RNA–Protein interactions for RNA: ENST00000538315.5

MRPS35-203, Transcript of mitochondrial ribosomal protein S35, humanhuman

TSL 2 BASIC

Gene MRPS35, Length 1,715 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS35-203ENST00000538315 NISCHQ9Y2I1 1504 aa26.84■■□□□ 1.89
MRPS35-203ENST00000538315 CCDC180Q9P1Z9 1646 aa23.75■■□□□ 1.39
MRPS35-203ENST00000538315 ABCC9O60706 1549 aa23.01■■□□□ 1.27
MRPS35-203ENST00000538315 ZCCHC6Q5VYS8 1495 aaKnown RBP22.41■■□□□ 1.18
MRPS35-203ENST00000538315 DCAF8L2P0C7V8 631 aa22.4■■□□□ 1.18
MRPS35-203ENST00000538315 NACADO15069 1562 aa22.25■■□□□ 1.15
MRPS35-203ENST00000538315 RB1CC1Q8TDY2 1594 aa22.23■■□□□ 1.15
MRPS35-203ENST00000538315 DCAF1Q9Y4B6 1507 aa22.18■■□□□ 1.14
MRPS35-203ENST00000538315 MYO15BQ96JP2 1530 aa22.16■■□□□ 1.14
MRPS35-203ENST00000538315 UNC13AQ9UPW8 1703 aa21.77■■□□□ 1.07
MRPS35-203ENST00000538315 SCRIBQ14160 1630 aa21.74■■□□□ 1.07
MRPS35-203ENST00000538315 PABPN1Q86U42 306 aaKnown RBP eCLIP21.55■■□□□ 1.04
MRPS35-203ENST00000538315 BICRAQ9NZM4 1560 aa21.52■■□□□ 1.04
MRPS35-203ENST00000538315 SHROOM4Q9ULL8 1493 aa21.44■■□□□ 1.02
MRPS35-203ENST00000538315 EIF4G1Q04637 1599 aaKnown RBP20.95■□□□□ 0.94
MRPS35-203ENST00000538315 CECR2Q9BXF3 1484 aa20.89■□□□□ 0.93
MRPS35-203ENST00000538315 DNAJC5BQ9UF47 199 aa20.82■□□□□ 0.92
MRPS35-203ENST00000538315 CC2D2AQ9P2K1 1620 aa20.81■□□□□ 0.92
MRPS35-203ENST00000538315 BAZ1AQ9NRL2 1556 aaPredicted RBP20.8■□□□□ 0.92
MRPS35-203ENST00000538315 SMARCA4P51532 1647 aa20.78■□□□□ 0.92
MRPS35-203ENST00000538315 MROH2BQ7Z745 1585 aa20.7■□□□□ 0.9
MRPS35-203ENST00000538315 SMARCA2P51531 1590 aa20.58■□□□□ 0.89
MRPS35-203ENST00000538315 ATAD2BQ9ULI0 1458 aa20.58■□□□□ 0.88
MRPS35-203ENST00000538315 RSF1Q96T23 1441 aaPredicted RBP20.55■□□□□ 0.88
MRPS35-203ENST00000538315 PEG3Q9GZU2 1588 aa20.54■□□□□ 0.88
MRPS35-203ENST00000538315 WIZO95785 1651 aa20.52■□□□□ 0.88
MRPS35-203ENST00000538315 NCAPD3P42695 1498 aa20.5■□□□□ 0.87
MRPS35-203ENST00000538315 BAZ1BQ9UIG0 1483 aaKnown RBP20.46■□□□□ 0.87
MRPS35-203ENST00000538315 HMGXB3Q12766 1538 aa20.45■□□□□ 0.86
MRPS35-203ENST00000538315 SUPT5HO00267 1087 aaKnown RBP20.32■□□□□ 0.84
MRPS35-203ENST00000538315 TOP2AP11388 1531 aaKnown RBP20.29■□□□□ 0.84
MRPS35-203ENST00000538315 CCDC88BA6NC98 1476 aa20.04■□□□□ 0.8
MRPS35-203ENST00000538315 NESP48681 1621 aa19.98■□□□□ 0.79
MRPS35-203ENST00000538315 LAMC3Q9Y6N6 1575 aa19.95■□□□□ 0.78
MRPS35-203ENST00000538315 CADPSQ9ULU8 1353 aa19.94■□□□□ 0.78
MRPS35-203ENST00000538315 CFTRP13569 1480 aa19.88■□□□□ 0.77
MRPS35-203ENST00000538315 ERCC6Q03468 1493 aa19.83■□□□□ 0.76
MRPS35-203ENST00000538315 PRDM2Q13029 1718 aa19.81■□□□□ 0.76
MRPS35-203ENST00000538315 PDS5BQ9NTI5 1447 aa19.81■□□□□ 0.76
MRPS35-203ENST00000538315 KIF21AQ7Z4S6 1674 aa19.78■□□□□ 0.76
MRPS35-203ENST00000538315 FANCD2Q9BXW9 1451 aa19.74■□□□□ 0.75
MRPS35-203ENST00000538315 CEP164Q9UPV0 1460 aa19.69■□□□□ 0.74
MRPS35-203ENST00000538315 THOC2Q8NI27 1593 aaKnown RBP19.61■□□□□ 0.73
MRPS35-203ENST00000538315 MRC2Q9UBG0 1479 aa19.59■□□□□ 0.73
MRPS35-203ENST00000538315 URB2Q14146 1524 aaKnown RBP19.51■□□□□ 0.71
MRPS35-203ENST00000538315 WDR62O43379 1518 aa19.5■□□□□ 0.71
MRPS35-203ENST00000538315 CUX2O14529 1486 aa19.46■□□□□ 0.71
MRPS35-203ENST00000538315 DNMBPQ6XZF7 1577 aa19.45■□□□□ 0.7
MRPS35-203ENST00000538315 TOPBP1Q92547 1522 aa19.45■□□□□ 0.7
MRPS35-203ENST00000538315 ABCC8Q09428 1581 aa19.45■□□□□ 0.7
MRPS35-203ENST00000538315 CUX1P39880 1505 aa19.4■□□□□ 0.7
MRPS35-203ENST00000538315 WRNQ14191 1432 aaPredicted RBP eCLIP19.39■□□□□ 0.69
MRPS35-203ENST00000538315 SYNJ1O43426 1573 aa19.33■□□□□ 0.69
MRPS35-203ENST00000538315 TOP2BQ02880 1626 aa19.32■□□□□ 0.68
MRPS35-203ENST00000538315 BIVM-ERCC5R4GMW8 1640 aa19.31■□□□□ 0.68
MRPS35-203ENST00000538315 POLA1P09884 1462 aaPredicted RBP19.3■□□□□ 0.68
MRPS35-203ENST00000538315 FGD5Q6ZNL6 1462 aa19.3■□□□□ 0.68
MRPS35-203ENST00000538315 IFT140Q96RY7 1462 aa19.25■□□□□ 0.67
MRPS35-203ENST00000538315 SOGA1O94964 1423 aa19.23■□□□□ 0.67
MRPS35-203ENST00000538315 RAD54L2Q9Y4B4 1467 aa19.22■□□□□ 0.67
MRPS35-203ENST00000538315 TARBP1Q13395 1621 aaKnown RBP19.21■□□□□ 0.67
MRPS35-203ENST00000538315 TRIM41Q8WV44 630 aa19.15■□□□□ 0.66
MRPS35-203ENST00000538315 ZNF608Q9ULD9 1512 aaPredicted RBP19.15■□□□□ 0.66
MRPS35-203ENST00000538315 WDR97A6NE52 1622 aa19.13■□□□□ 0.65
MRPS35-203ENST00000538315 ABCA10Q8WWZ4 1543 aa19.11■□□□□ 0.65
MRPS35-203ENST00000538315 EIF4G3O43432 1585 aaKnown RBP19.11■□□□□ 0.65
MRPS35-203ENST00000538315 TDRD9Q8NDG6 1382 aaKnown RBP19.1■□□□□ 0.65
MRPS35-203ENST00000538315 AQRO60306 1485 aaKnown RBP eCLIP19.08■□□□□ 0.651e-6■■■□□ 14.7
MRPS35-203ENST00000538315 CHIC1Q5VXU3 224 aa19.08■□□□□ 0.64
MRPS35-203ENST00000538315 ABCA5Q8WWZ7 1642 aa19.02■□□□□ 0.64
MRPS35-203ENST00000538315 GAPVD1Q14C86 1478 aa19.01■□□□□ 0.63
MRPS35-203ENST00000538315 PBRM1Q86U86 1689 aa18.99■□□□□ 0.63
MRPS35-203ENST00000538315 GRIN2BQ13224 1484 aa18.97■□□□□ 0.63
MRPS35-203ENST00000538315 KIF27Q86VH2 1401 aa18.96■□□□□ 0.63
MRPS35-203ENST00000538315 SNAPC4Q5SXM2 1469 aa18.92■□□□□ 0.62
MRPS35-203ENST00000538315 ERICH3Q5RHP9 1530 aa18.89■□□□□ 0.61
MRPS35-203ENST00000538315 MAGI1Q96QZ7 1491 aaPredicted RBP18.89■□□□□ 0.61
MRPS35-203ENST00000538315 RUSC2Q8N2Y8 1516 aa18.88■□□□□ 0.61
MRPS35-203ENST00000538315 FBLN2P98095 1184 aa18.86■□□□□ 0.61
MRPS35-203ENST00000538315 CHD1O14646 1710 aa18.84■□□□□ 0.61
MRPS35-203ENST00000538315 IGF1RP08069 1367 aa18.83■□□□□ 0.6
MRPS35-203ENST00000538315 ADAMTS12P58397 1594 aa18.82■□□□□ 0.6
MRPS35-203ENST00000538315 CHMP7Q8WUX9 453 aaPredicted RBP18.82■□□□□ 0.6
MRPS35-203ENST00000538315 SYNJ2O15056 1496 aa18.81■□□□□ 0.6
MRPS35-203ENST00000538315 CUL7Q14999 1698 aa18.8■□□□□ 0.6
MRPS35-203ENST00000538315 FHAD1B1AJZ9 1412 aa18.79■□□□□ 0.6
MRPS35-203ENST00000538315 FAM9AQ8IZU1 332 aaPredicted RBP18.78■□□□□ 0.6
MRPS35-203ENST00000538315 EEA1Q15075 1411 aa18.77■□□□□ 0.6
MRPS35-203ENST00000538315 CARMIL1Q5VZK9 1371 aa18.75■□□□□ 0.59
MRPS35-203ENST00000538315 OSCARQ8IYS5 282 aa18.73■□□□□ 0.59
MRPS35-203ENST00000538315 GRIN2AQ12879 1464 aa18.73■□□□□ 0.59
MRPS35-203ENST00000538315 CSRNP3Q8WYN3 585 aa18.72■□□□□ 0.59
MRPS35-203ENST00000538315 RAPGEF2Q9Y4G8 1499 aa18.66■□□□□ 0.58
MRPS35-203ENST00000538315 PRXQ9BXM0 1461 aa18.64■□□□□ 0.57
MRPS35-203ENST00000538315 CEP170Q5SW79 1584 aa18.63■□□□□ 0.57
MRPS35-203ENST00000538315 NUP160Q12769 1436 aa18.6■□□□□ 0.57
MRPS35-203ENST00000538315 CLASP1Q7Z460 1538 aa18.58■□□□□ 0.56
MRPS35-203ENST00000538315 KIF21BO75037 1637 aa18.57■□□□□ 0.56
MRPS35-203ENST00000538315 EHMT2Q96KQ7 1210 aa18.56■□□□□ 0.56
MRPS35-203ENST00000538315 DNAJC5Q9H3Z4 198 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms