RNA–Protein interactions for RNA: ENST00000426501.5

HERC2P3-204, Transcript of hect domain and RLD 2 pseudogene 3, humanhuman

TSL 1 (best) BASIC

Gene HERC2P3, Length 5,995 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2P3-204ENST00000426501 DCAF8L2P0C7V8 631 aa20.23■□□□□ 0.83
HERC2P3-204ENST00000426501 PELP1Q8IZL8 1130 aaKnown RBP18.99■□□□□ 0.63
HERC2P3-204ENST00000426501 SUPT5HO00267 1087 aaKnown RBP18.99■□□□□ 0.63
HERC2P3-204ENST00000426501 APLP2Q06481 763 aa18.64■□□□□ 0.57
HERC2P3-204ENST00000426501 FAM9AQ8IZU1 332 aaPredicted RBP18.61■□□□□ 0.57
HERC2P3-204ENST00000426501 EHMT2Q96KQ7 1210 aa18.56■□□□□ 0.56
HERC2P3-204ENST00000426501 SHROOM4Q9ULL8 1493 aa18.45■□□□□ 0.54
HERC2P3-204ENST00000426501 NISCHQ9Y2I1 1504 aa18.2■□□□□ 0.5
HERC2P3-204ENST00000426501 ERICH6Q7L0X2 663 aa18.16■□□□□ 0.5
HERC2P3-204ENST00000426501 CCER1Q8TC90 406 aaPredicted RBP18.15■□□□□ 0.5
HERC2P3-204ENST00000426501 TTBK1Q5TCY1 1321 aaPredicted RBP17.97■□□□□ 0.47
HERC2P3-204ENST00000426501 CENPBP07199 599 aaPredicted RBP17.93■□□□□ 0.46
HERC2P3-204ENST00000426501 ATP1B4Q9UN42 357 aaPredicted RBP17.87■□□□□ 0.45
HERC2P3-204ENST00000426501 PCGF6Q9BYE7 350 aa17.86■□□□□ 0.45
HERC2P3-204ENST00000426501 RANGAP1P46060 587 aaPredicted RBP17.83■□□□□ 0.44
HERC2P3-204ENST00000426501 ZEB1P37275 1124 aaPredicted RBP17.8■□□□□ 0.44
HERC2P3-204ENST00000426501 NEFLP07196 543 aa17.73■□□□□ 0.43
HERC2P3-204ENST00000426501 TRIM41Q8WV44 630 aa17.65■□□□□ 0.42
HERC2P3-204ENST00000426501 UBTFP17480 764 aaKnown RBP17.6■□□□□ 0.41
HERC2P3-204ENST00000426501 DAXXQ9UER7 740 aaPredicted RBP17.41■□□□□ 0.38
HERC2P3-204ENST00000426501 MYT1LQ9UL68 1186 aa17.41■□□□□ 0.38
HERC2P3-204ENST00000426501 MYT1Q01538 1121 aa17.39■□□□□ 0.37
HERC2P3-204ENST00000426501 YTHDC1Q96MU7 727 aaKnown RBP17.37■□□□□ 0.37
HERC2P3-204ENST00000426501 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.25■□□□□ 0.35
HERC2P3-204ENST00000426501 HNRNPUL2Q1KMD3 747 aaKnown RBP17.25■□□□□ 0.35
HERC2P3-204ENST00000426501 POLR3GLQ9BT43 218 aa17.21■□□□□ 0.35
HERC2P3-204ENST00000426501 ITGAEP38570 1179 aa17.07■□□□□ 0.32
HERC2P3-204ENST00000426501 SLC4A1APQ9BWU0 796 aaKnown RBP17.04■□□□□ 0.32
HERC2P3-204ENST00000426501 PPARGC1BQ86YN6 1023 aaKnown RBP17.03■□□□□ 0.32
HERC2P3-204ENST00000426501 TRIM26Q12899 539 aaPredicted RBP16.99■□□□□ 0.31
HERC2P3-204ENST00000426501 CHIC1Q5VXU3 224 aa16.99■□□□□ 0.31
HERC2P3-204ENST00000426501 ZNF316A6NFI3 1004 aaPredicted RBP16.94■□□□□ 0.3
HERC2P3-204ENST00000426501 CLSPNQ9HAW4 1339 aa16.93■□□□□ 0.3
HERC2P3-204ENST00000426501 CNGB1Q14028 1251 aaPredicted RBP16.92■□□□□ 0.3
HERC2P3-204ENST00000426501 RTL5Q5HYW3 569 aaPredicted RBP16.86■□□□□ 0.29
HERC2P3-204ENST00000426501 HRCP23327 699 aa16.77■□□□□ 0.27
HERC2P3-204ENST00000426501 ZBTB47Q9UFB7 747 aaPredicted RBP16.73■□□□□ 0.27
HERC2P3-204ENST00000426501 TRIM52Q96A61 297 aa16.66■□□□□ 0.26
HERC2P3-204ENST00000426501 FAM50AQ14320 339 aaKnown RBP16.64■□□□□ 0.25
HERC2P3-204ENST00000426501 NEFMP07197 916 aa16.53■□□□□ 0.24
HERC2P3-204ENST00000426501 SLC24A1O60721 1099 aa16.52■□□□□ 0.24
HERC2P3-204ENST00000426501 LOC105371045A0A1W2PR82 267 aa16.5■□□□□ 0.23
HERC2P3-204ENST00000426501 DIEXFQ68CQ4 756 aaKnown RBP16.5■□□□□ 0.23
HERC2P3-204ENST00000426501 CANXP27824 592 aaKnown RBP16.48■□□□□ 0.23
HERC2P3-204ENST00000426501 NEUROD1Q13562 356 aa16.47■□□□□ 0.23
HERC2P3-204ENST00000426501 ZNF326Q5BKZ1 582 aaKnown RBP16.46■□□□□ 0.23
HERC2P3-204ENST00000426501 BCANQ96GW7 911 aa16.45■□□□□ 0.22
HERC2P3-204ENST00000426501 ANP32CO43423 234 aa16.45■□□□□ 0.22
HERC2P3-204ENST00000426501 CDK11AQ9UQ88 783 aaPredicted RBP16.41■□□□□ 0.22
HERC2P3-204ENST00000426501 FBLN2P98095 1184 aa16.36■□□□□ 0.21
HERC2P3-204ENST00000426501 BCL11AQ9H165 835 aa16.34■□□□□ 0.21
HERC2P3-204ENST00000426501 ESF1Q9H501 851 aaKnown RBP16.27■□□□□ 0.19
HERC2P3-204ENST00000426501 ANP32AP39687 249 aaKnown RBP16.2■□□□□ 0.18
HERC2P3-204ENST00000426501 PABPN1Q86U42 306 aaKnown RBP eCLIP16.19■□□□□ 0.18
HERC2P3-204ENST00000426501 ANP32BQ92688 251 aaKnown RBP16.19■□□□□ 0.18
HERC2P3-204ENST00000426501 STAG3Q9UJ98 1225 aa16.13■□□□□ 0.17
HERC2P3-204ENST00000426501 HSP90AA1P07900 732 aaKnown RBP16.11■□□□□ 0.17
HERC2P3-204ENST00000426501 ZNF777Q9ULD5 760 aaPredicted RBP16.11■□□□□ 0.17
HERC2P3-204ENST00000426501 GTF3C3Q9Y5Q9 886 aa16.09■□□□□ 0.17
HERC2P3-204ENST00000426501 UPF2Q9HAU5 1272 aaKnown RBP16.07■□□□□ 0.16
HERC2P3-204ENST00000426501 ARID3CA6NKF2 412 aa16.06■□□□□ 0.16
HERC2P3-204ENST00000426501 ABCC9O60706 1549 aa16.04■□□□□ 0.16
HERC2P3-204ENST00000426501 CHGAP10645 457 aaKnown RBP16.03■□□□□ 0.16
HERC2P3-204ENST00000426501 NPM2Q86SE8 214 aaKnown RBP16.03■□□□□ 0.16
HERC2P3-204ENST00000426501 P3H3Q8IVL6 736 aa16.02■□□□□ 0.16
HERC2P3-204ENST00000426501 NPM1P06748 294 aaKnown RBP eCLIP16.01■□□□□ 0.15
HERC2P3-204ENST00000426501 PLPPR3Q6T4P5 718 aa15.95■□□□□ 0.14
HERC2P3-204ENST00000426501 CDK11BP21127 795 aaKnown RBP15.93■□□□□ 0.14
HERC2P3-204ENST00000426501 TONSLQ96HA7 1378 aa15.92■□□□□ 0.14
HERC2P3-204ENST00000426501 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.91■□□□□ 0.14
HERC2P3-204ENST00000426501 CSRNP3Q8WYN3 585 aa15.88■□□□□ 0.13
HERC2P3-204ENST00000426501 EIF5BO60841 1220 aaKnown RBP15.84■□□□□ 0.13
HERC2P3-204ENST00000426501 SCAF1Q9H7N4 1312 aaKnown RBP15.83■□□□□ 0.12
HERC2P3-204ENST00000426501 WDR43Q15061 677 aaKnown RBP eCLIP15.82■□□□□ 0.121e-6■■■□□ 18.3
HERC2P3-204ENST00000426501 GLIPR1L2Q4G1C9 344 aa15.82■□□□□ 0.12
HERC2P3-204ENST00000426501 MYH16Q9H6N6 1097 aa15.81■□□□□ 0.12
HERC2P3-204ENST00000426501 HNRNPUQ00839 825 aaKnown RBP eCLIP15.8■□□□□ 0.12
HERC2P3-204ENST00000426501 FKBP8Q14318 412 aa15.79■□□□□ 0.12
HERC2P3-204ENST00000426501 FAM9BQ8IZU0 186 aa15.79■□□□□ 0.12
HERC2P3-204ENST00000426501 ACIN1Q9UKV3 1341 aaKnown RBP15.78■□□□□ 0.12
HERC2P3-204ENST00000426501 TMC1Q8TDI8 760 aa15.78■□□□□ 0.12
HERC2P3-204ENST00000426501 A0A0G2JS52 829 aa15.78■□□□□ 0.12
HERC2P3-204ENST00000426501 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.76■□□□□ 0.11
HERC2P3-204ENST00000426501 CCDC136Q96JN2 1154 aa15.74■□□□□ 0.11
HERC2P3-204ENST00000426501 SALL2Q9Y467 1007 aaPredicted RBP15.74■□□□□ 0.11
HERC2P3-204ENST00000426501 TSPY4P0CV99 314 aa15.72■□□□□ 0.11
HERC2P3-204ENST00000426501 TSPY10P0CW01 314 aa15.72■□□□□ 0.11
HERC2P3-204ENST00000426501 NCLP19338 710 aaKnown RBP15.68■□□□□ 0.1
HERC2P3-204ENST00000426501 DDX10Q13206 875 aaKnown RBP15.67■□□□□ 0.1
HERC2P3-204ENST00000426501 ZBTB7CA1YPR0 619 aa15.66■□□□□ 0.1
HERC2P3-204ENST00000426501 PPP1R15AO75807 674 aaPredicted RBP15.65■□□□□ 0.1
HERC2P3-204ENST00000426501 C14orf37Q86TY3 774 aa15.65■□□□□ 0.1
HERC2P3-204ENST00000426501 CHIC2Q9UKJ5 165 aa15.64■□□□□ 0.09
HERC2P3-204ENST00000426501 KDM2AQ9Y2K7 1162 aa15.63■□□□□ 0.09
HERC2P3-204ENST00000426501 MRS2Q9HD23 443 aa15.62■□□□□ 0.09
HERC2P3-204ENST00000426501 ARXQ96QS3 562 aa15.61■□□□□ 0.09
HERC2P3-204ENST00000426501 HAP1P54257 671 aaPredicted RBP15.6■□□□□ 0.09
HERC2P3-204ENST00000426501 BECN1Q14457 450 aa15.59■□□□□ 0.09
HERC2P3-204ENST00000426501 ANP32EQ9BTT0 268 aa15.59■□□□□ 0.09
HERC2P3-204ENST00000426501 GOLGA6L22H0YM25 854 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms