RNA–Protein interactions for RNA: ENST00000429257.5

HERC2P3-206, Transcript of hect domain and RLD 2 pseudogene 3, humanhuman

BASIC

Gene HERC2P3, Length 4,088 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2P3-206ENST00000429257 NISCHQ9Y2I1 1504 aa17.27■□□□□ 0.35
HERC2P3-206ENST00000429257 DCAF8L2P0C7V8 631 aa15.83■□□□□ 0.12
HERC2P3-206ENST00000429257 PELP1Q8IZL8 1130 aaKnown RBP15.74■□□□□ 0.11
HERC2P3-206ENST00000429257 HRCP23327 699 aa15.52■□□□□ 0.07
HERC2P3-206ENST00000429257 MYT1Q01538 1121 aa15.34■□□□□ 0.05
HERC2P3-206ENST00000429257 PCGF6Q9BYE7 350 aa15.17■□□□□ 0.02
HERC2P3-206ENST00000429257 SHROOM4Q9ULL8 1493 aa15.09■□□□□ 0.01
HERC2P3-206ENST00000429257 PPARGC1BQ86YN6 1023 aaKnown RBP15.07■□□□□ 0
HERC2P3-206ENST00000429257 SUPT5HO00267 1087 aaKnown RBP14.96□□□□□ -0.01
HERC2P3-206ENST00000429257 ABCC9O60706 1549 aa14.92□□□□□ -0.02
HERC2P3-206ENST00000429257 ZEB1P37275 1124 aaPredicted RBP14.78□□□□□ -0.04
HERC2P3-206ENST00000429257 SCAF1Q9H7N4 1312 aaKnown RBP14.73□□□□□ -0.05
HERC2P3-206ENST00000429257 CCDC180Q9P1Z9 1646 aa14.69□□□□□ -0.06
HERC2P3-206ENST00000429257 TRIM26Q12899 539 aaPredicted RBP14.62□□□□□ -0.07
HERC2P3-206ENST00000429257 CHIC1Q5VXU3 224 aa14.6□□□□□ -0.07
HERC2P3-206ENST00000429257 CENPBP07199 599 aaPredicted RBP14.56□□□□□ -0.08
HERC2P3-206ENST00000429257 DCAF1Q9Y4B6 1507 aa14.46□□□□□ -0.1
HERC2P3-206ENST00000429257 ACIN1Q9UKV3 1341 aaKnown RBP14.45□□□□□ -0.1
HERC2P3-206ENST00000429257 MYO15BQ96JP2 1530 aa14.44□□□□□ -0.1
HERC2P3-206ENST00000429257 GTF3C3Q9Y5Q9 886 aa14.39□□□□□ -0.11
HERC2P3-206ENST00000429257 TTBK1Q5TCY1 1321 aaPredicted RBP14.39□□□□□ -0.11
HERC2P3-206ENST00000429257 PABPN1Q86U42 306 aaKnown RBP eCLIP14.37□□□□□ -0.11
HERC2P3-206ENST00000429257 ZCCHC6Q5VYS8 1495 aaKnown RBP14.36□□□□□ -0.11
HERC2P3-206ENST00000429257 LOC105371045A0A1W2PR82 267 aa14.31□□□□□ -0.12
HERC2P3-206ENST00000429257 NEUROD1Q13562 356 aa14.3□□□□□ -0.12
HERC2P3-206ENST00000429257 SCRIBQ14160 1630 aa14.15□□□□□ -0.14
HERC2P3-206ENST00000429257 DIEXFQ68CQ4 756 aaKnown RBP14.14□□□□□ -0.15
HERC2P3-206ENST00000429257 CCER1Q8TC90 406 aaPredicted RBP14.12□□□□□ -0.15
HERC2P3-206ENST00000429257 RB1CC1Q8TDY2 1594 aa14.04□□□□□ -0.16
HERC2P3-206ENST00000429257 YTHDC1Q96MU7 727 aaKnown RBP14.04□□□□□ -0.16
HERC2P3-206ENST00000429257 NACADO15069 1562 aa13.99□□□□□ -0.17
HERC2P3-206ENST00000429257 BCL11AQ9H165 835 aa13.95□□□□□ -0.18
HERC2P3-206ENST00000429257 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.93□□□□□ -0.18
HERC2P3-206ENST00000429257 FAM9AQ8IZU1 332 aaPredicted RBP13.87□□□□□ -0.19
HERC2P3-206ENST00000429257 EHMT2Q96KQ7 1210 aa13.86□□□□□ -0.19
HERC2P3-206ENST00000429257 TRIM41Q8WV44 630 aa13.84□□□□□ -0.19
HERC2P3-206ENST00000429257 ANP32EQ9BTT0 268 aa13.84□□□□□ -0.19
HERC2P3-206ENST00000429257 ZNF316A6NFI3 1004 aaPredicted RBP13.78□□□□□ -0.2
HERC2P3-206ENST00000429257 CLSPNQ9HAW4 1339 aa13.75□□□□□ -0.21
HERC2P3-206ENST00000429257 ERICH6Q7L0X2 663 aa13.64□□□□□ -0.23
HERC2P3-206ENST00000429257 CECR2Q9BXF3 1484 aa13.63□□□□□ -0.23
HERC2P3-206ENST00000429257 MIER1Q8N108 512 aa13.61□□□□□ -0.23
HERC2P3-206ENST00000429257 CSRNP3Q8WYN3 585 aa13.59□□□□□ -0.23
HERC2P3-206ENST00000429257 SUPT16HQ9Y5B9 1047 aaKnown RBP13.54□□□□□ -0.24
HERC2P3-206ENST00000429257 RSF1Q96T23 1441 aaPredicted RBP13.52□□□□□ -0.24
HERC2P3-206ENST00000429257 TSHZ2Q9NRE2 1034 aa13.52□□□□□ -0.24
HERC2P3-206ENST00000429257 PRKCSHP14314 528 aaPredicted RBP13.49□□□□□ -0.25
HERC2P3-206ENST00000429257 NEFLP07196 543 aa13.47□□□□□ -0.25
HERC2P3-206ENST00000429257 MROH2BQ7Z745 1585 aa13.44□□□□□ -0.26
HERC2P3-206ENST00000429257 RANGAP1P46060 587 aaPredicted RBP13.43□□□□□ -0.26
HERC2P3-206ENST00000429257 BAZ1AQ9NRL2 1556 aaPredicted RBP13.4□□□□□ -0.26
HERC2P3-206ENST00000429257 BCANQ96GW7 911 aa13.4□□□□□ -0.26
HERC2P3-206ENST00000429257 MYT1LQ9UL68 1186 aa13.36□□□□□ -0.27
HERC2P3-206ENST00000429257 BAZ1BQ9UIG0 1483 aaKnown RBP13.34□□□□□ -0.27
HERC2P3-206ENST00000429257 HNRNPUL2Q1KMD3 747 aaKnown RBP13.31□□□□□ -0.28
HERC2P3-206ENST00000429257 FKBP8Q14318 412 aa13.29□□□□□ -0.28
HERC2P3-206ENST00000429257 WIZO95785 1651 aa13.29□□□□□ -0.28
HERC2P3-206ENST00000429257 BICRAQ9NZM4 1560 aa13.28□□□□□ -0.28
HERC2P3-206ENST00000429257 RBM19Q9Y4C8 960 aaKnown RBP13.27□□□□□ -0.29
HERC2P3-206ENST00000429257 UBTFP17480 764 aaKnown RBP13.26□□□□□ -0.29
HERC2P3-206ENST00000429257 UNC13AQ9UPW8 1703 aa13.26□□□□□ -0.29
HERC2P3-206ENST00000429257 APLP2Q06481 763 aa13.25□□□□□ -0.29
HERC2P3-206ENST00000429257 SMARCA4P51532 1647 aa13.23□□□□□ -0.29
HERC2P3-206ENST00000429257 ATAD2BQ9ULI0 1458 aa13.19□□□□□ -0.3
HERC2P3-206ENST00000429257 EIF4G1Q04637 1599 aaKnown RBP13.18□□□□□ -0.3
HERC2P3-206ENST00000429257 CDK11AQ9UQ88 783 aaPredicted RBP13.18□□□□□ -0.3
HERC2P3-206ENST00000429257 SMARCA2P51531 1590 aa13.16□□□□□ -0.3
HERC2P3-206ENST00000429257 DNAJC5BQ9UF47 199 aa13.13□□□□□ -0.31
HERC2P3-206ENST00000429257 CCDC88BA6NC98 1476 aa13.13□□□□□ -0.31
HERC2P3-206ENST00000429257 DEKP35659 375 aaKnown RBP13.11□□□□□ -0.31
HERC2P3-206ENST00000429257 ITGAEP38570 1179 aa13.1□□□□□ -0.31
HERC2P3-206ENST00000429257 ATP1B4Q9UN42 357 aaPredicted RBP13.1□□□□□ -0.31
HERC2P3-206ENST00000429257 RTL5Q5HYW3 569 aaPredicted RBP13.09□□□□□ -0.31
HERC2P3-206ENST00000429257 WRNQ14191 1432 aaPredicted RBP eCLIP13.08□□□□□ -0.32
HERC2P3-206ENST00000429257 TOP2AP11388 1531 aaKnown RBP13.06□□□□□ -0.32
HERC2P3-206ENST00000429257 CEP162Q5TB80 1403 aa13.06□□□□□ -0.32
HERC2P3-206ENST00000429257 FBLN2P98095 1184 aa13.05□□□□□ -0.32
HERC2P3-206ENST00000429257 CC2D2AQ9P2K1 1620 aa13.04□□□□□ -0.32
HERC2P3-206ENST00000429257 FANCIQ9NVI1 1328 aa13.04□□□□□ -0.32
HERC2P3-206ENST00000429257 ERICH6BQ5W0A0 696 aa13.02□□□□□ -0.33
HERC2P3-206ENST00000429257 ANO8Q9HCE9 1232 aaPredicted RBP13□□□□□ -0.33
HERC2P3-206ENST00000429257 ERCC6Q03468 1493 aa12.98□□□□□ -0.33
HERC2P3-206ENST00000429257 NCAPD3P42695 1498 aa12.97□□□□□ -0.33
HERC2P3-206ENST00000429257 MSH5O43196 834 aa12.97□□□□□ -0.33
HERC2P3-206ENST00000429257 NBR1Q14596 966 aa12.97□□□□□ -0.33
HERC2P3-206ENST00000429257 TNIKQ9UKE5 1360 aa12.96□□□□□ -0.33
HERC2P3-206ENST00000429257 ABCC8Q09428 1581 aa12.95□□□□□ -0.34
HERC2P3-206ENST00000429257 TRIM52Q96A61 297 aa12.94□□□□□ -0.34
HERC2P3-206ENST00000429257 ANP32CO43423 234 aa12.94□□□□□ -0.34
HERC2P3-206ENST00000429257 CADPSQ9ULU8 1353 aa12.93□□□□□ -0.34
HERC2P3-206ENST00000429257 DDX10Q13206 875 aaKnown RBP12.9□□□□□ -0.34
HERC2P3-206ENST00000429257 KCNH8Q96L42 1107 aa12.89□□□□□ -0.35
HERC2P3-206ENST00000429257 NOP58Q9Y2X3 529 aaKnown RBP12.89□□□□□ -0.35
HERC2P3-206ENST00000429257 NESP48681 1621 aa12.87□□□□□ -0.35
HERC2P3-206ENST00000429257 ANP32AP39687 249 aaKnown RBP12.87□□□□□ -0.35
HERC2P3-206ENST00000429257 P3H3Q8IVL6 736 aa12.85□□□□□ -0.35
HERC2P3-206ENST00000429257 SALL2Q9Y467 1007 aaPredicted RBP12.85□□□□□ -0.35
HERC2P3-206ENST00000429257 EIF5BO60841 1220 aaKnown RBP12.85□□□□□ -0.35
HERC2P3-206ENST00000429257 PDS5BQ9NTI5 1447 aa12.84□□□□□ -0.35
HERC2P3-206ENST00000429257 CCDC136Q96JN2 1154 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms