RNA–Protein interactions for RNA: ENST00000437318.5

HERC2P3-209, Transcript of hect domain and RLD 2 pseudogene 3, humanhuman

TSL 1 (best)

Gene HERC2P3, Length 4,161 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2P3-209ENST00000437318 NISCHQ9Y2I1 1504 aa17.17■□□□□ 0.34
HERC2P3-209ENST00000437318 DCAF8L2P0C7V8 631 aa15.72■□□□□ 0.11
HERC2P3-209ENST00000437318 SHROOM4Q9ULL8 1493 aa14.94□□□□□ -0.02
HERC2P3-209ENST00000437318 ABCC9O60706 1549 aa14.84□□□□□ -0.03
HERC2P3-209ENST00000437318 CCDC180Q9P1Z9 1646 aa14.62□□□□□ -0.07
HERC2P3-209ENST00000437318 SUPT5HO00267 1087 aaKnown RBP14.54□□□□□ -0.08
HERC2P3-209ENST00000437318 PABPN1Q86U42 306 aaKnown RBP eCLIP14.29□□□□□ -0.12
HERC2P3-209ENST00000437318 ZCCHC6Q5VYS8 1495 aaKnown RBP14.26□□□□□ -0.13
HERC2P3-209ENST00000437318 SCRIBQ14160 1630 aa14.05□□□□□ -0.16
HERC2P3-209ENST00000437318 RB1CC1Q8TDY2 1594 aa13.98□□□□□ -0.17
HERC2P3-209ENST00000437318 NACADO15069 1562 aa13.93□□□□□ -0.18
HERC2P3-209ENST00000437318 DCAF1Q9Y4B6 1507 aa13.82□□□□□ -0.2
HERC2P3-209ENST00000437318 EHMT2Q96KQ7 1210 aa13.7□□□□□ -0.22
HERC2P3-209ENST00000437318 PELP1Q8IZL8 1130 aaKnown RBP13.63□□□□□ -0.23
HERC2P3-209ENST00000437318 MYO15BQ96JP2 1530 aa13.63□□□□□ -0.23
HERC2P3-209ENST00000437318 FAM9AQ8IZU1 332 aaPredicted RBP13.58□□□□□ -0.23
HERC2P3-209ENST00000437318 CECR2Q9BXF3 1484 aa13.54□□□□□ -0.24
HERC2P3-209ENST00000437318 TRIM41Q8WV44 630 aa13.51□□□□□ -0.25
HERC2P3-209ENST00000437318 RSF1Q96T23 1441 aaPredicted RBP13.43□□□□□ -0.26
HERC2P3-209ENST00000437318 MYT1Q01538 1121 aa13.41□□□□□ -0.26
HERC2P3-209ENST00000437318 MROH2BQ7Z745 1585 aa13.34□□□□□ -0.27
HERC2P3-209ENST00000437318 BAZ1AQ9NRL2 1556 aaPredicted RBP13.33□□□□□ -0.28
HERC2P3-209ENST00000437318 CHIC1Q5VXU3 224 aa13.32□□□□□ -0.28
HERC2P3-209ENST00000437318 RANGAP1P46060 587 aaPredicted RBP13.3□□□□□ -0.28
HERC2P3-209ENST00000437318 BAZ1BQ9UIG0 1483 aaKnown RBP13.26□□□□□ -0.29
HERC2P3-209ENST00000437318 BICRAQ9NZM4 1560 aa13.22□□□□□ -0.29
HERC2P3-209ENST00000437318 UNC13AQ9UPW8 1703 aa13.19□□□□□ -0.3
HERC2P3-209ENST00000437318 WIZO95785 1651 aa13.19□□□□□ -0.3
HERC2P3-209ENST00000437318 UBTFP17480 764 aaKnown RBP13.16□□□□□ -0.3
HERC2P3-209ENST00000437318 SMARCA4P51532 1647 aa13.14□□□□□ -0.31
HERC2P3-209ENST00000437318 ATAD2BQ9ULI0 1458 aa13.12□□□□□ -0.31
HERC2P3-209ENST00000437318 EIF4G1Q04637 1599 aaKnown RBP13.11□□□□□ -0.31
HERC2P3-209ENST00000437318 LOC105371045A0A1W2PR82 267 aa13.11□□□□□ -0.31
HERC2P3-209ENST00000437318 PCGF6Q9BYE7 350 aa13.1□□□□□ -0.31
HERC2P3-209ENST00000437318 DNAJC5BQ9UF47 199 aa13.1□□□□□ -0.31
HERC2P3-209ENST00000437318 SMARCA2P51531 1590 aa13.09□□□□□ -0.31
HERC2P3-209ENST00000437318 TTBK1Q5TCY1 1321 aaPredicted RBP13.04□□□□□ -0.32
HERC2P3-209ENST00000437318 CCDC88BA6NC98 1476 aa13.04□□□□□ -0.32
HERC2P3-209ENST00000437318 ATP1B4Q9UN42 357 aaPredicted RBP12.99□□□□□ -0.33
HERC2P3-209ENST00000437318 CC2D2AQ9P2K1 1620 aa12.98□□□□□ -0.33
HERC2P3-209ENST00000437318 FBLN2P98095 1184 aa12.97□□□□□ -0.33
HERC2P3-209ENST00000437318 TOP2AP11388 1531 aaKnown RBP12.97□□□□□ -0.33
HERC2P3-209ENST00000437318 NCAPD3P42695 1498 aa12.93□□□□□ -0.34
HERC2P3-209ENST00000437318 APLP2Q06481 763 aa12.92□□□□□ -0.34
HERC2P3-209ENST00000437318 ERCC6Q03468 1493 aa12.91□□□□□ -0.34
HERC2P3-209ENST00000437318 PPARGC1BQ86YN6 1023 aaKnown RBP12.88□□□□□ -0.35
HERC2P3-209ENST00000437318 CADPSQ9ULU8 1353 aa12.87□□□□□ -0.35
HERC2P3-209ENST00000437318 WRNQ14191 1432 aaPredicted RBP eCLIP12.87□□□□□ -0.35
HERC2P3-209ENST00000437318 CSRNP3Q8WYN3 585 aa12.86□□□□□ -0.35
HERC2P3-209ENST00000437318 ERICH6Q7L0X2 663 aa12.83□□□□□ -0.36
HERC2P3-209ENST00000437318 ABCC8Q09428 1581 aa12.83□□□□□ -0.36
HERC2P3-209ENST00000437318 YTHDC1Q96MU7 727 aaKnown RBP12.82□□□□□ -0.36
HERC2P3-209ENST00000437318 CENPBP07199 599 aaPredicted RBP12.81□□□□□ -0.36
HERC2P3-209ENST00000437318 PDS5BQ9NTI5 1447 aa12.79□□□□□ -0.36
HERC2P3-209ENST00000437318 NESP48681 1621 aa12.79□□□□□ -0.36
HERC2P3-209ENST00000437318 P3H3Q8IVL6 736 aa12.75□□□□□ -0.37
HERC2P3-209ENST00000437318 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.74□□□□□ -0.37
HERC2P3-209ENST00000437318 HNRNPUL2Q1KMD3 747 aaKnown RBP12.74□□□□□ -0.37
HERC2P3-209ENST00000437318 HMGXB3Q12766 1538 aa12.74□□□□□ -0.37
HERC2P3-209ENST00000437318 FANCD2Q9BXW9 1451 aa12.72□□□□□ -0.37
HERC2P3-209ENST00000437318 CEP164Q9UPV0 1460 aa12.68□□□□□ -0.38
HERC2P3-209ENST00000437318 HRCP23327 699 aa12.68□□□□□ -0.38
HERC2P3-209ENST00000437318 CHMP7Q8WUX9 453 aaPredicted RBP12.68□□□□□ -0.38
HERC2P3-209ENST00000437318 SOGA1O94964 1423 aa12.67□□□□□ -0.38
HERC2P3-209ENST00000437318 TDRD9Q8NDG6 1382 aaKnown RBP12.67□□□□□ -0.38
HERC2P3-209ENST00000437318 ARID3CA6NKF2 412 aa12.66□□□□□ -0.38
HERC2P3-209ENST00000437318 PEG3Q9GZU2 1588 aa12.65□□□□□ -0.38
HERC2P3-209ENST00000437318 CUX2O14529 1486 aa12.64□□□□□ -0.39
HERC2P3-209ENST00000437318 CFTRP13569 1480 aa12.64□□□□□ -0.39
HERC2P3-209ENST00000437318 KIF27Q86VH2 1401 aa12.62□□□□□ -0.39
HERC2P3-209ENST00000437318 RAD54L2Q9Y4B4 1467 aa12.54□□□□□ -0.4
HERC2P3-209ENST00000437318 RUSC2Q8N2Y8 1516 aa12.54□□□□□ -0.4
HERC2P3-209ENST00000437318 ITGAEP38570 1179 aa12.53□□□□□ -0.4
HERC2P3-209ENST00000437318 FGD5Q6ZNL6 1462 aa12.52□□□□□ -0.41
HERC2P3-209ENST00000437318 CARMIL1Q5VZK9 1371 aa12.51□□□□□ -0.41
HERC2P3-209ENST00000437318 EEA1Q15075 1411 aa12.5□□□□□ -0.41
HERC2P3-209ENST00000437318 GTF3C3Q9Y5Q9 886 aa12.48□□□□□ -0.41
HERC2P3-209ENST00000437318 LAMC3Q9Y6N6 1575 aa12.46□□□□□ -0.41
HERC2P3-209ENST00000437318 SYNJ1O43426 1573 aa12.46□□□□□ -0.41
HERC2P3-209ENST00000437318 AQRO60306 1485 aaKnown RBP eCLIP12.45□□□□□ -0.421e-7■■■□□ 17.9
HERC2P3-209ENST00000437318 GOLGA3Q08378 1498 aa12.44□□□□□ -0.42
HERC2P3-209ENST00000437318 CUX1P39880 1505 aa12.44□□□□□ -0.42
HERC2P3-209ENST00000437318 TOPBP1Q92547 1522 aa12.44□□□□□ -0.42
HERC2P3-209ENST00000437318 MRC2Q9UBG0 1479 aa12.43□□□□□ -0.42
HERC2P3-209ENST00000437318 CLIP1P30622 1438 aa12.41□□□□□ -0.42
HERC2P3-209ENST00000437318 MYT1LQ9UL68 1186 aa12.4□□□□□ -0.42
HERC2P3-209ENST00000437318 POLA1P09884 1462 aaPredicted RBP12.39□□□□□ -0.43
HERC2P3-209ENST00000437318 CEP162Q5TB80 1403 aa12.38□□□□□ -0.43
HERC2P3-209ENST00000437318 GAPVD1Q14C86 1478 aa12.37□□□□□ -0.43
HERC2P3-209ENST00000437318 IGF1RP08069 1367 aa12.37□□□□□ -0.43
HERC2P3-209ENST00000437318 FAM50AQ14320 339 aaKnown RBP12.37□□□□□ -0.43
HERC2P3-209ENST00000437318 URB2Q14146 1524 aaKnown RBP12.36□□□□□ -0.43
HERC2P3-209ENST00000437318 TRIM26Q12899 539 aaPredicted RBP12.36□□□□□ -0.43
HERC2P3-209ENST00000437318 CCER1Q8TC90 406 aaPredicted RBP12.36□□□□□ -0.43
HERC2P3-209ENST00000437318 RAPGEF2Q9Y4G8 1499 aa12.35□□□□□ -0.43
HERC2P3-209ENST00000437318 TNIKQ9UKE5 1360 aa12.35□□□□□ -0.43
HERC2P3-209ENST00000437318 TOP2BQ02880 1626 aa12.34□□□□□ -0.43
HERC2P3-209ENST00000437318 DNMBPQ6XZF7 1577 aa12.33□□□□□ -0.44
HERC2P3-209ENST00000437318 EIF5BO60841 1220 aaKnown RBP12.31□□□□□ -0.44
HERC2P3-209ENST00000437318 NPM1P06748 294 aaKnown RBP eCLIP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms