCM4-215ENST00000523944 RANGAP1P46060 587 aaPredicted RBP20.07■□□□□ 0.8
MCM4-215ENST00000523944 PPARGC1BQ86YN6 1023 aaKnown RBP20.04■□□□□ 0.8
MCM4-215ENST00000523944 ABCC9O60706 1549 aa19.93■□□□□ 0.78
MCM4-215ENST00000523944 APLP2Q06481 763 aa19.87■□□□□ 0.77
MCM4-215ENST00000523944 UBTFP17480 764 aaKnown RBP19.83■□□□□ 0.77
MCM4-215ENST00000523944 HRCP23327 699 aa19.72■□□□□ 0.75
MCM4-215ENST00000523944 ZCCHC6Q5VYS8 1495 aaKnown RBP19.69■□□□□ 0.74
MCM4-215ENST00000523944 CCER1Q8TC90 406 aaPredicted RBP19.69■□□□□ 0.74
MCM4-215ENST00000523944 PABPN1Q86U42 306 aaKnown RBP eCLIP19.67■□□□□ 0.74
MCM4-215ENST00000523944 TRIM26Q12899 539 aaPredicted RBP19.64■□□□□ 0.73
MCM4-215ENST00000523944 ZEB1P37275 1124 aaPredicted RBP19.61■□□□□ 0.73
MCM4-215ENST00000523944 ATP1B4Q9UN42 357 aaPredicted RBP19.51■□□□□ 0.71
MCM4-215ENST00000523944 SCRIBQ14160 1630 aa19.36■□□□□ 0.69
MCM4-215ENST00000523944 CCDC180Q9P1Z9 1646 aa19.34■□□□□ 0.69
MCM4-215ENST00000523944 CENPBP07199 599 aaPredicted RBP19.3■□□□□ 0.68
MCM4-215ENST00000523944 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.27■□□□□ 0.68
MCM4-215ENST00000523944 HNRNPUL2Q1KMD3 747 aaKnown RBP19.27■□□□□ 0.67
MCM4-215ENST00000523944 ITGAEP38570 1179 aa19.21■□□□□ 0.67
MCM4-215ENST00000523944 YTHDC1Q96MU7 727 aaKnown RBP19.21■□□□□ 0.67
MCM4-215ENST00000523944 MYO15BQ96JP2 1530 aa19.19■□□□□ 0.66
MCM4-215ENST00000523944 PELP1Q8IZL8 1130 aaKnown RBP19.18■□□□□ 0.66
MCM4-215ENST00000523944 RSF1Q96T23 1441 aaPredicted RBP18.97■□□□□ 0.63
MCM4-215ENST00000523944 CSRNP3Q8WYN3 585 aa18.93■□□□□ 0.62
MCM4-215ENST00000523944 DIEXFQ68CQ4 756 aaKnown RBP18.81■□□□□ 0.6
MCM4-215ENST00000523944 CECR2Q9BXF3 1484 aa18.77■□□□□ 0.6
MCM4-215ENST00000523944 DCAF1Q9Y4B6 1507 aa18.77■□□□□ 0.59
MCM4-215ENST00000523944 P3H3Q8IVL6 736 aa18.71■□□□□ 0.59
MCM4-215ENST00000523944 FAM50AQ14320 339 aaKnown RBP18.7■□□□□ 0.58
MCM4-215ENST00000523944 RB1CC1Q8TDY2 1594 aa18.59■□□□□ 0.57
MCM4-215ENST00000523944 NEFLP07196 543 aa18.59■□□□□ 0.57
MCM4-215ENST00000523944 NACADO15069 1562 aa18.58■□□□□ 0.57
MCM4-215ENST00000523944 CNGB1Q14028 1251 aaPredicted RBP18.58■□□□□ 0.56
MCM4-215ENST00000523944 NEUROD1Q13562 356 aa18.56■□□□□ 0.56
MCM4-215ENST00000523944 ARID3CA6NKF2 412 aa18.54■□□□□ 0.56
MCM4-215ENST00000523944 POLR3GLQ9BT43 218 aa18.51■□□□□ 0.55
MCM4-215ENST00000523944 GTF3C3Q9Y5Q9 886 aa18.51■□□□□ 0.55
MCM4-215ENST00000523944 MROH2BQ7Z745 1585 aa18.49■□□□□ 0.55
MCM4-215ENST00000523944 ERICH6Q7L0X2 663 aa18.46■□□□□ 0.55
MCM4-215ENST00000523944 ZNF316A6NFI3 1004 aaPredicted RBP18.43■□□□□ 0.54
MCM4-215ENST00000523944 FBLN2P98095 1184 aa18.41■□□□□ 0.54
MCM4-215ENST00000523944 TRIM52Q96A61 297 aa18.38■□□□□ 0.53
MCM4-215ENST00000523944 CEP162Q5TB80 1403 aa18.36■□□□□ 0.53
MCM4-215ENST00000523944 ACIN1Q9UKV3 1341 aaKnown RBP18.35■□□□□ 0.53
MCM4-215ENST00000523944 WRNQ14191 1432 aaPredicted RBP eCLIP18.34■□□□□ 0.53
MCM4-215ENST00000523944 BAZ1AQ9NRL2 1556 aaPredicted RBP18.34■□□□□ 0.53
MCM4-215ENST00000523944 SOGA1O94964 1423 aa18.32■□□□□ 0.52
MCM4-215ENST00000523944 CLIP1P30622 1438 aa18.32■□□□□ 0.52
MCM4-215ENST00000523944 MYT1LQ9UL68 1186 aa18.31■□□□□ 0.52
MCM4-215ENST00000523944 BAZ1BQ9UIG0 1483 aaKnown RBP18.27■□□□□ 0.52
MCM4-215ENST00000523944 ABCC8Q09428 1581 aa18.26■□□□□ 0.51
MCM4-215ENST00000523944 WIZO95785 1651 aa18.24■□□□□ 0.51
MCM4-215ENST00000523944 CCDC88BA6NC98 1476 aa18.23■□□□□ 0.51
MCM4-215ENST00000523944 MYT1Q01538 1121 aa18.2■□□□□ 0.5
MCM4-215ENST00000523944 GOLGA3Q08378 1498 aa18.2■□□□□ 0.5
MCM4-215ENST00000523944 BCANQ96GW7 911 aa18.19■□□□□ 0.5
MCM4-215ENST00000523944 ZNF326Q5BKZ1 582 aaKnown RBP18.19■□□□□ 0.5
MCM4-215ENST00000523944 TNIKQ9UKE5 1360 aa18.18■□□□□ 0.5
MCM4-215ENST00000523944 EEA1Q15075 1411 aa18.14■□□□□ 0.5
MCM4-215ENST00000523944 SCAF1Q9H7N4 1312 aaKnown RBP18.14■□□□□ 0.49
MCM4-215ENST00000523944 ZNF777Q9ULD5 760 aaPredicted RBP18.12■□□□□ 0.49
MCM4-215ENST00000523944 CHIC2Q9UKJ5 165 aa18.1■□□□□ 0.49
MCM4-215ENST00000523944 HIRIP3Q9BW71 556 aaPredicted RBP18.07■□□□□ 0.48
MCM4-215ENST00000523944 MIER1Q8N108 512 aa18.06■□□□□ 0.48
MCM4-215ENST00000523944 CEP164Q9UPV0 1460 aa18.04■□□□□ 0.48
MCM4-215ENST00000523944 DDX10Q13206 875 aaKnown RBP18.03■□□□□ 0.48
MCM4-215ENST00000523944 ANP32CO43423 234 aa18.02■□□□□ 0.48
MCM4-215ENST00000523944 KIF27Q86VH2 1401 aa17.99■□□□□ 0.47
MCM4-215ENST00000523944 RUSC2Q8N2Y8 1516 aa17.98■□□□□ 0.47
MCM4-215ENST00000523944 MTUS2Q5JR59 1369 aa17.94■□□□□ 0.46
MCM4-215ENST00000523944 TOP2AP11388 1531 aaKnown RBP17.93■□□□□ 0.46
MCM4-215ENST00000523944 KANK4Q5T7N3 995 aaPredicted RBP17.92■□□□□ 0.46
MCM4-215ENST00000523944 TONSLQ96HA7 1378 aa17.91■□□□□ 0.46
MCM4-215ENST00000523944 RRP7BPQ9NSQ0 103 aa17.9■□□□□ 0.46
MCM4-215ENST00000523944 SLC4A1APQ9BWU0 796 aaKnown RBP17.87■□□□□ 0.45
MCM4-215ENST00000523944 CUX2O14529 1486 aa17.86■□□□□ 0.45
MCM4-215ENST00000523944 CDK11AQ9UQ88 783 aaPredicted RBP17.86■□□□□ 0.45
MCM4-215ENST00000523944 SMARCA4P51532 1647 aa17.85■□□□□ 0.45
MCM4-215ENST00000523944 SIN3AQ96ST3 1273 aa17.84■□□□□ 0.45
MCM4-215ENST00000523944 ATAD2BQ9ULI0 1458 aa17.82■□□□□ 0.44
MCM4-215ENST00000523944 CARMIL1Q5VZK9 1371 aa17.81■□□□□ 0.44
MCM4-215ENST00000523944 CHMP7Q8WUX9 453 aaPredicted RBP17.8■□□□□ 0.44
MCM4-215ENST00000523944 VPS8Q8N3P4 1428 aa17.8■□□□□ 0.44
MCM4-215ENST00000523944 FKBP8Q14318 412 aa17.78■□□□□ 0.44
MCM4-215ENST00000523944 RAPGEF2Q9Y4G8 1499 aa17.77■□□□□ 0.44
MCM4-215ENST00000523944 SMARCA2P51531 1590 aa17.76■□□□□ 0.43
MCM4-215ENST00000523944 CCNB3Q8WWL7 1395 aa17.72■□□□□ 0.43
MCM4-215ENST00000523944 HNRNPUQ00839 825 aaKnown RBP eCLIP17.71■□□□□ 0.43
MCM4-215ENST00000523944 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.7■□□□□ 0.427e-7■■■□□ 17.8
MCM4-215ENST00000523944 FAM9BQ8IZU0 186 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms