RNA–Protein interactions for RNA: ENST00000228306.8

RPLP0-201, Transcript of ribosomal protein lateral stalk subunit P0, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPLP0, Length 1,257 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPLP0-201ENST00000228306 NISCHQ9Y2I1 1504 aa49.2■■■■■ 5.47
RPLP0-201ENST00000228306 CCDC180Q9P1Z9 1646 aa43.57■■■■■ 4.57
RPLP0-201ENST00000228306 ABCC9O60706 1549 aa42.2■■■■■ 4.35
RPLP0-201ENST00000228306 ZCCHC6Q5VYS8 1495 aaKnown RBP41.08■■■■■ 4.17
RPLP0-201ENST00000228306 NACADO15069 1562 aa40.88■■■■■ 4.13
RPLP0-201ENST00000228306 MYO15BQ96JP2 1530 aa40.83■■■■■ 4.13
RPLP0-201ENST00000228306 DCAF8L2P0C7V8 631 aa40.8■■■■■ 4.12
RPLP0-201ENST00000228306 RB1CC1Q8TDY2 1594 aa40.8■■■■■ 4.12
RPLP0-201ENST00000228306 DCAF1Q9Y4B6 1507 aa40.78■■■■■ 4.12
RPLP0-201ENST00000228306 UNC13AQ9UPW8 1703 aa39.88■■■■□ 3.97
RPLP0-201ENST00000228306 SCRIBQ14160 1630 aa39.71■■■■□ 3.95
RPLP0-201ENST00000228306 BICRAQ9NZM4 1560 aa39.59■■■■□ 3.93
RPLP0-201ENST00000228306 PABPN1Q86U42 306 aaKnown RBP eCLIP39.49■■■■□ 3.91
RPLP0-201ENST00000228306 SHROOM4Q9ULL8 1493 aa39.24■■■■□ 3.87
RPLP0-201ENST00000228306 EIF4G1Q04637 1599 aaKnown RBP38.48■■■■□ 3.75
RPLP0-201ENST00000228306 DNAJC5BQ9UF47 199 aa38.45■■■■□ 3.75
RPLP0-201ENST00000228306 CECR2Q9BXF3 1484 aa38.27■■■■□ 3.72
RPLP0-201ENST00000228306 CC2D2AQ9P2K1 1620 aa38.23■■■■□ 3.71
RPLP0-201ENST00000228306 BAZ1AQ9NRL2 1556 aaPredicted RBP38.09■■■■□ 3.69
RPLP0-201ENST00000228306 SMARCA4P51532 1647 aa38.08■■■■□ 3.69
RPLP0-201ENST00000228306 MROH2BQ7Z745 1585 aa37.9■■■■□ 3.66
RPLP0-201ENST00000228306 ATAD2BQ9ULI0 1458 aa37.8■■■■□ 3.64
RPLP0-201ENST00000228306 PEG3Q9GZU2 1588 aa37.76■■■■□ 3.64
RPLP0-201ENST00000228306 NCAPD3P42695 1498 aa37.75■■■■□ 3.63
RPLP0-201ENST00000228306 SMARCA2P51531 1590 aa37.75■■■■□ 3.63
RPLP0-201ENST00000228306 RSF1Q96T23 1441 aaPredicted RBP37.62■■■■□ 3.61
RPLP0-201ENST00000228306 HMGXB3Q12766 1538 aa37.57■■■■□ 3.61
RPLP0-201ENST00000228306 WIZO95785 1651 aa37.49■■■■□ 3.59
RPLP0-201ENST00000228306 BAZ1BQ9UIG0 1483 aaKnown RBP37.45■■■■□ 3.59
RPLP0-201ENST00000228306 TOP2AP11388 1531 aaKnown RBP37.15■■■■□ 3.54
RPLP0-201ENST00000228306 SUPT5HO00267 1087 aaKnown RBP36.84■■■■□ 3.49
RPLP0-201ENST00000228306 CCDC88BA6NC98 1476 aa36.7■■■■□ 3.47
RPLP0-201ENST00000228306 NESP48681 1621 aa36.65■■■■□ 3.46
RPLP0-201ENST00000228306 LAMC3Q9Y6N6 1575 aa36.65■■■■□ 3.46
RPLP0-201ENST00000228306 CADPSQ9ULU8 1353 aa36.64■■■■□ 3.46
RPLP0-201ENST00000228306 CFTRP13569 1480 aa36.52■■■■□ 3.44
RPLP0-201ENST00000228306 PDS5BQ9NTI5 1447 aa36.38■■■■□ 3.41
RPLP0-201ENST00000228306 ERCC6Q03468 1493 aa36.31■■■■□ 3.4
RPLP0-201ENST00000228306 PRDM2Q13029 1718 aa36.22■■■■□ 3.39
RPLP0-201ENST00000228306 KIF21AQ7Z4S6 1674 aa36.22■■■■□ 3.39
RPLP0-201ENST00000228306 FANCD2Q9BXW9 1451 aa36.18■■■■□ 3.38
RPLP0-201ENST00000228306 CEP164Q9UPV0 1460 aa36.09■■■■□ 3.37
RPLP0-201ENST00000228306 THOC2Q8NI27 1593 aaKnown RBP36.05■■■■□ 3.36
RPLP0-201ENST00000228306 MRC2Q9UBG0 1479 aa35.98■■■■□ 3.35
RPLP0-201ENST00000228306 CUX2O14529 1486 aa35.88■■■■□ 3.33
RPLP0-201ENST00000228306 WDR62O43379 1518 aa35.88■■■■□ 3.33
RPLP0-201ENST00000228306 URB2Q14146 1524 aaKnown RBP35.81■■■■□ 3.32
RPLP0-201ENST00000228306 ABCC8Q09428 1581 aa35.7■■■■□ 3.31
RPLP0-201ENST00000228306 TOPBP1Q92547 1522 aa35.66■■■■□ 3.3
RPLP0-201ENST00000228306 DNMBPQ6XZF7 1577 aa35.64■■■■□ 3.3
RPLP0-201ENST00000228306 CUX1P39880 1505 aa35.53■■■■□ 3.28
RPLP0-201ENST00000228306 WRNQ14191 1432 aaPredicted RBP eCLIP35.43■■■■□ 3.26
RPLP0-201ENST00000228306 POLA1P09884 1462 aaPredicted RBP35.39■■■■□ 3.26
RPLP0-201ENST00000228306 IFT140Q96RY7 1462 aa35.35■■■■□ 3.25
RPLP0-201ENST00000228306 TOP2BQ02880 1626 aa35.34■■■■□ 3.25
RPLP0-201ENST00000228306 FGD5Q6ZNL6 1462 aa35.34■■■■□ 3.25
RPLP0-201ENST00000228306 BIVM-ERCC5R4GMW8 1640 aa35.33■■■■□ 3.25
RPLP0-201ENST00000228306 SYNJ1O43426 1573 aa35.33■■■■□ 3.25
RPLP0-201ENST00000228306 TARBP1Q13395 1621 aaKnown RBP35.26■■■■□ 3.24
RPLP0-201ENST00000228306 SOGA1O94964 1423 aa35.23■■■■□ 3.23
RPLP0-201ENST00000228306 RAD54L2Q9Y4B4 1467 aa35.21■■■■□ 3.23
RPLP0-201ENST00000228306 ZNF608Q9ULD9 1512 aaPredicted RBP35.14■■■■□ 3.22
RPLP0-201ENST00000228306 WDR97A6NE52 1622 aa35.06■■■■□ 3.2
RPLP0-201ENST00000228306 ABCA10Q8WWZ4 1543 aa35.06■■■■□ 3.2
RPLP0-201ENST00000228306 EIF4G3O43432 1585 aaKnown RBP35■■■■□ 3.19
RPLP0-201ENST00000228306 AQRO60306 1485 aaKnown RBP eCLIP34.98■■■■□ 3.192e-7■■■■■ 80.8
RPLP0-201ENST00000228306 TDRD9Q8NDG6 1382 aaKnown RBP34.97■■■■□ 3.19
RPLP0-201ENST00000228306 ABCA5Q8WWZ7 1642 aa34.87■■■■□ 3.17
RPLP0-201ENST00000228306 GAPVD1Q14C86 1478 aa34.84■■■■□ 3.17
RPLP0-201ENST00000228306 TRIM41Q8WV44 630 aa34.81■■■■□ 3.16
RPLP0-201ENST00000228306 GRIN2BQ13224 1484 aa34.78■■■■□ 3.16
RPLP0-201ENST00000228306 PBRM1Q86U86 1689 aa34.71■■■■□ 3.15
RPLP0-201ENST00000228306 CHIC1Q5VXU3 224 aa34.68■■■■□ 3.14
RPLP0-201ENST00000228306 SNAPC4Q5SXM2 1469 aa34.66■■■■□ 3.14
RPLP0-201ENST00000228306 MAGI1Q96QZ7 1491 aaPredicted RBP34.66■■■■□ 3.14
RPLP0-201ENST00000228306 KIF27Q86VH2 1401 aa34.66■■■■□ 3.14
RPLP0-201ENST00000228306 ERICH3Q5RHP9 1530 aa34.64■■■■□ 3.14
RPLP0-201ENST00000228306 SYNJ2O15056 1496 aa34.52■■■■□ 3.12
RPLP0-201ENST00000228306 IGF1RP08069 1367 aa34.51■■■■□ 3.12
RPLP0-201ENST00000228306 ADAMTS12P58397 1594 aa34.49■■■■□ 3.11
RPLP0-201ENST00000228306 CHD1O14646 1710 aa34.47■■■■□ 3.11
RPLP0-201ENST00000228306 RUSC2Q8N2Y8 1516 aa34.47■■■■□ 3.11
RPLP0-201ENST00000228306 FHAD1B1AJZ9 1412 aa34.47■■■■□ 3.11
RPLP0-201ENST00000228306 OSCARQ8IYS5 282 aa34.44■■■■□ 3.1
RPLP0-201ENST00000228306 CHMP7Q8WUX9 453 aaPredicted RBP34.43■■■■□ 3.1
RPLP0-201ENST00000228306 FBLN2P98095 1184 aa34.4■■■■□ 3.1
RPLP0-201ENST00000228306 CUL7Q14999 1698 aa34.37■■■■□ 3.09
RPLP0-201ENST00000228306 DNAJC5Q9H3Z4 198 aa34.34■■■■□ 3.09
RPLP0-201ENST00000228306 GRIN2AQ12879 1464 aa34.33■■■■□ 3.09
RPLP0-201ENST00000228306 CARMIL1Q5VZK9 1371 aa34.29■■■■□ 3.08
RPLP0-201ENST00000228306 EEA1Q15075 1411 aa34.28■■■■□ 3.08
RPLP0-201ENST00000228306 NUP160Q12769 1436 aa34.21■■■■□ 3.07
RPLP0-201ENST00000228306 CLASP1Q7Z460 1538 aa34.17■■■■□ 3.06
RPLP0-201ENST00000228306 CSRNP3Q8WYN3 585 aa34.16■■■■□ 3.06
RPLP0-201ENST00000228306 CEP170Q5SW79 1584 aa34.15■■■■□ 3.06
RPLP0-201ENST00000228306 PRXQ9BXM0 1461 aa34.14■■■■□ 3.06
RPLP0-201ENST00000228306 RAPGEF2Q9Y4G8 1499 aa34.13■■■■□ 3.05
RPLP0-201ENST00000228306 FAM9AQ8IZU1 332 aaPredicted RBP34.02■■■■□ 3.04
RPLP0-201ENST00000228306 KIAA0586Q9BVV6 1533 aa33.96■■■■□ 3.03
RPLP0-201ENST00000228306 SHROOM2Q13796 1616 aa33.9■■■■□ 3.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms