RNA–Protein interactions for RNA: ENST00000461434.1

PSMD4-207, Transcript of proteasome 26S subunit, non-ATPase 4, humanhuman

TSL 2

Gene PSMD4, Length 801 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4-207ENST00000461434 NISCHQ9Y2I1 1504 aa26.7■■□□□ 1.86
PSMD4-207ENST00000461434 CHIC1Q5VXU3 224 aa25.92■■□□□ 1.74
PSMD4-207ENST00000461434 AEBP2Q6ZN18 517 aaPredicted RBP25.75■■□□□ 1.71
PSMD4-207ENST00000461434 CCDC180Q9P1Z9 1646 aa23.86■■□□□ 1.41
PSMD4-207ENST00000461434 ABCC9O60706 1549 aa23.81■■□□□ 1.4
PSMD4-207ENST00000461434 PHF23Q9BUL5 403 aaPredicted RBP22.96■■□□□ 1.27
PSMD4-207ENST00000461434 RB1CC1Q8TDY2 1594 aa22.66■■□□□ 1.22
PSMD4-207ENST00000461434 DCAF8L2P0C7V8 631 aa22.63■■□□□ 1.21
PSMD4-207ENST00000461434 NACADO15069 1562 aa22.51■■□□□ 1.19
PSMD4-207ENST00000461434 PABPN1Q86U42 306 aaKnown RBP eCLIP22.22■■□□□ 1.15
PSMD4-207ENST00000461434 UNC13AQ9UPW8 1703 aa22.18■■□□□ 1.14
PSMD4-207ENST00000461434 MYO15BQ96JP2 1530 aa22.16■■□□□ 1.14
PSMD4-207ENST00000461434 ZCCHC6Q5VYS8 1495 aaKnown RBP22.15■■□□□ 1.14
PSMD4-207ENST00000461434 DNAJC5BQ9UF47 199 aa22.14■■□□□ 1.13
PSMD4-207ENST00000461434 BICRAQ9NZM4 1560 aa21.98■■□□□ 1.11
PSMD4-207ENST00000461434 DCAF1Q9Y4B6 1507 aa21.97■■□□□ 1.11
PSMD4-207ENST00000461434 SCRIBQ14160 1630 aa21.88■■□□□ 1.09
PSMD4-207ENST00000461434 SHROOM4Q9ULL8 1493 aa21.61■■□□□ 1.05
PSMD4-207ENST00000461434 SENP3Q9H4L4 574 aaPredicted RBP21.59■■□□□ 1.05
PSMD4-207ENST00000461434 CC2D2AQ9P2K1 1620 aa21.47■■□□□ 1.03
PSMD4-207ENST00000461434 EIF4G1Q04637 1599 aaKnown RBP21.45■■□□□ 1.02
PSMD4-207ENST00000461434 CECR2Q9BXF3 1484 aa21.39■■□□□ 1.02
PSMD4-207ENST00000461434 PLPPR3Q6T4P5 718 aa21.39■■□□□ 1.01
PSMD4-207ENST00000461434 SMARCA4P51532 1647 aa20.82■□□□□ 0.92
PSMD4-207ENST00000461434 ATAD2BQ9ULI0 1458 aa20.77■□□□□ 0.92
PSMD4-207ENST00000461434 NCAPD3P42695 1498 aa20.75■□□□□ 0.91
PSMD4-207ENST00000461434 BAZ1AQ9NRL2 1556 aaPredicted RBP20.72■□□□□ 0.91
PSMD4-207ENST00000461434 SMARCA2P51531 1590 aa20.71■□□□□ 0.91
PSMD4-207ENST00000461434 HMGXB3Q12766 1538 aa20.64■□□□□ 0.9
PSMD4-207ENST00000461434 BAZ1BQ9UIG0 1483 aaKnown RBP20.62■□□□□ 0.89
PSMD4-207ENST00000461434 MROH2BQ7Z745 1585 aa20.61■□□□□ 0.89
PSMD4-207ENST00000461434 ERCC6Q03468 1493 aa20.55■□□□□ 0.88
PSMD4-207ENST00000461434 PEG3Q9GZU2 1588 aa20.52■□□□□ 0.88
PSMD4-207ENST00000461434 NESP48681 1621 aa20.49■□□□□ 0.87
PSMD4-207ENST00000461434 WIZO95785 1651 aa20.41■□□□□ 0.86
PSMD4-207ENST00000461434 CUX2O14529 1486 aa20.36■□□□□ 0.85
PSMD4-207ENST00000461434 LAMC3Q9Y6N6 1575 aa20.29■□□□□ 0.84
PSMD4-207ENST00000461434 KIF21AQ7Z4S6 1674 aa20.23■□□□□ 0.83
PSMD4-207ENST00000461434 RSF1Q96T23 1441 aaPredicted RBP20.21■□□□□ 0.83
PSMD4-207ENST00000461434 THOC2Q8NI27 1593 aaKnown RBP20.21■□□□□ 0.83
PSMD4-207ENST00000461434 PDS5BQ9NTI5 1447 aa20.19■□□□□ 0.82
PSMD4-207ENST00000461434 CADPSQ9ULU8 1353 aa20.18■□□□□ 0.82
PSMD4-207ENST00000461434 DNAJC5Q9H3Z4 198 aa20.15■□□□□ 0.82
PSMD4-207ENST00000461434 ADRA2BP18089 450 aa20.13■□□□□ 0.81
PSMD4-207ENST00000461434 TOP2AP11388 1531 aaKnown RBP20.11■□□□□ 0.81
PSMD4-207ENST00000461434 MRC2Q9UBG0 1479 aa20.03■□□□□ 0.8
PSMD4-207ENST00000461434 FOXD1Q16676 465 aa20.02■□□□□ 0.8
PSMD4-207ENST00000461434 CEP164Q9UPV0 1460 aa19.99■□□□□ 0.79
PSMD4-207ENST00000461434 PPP6R1Q9UPN7 881 aa19.99■□□□□ 0.79
PSMD4-207ENST00000461434 FANCD2Q9BXW9 1451 aa19.99■□□□□ 0.79
PSMD4-207ENST00000461434 CFTRP13569 1480 aa19.97■□□□□ 0.79
PSMD4-207ENST00000461434 WDR62O43379 1518 aa19.95■□□□□ 0.78
PSMD4-207ENST00000461434 CCDC88BA6NC98 1476 aa19.89■□□□□ 0.77
PSMD4-207ENST00000461434 PRDM2Q13029 1718 aa19.82■□□□□ 0.76
PSMD4-207ENST00000461434 URB2Q14146 1524 aaKnown RBP19.81■□□□□ 0.76
PSMD4-207ENST00000461434 TOPBP1Q92547 1522 aa19.62■□□□□ 0.73
PSMD4-207ENST00000461434 SUPT5HO00267 1087 aaKnown RBP19.59■□□□□ 0.73
PSMD4-207ENST00000461434 KCNA4P22459 653 aa19.58■□□□□ 0.72
PSMD4-207ENST00000461434 ZNF608Q9ULD9 1512 aaPredicted RBP19.56■□□□□ 0.72
PSMD4-207ENST00000461434 IFT140Q96RY7 1462 aa19.56■□□□□ 0.72
PSMD4-207ENST00000461434 DNMBPQ6XZF7 1577 aa19.56■□□□□ 0.72
PSMD4-207ENST00000461434 ABCC8Q09428 1581 aa19.53■□□□□ 0.72
PSMD4-207ENST00000461434 TRIM41Q8WV44 630 aa19.5■□□□□ 0.71
PSMD4-207ENST00000461434 OSCARQ8IYS5 282 aa19.48■□□□□ 0.71
PSMD4-207ENST00000461434 EIF4G3O43432 1585 aaKnown RBP19.45■□□□□ 0.7
PSMD4-207ENST00000461434 POLA1P09884 1462 aaPredicted RBP19.42■□□□□ 0.7
PSMD4-207ENST00000461434 AQRO60306 1485 aaKnown RBP eCLIP19.41■□□□□ 0.73e-8■■■■□ 24.7
PSMD4-207ENST00000461434 RAD54L2Q9Y4B4 1467 aa19.41■□□□□ 0.7
PSMD4-207ENST00000461434 TARBP1Q13395 1621 aaKnown RBP19.4■□□□□ 0.7
PSMD4-207ENST00000461434 CUX1P39880 1505 aa19.35■□□□□ 0.69
PSMD4-207ENST00000461434 FGD5Q6ZNL6 1462 aa19.35■□□□□ 0.69
PSMD4-207ENST00000461434 SOGA1O94964 1423 aa19.35■□□□□ 0.69
PSMD4-207ENST00000461434 FBLN2P98095 1184 aa19.32■□□□□ 0.68
PSMD4-207ENST00000461434 TDRD9Q8NDG6 1382 aaKnown RBP19.32■□□□□ 0.68
PSMD4-207ENST00000461434 CHD1O14646 1710 aa19.31■□□□□ 0.68
PSMD4-207ENST00000461434 RIMBP3CA6NJZ7 1639 aa19.25■□□□□ 0.67
PSMD4-207ENST00000461434 RIMBP3BA6NNM3 1639 aa19.25■□□□□ 0.67
PSMD4-207ENST00000461434 RIMBP3Q9UFD9 1639 aa19.25■□□□□ 0.67
PSMD4-207ENST00000461434 EHMT2Q96KQ7 1210 aa19.24■□□□□ 0.67
PSMD4-207ENST00000461434 SNAPC4Q5SXM2 1469 aa19.22■□□□□ 0.67
PSMD4-207ENST00000461434 ARHGEF11O15085 1522 aa19.19■□□□□ 0.66
PSMD4-207ENST00000461434 WDR97A6NE52 1622 aa19.18■□□□□ 0.66
PSMD4-207ENST00000461434 GRIN2BQ13224 1484 aa19.15■□□□□ 0.66
PSMD4-207ENST00000461434 CHMP7Q8WUX9 453 aaPredicted RBP19.14■□□□□ 0.65
PSMD4-207ENST00000461434 PBRM1Q86U86 1689 aa19.14■□□□□ 0.65
PSMD4-207ENST00000461434 GAPVD1Q14C86 1478 aa19.12■□□□□ 0.65
PSMD4-207ENST00000461434 MAGI1Q96QZ7 1491 aaPredicted RBP19.11■□□□□ 0.65
PSMD4-207ENST00000461434 SYNJ1O43426 1573 aa19.1■□□□□ 0.65
PSMD4-207ENST00000461434 ABCA10Q8WWZ4 1543 aa19.1■□□□□ 0.65
PSMD4-207ENST00000461434 WRNQ14191 1432 aaPredicted RBP eCLIP19.09■□□□□ 0.65
PSMD4-207ENST00000461434 CYB5RLQ6IPT4 315 aa19.08■□□□□ 0.64
PSMD4-207ENST00000461434 ABCA5Q8WWZ7 1642 aa19.07■□□□□ 0.64
PSMD4-207ENST00000461434 TOP2BQ02880 1626 aa19.07■□□□□ 0.64
PSMD4-207ENST00000461434 BIVM-ERCC5R4GMW8 1640 aa19.07■□□□□ 0.64
PSMD4-207ENST00000461434 SYNJ2O15056 1496 aa19.06■□□□□ 0.64
PSMD4-207ENST00000461434 PIAS4Q8N2W9 510 aaPredicted RBP19.04■□□□□ 0.64
PSMD4-207ENST00000461434 ARAP1Q96P48 1450 aa19.03■□□□□ 0.64
PSMD4-207ENST00000461434 CLASP1Q7Z460 1538 aa19.02■□□□□ 0.64
PSMD4-207ENST00000461434 PPP4R3CPQ6ZMV5 832 aa19.01■□□□□ 0.63
PSMD4-207ENST00000461434 ADAMTS12P58397 1594 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms