RNA–Protein interactions for RNA: ENST00000566229.1

CYBA-206, Transcript of cytochrome b-245 alpha chain, humanhuman

TSL 3

Gene CYBA, Length 405 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYBA-206ENST00000566229 NISCHQ9Y2I1 1504 aa33.84■■■■□ 3.01
CYBA-206ENST00000566229 CCDC180Q9P1Z9 1646 aa29.99■■■□□ 2.39
CYBA-206ENST00000566229 ABCC9O60706 1549 aa28.85■■■□□ 2.21
CYBA-206ENST00000566229 ZCCHC6Q5VYS8 1495 aaKnown RBP28.26■■■□□ 2.11
CYBA-206ENST00000566229 MYO15BQ96JP2 1530 aa28.2■■■□□ 2.1
CYBA-206ENST00000566229 DCAF1Q9Y4B6 1507 aa28.15■■■□□ 2.1
CYBA-206ENST00000566229 NACADO15069 1562 aa28.13■■■□□ 2.09
CYBA-206ENST00000566229 RB1CC1Q8TDY2 1594 aa28.03■■■□□ 2.08
CYBA-206ENST00000566229 DCAF8L2P0C7V8 631 aa27.88■■■□□ 2.05
CYBA-206ENST00000566229 UNC13AQ9UPW8 1703 aa27.36■■□□□ 1.97
CYBA-206ENST00000566229 SCRIBQ14160 1630 aa27.19■■□□□ 1.94
CYBA-206ENST00000566229 BICRAQ9NZM4 1560 aa27.18■■□□□ 1.94
CYBA-206ENST00000566229 SHROOM4Q9ULL8 1493 aa27.07■■□□□ 1.92
CYBA-206ENST00000566229 PABPN1Q86U42 306 aaKnown RBP eCLIP26.99■■□□□ 1.91
CYBA-206ENST00000566229 EIF4G1Q04637 1599 aaKnown RBP26.41■■□□□ 1.82
CYBA-206ENST00000566229 DNAJC5BQ9UF47 199 aa26.27■■□□□ 1.8
CYBA-206ENST00000566229 CECR2Q9BXF3 1484 aa26.25■■□□□ 1.79
CYBA-206ENST00000566229 BAZ1AQ9NRL2 1556 aaPredicted RBP26.2■■□□□ 1.79
CYBA-206ENST00000566229 CC2D2AQ9P2K1 1620 aa26.19■■□□□ 1.78
CYBA-206ENST00000566229 SMARCA4P51532 1647 aa26.16■■□□□ 1.78
CYBA-206ENST00000566229 MROH2BQ7Z745 1585 aa26.03■■□□□ 1.76
CYBA-206ENST00000566229 PEG3Q9GZU2 1588 aa26.03■■□□□ 1.76
CYBA-206ENST00000566229 NCAPD3P42695 1498 aa25.98■■□□□ 1.75
CYBA-206ENST00000566229 ATAD2BQ9ULI0 1458 aa25.97■■□□□ 1.75
CYBA-206ENST00000566229 SMARCA2P51531 1590 aa25.96■■□□□ 1.75
CYBA-206ENST00000566229 RSF1Q96T23 1441 aaPredicted RBP25.88■■□□□ 1.73
CYBA-206ENST00000566229 HMGXB3Q12766 1538 aa25.85■■□□□ 1.73
CYBA-206ENST00000566229 WIZO95785 1651 aa25.72■■□□□ 1.71
CYBA-206ENST00000566229 BAZ1BQ9UIG0 1483 aaKnown RBP25.71■■□□□ 1.71
CYBA-206ENST00000566229 TOP2AP11388 1531 aaKnown RBP25.53■■□□□ 1.68
CYBA-206ENST00000566229 SUPT5HO00267 1087 aaKnown RBP25.24■■□□□ 1.63
CYBA-206ENST00000566229 CCDC88BA6NC98 1476 aa25.22■■□□□ 1.63
CYBA-206ENST00000566229 LAMC3Q9Y6N6 1575 aa25.19■■□□□ 1.62
CYBA-206ENST00000566229 CADPSQ9ULU8 1353 aa25.18■■□□□ 1.62
CYBA-206ENST00000566229 CFTRP13569 1480 aa25.12■■□□□ 1.61
CYBA-206ENST00000566229 NESP48681 1621 aa25.08■■□□□ 1.6
CYBA-206ENST00000566229 PDS5BQ9NTI5 1447 aa25■■□□□ 1.59
CYBA-206ENST00000566229 PRDM2Q13029 1718 aa24.91■■□□□ 1.58
CYBA-206ENST00000566229 ERCC6Q03468 1493 aa24.84■■□□□ 1.57
CYBA-206ENST00000566229 FANCD2Q9BXW9 1451 aa24.83■■□□□ 1.56
CYBA-206ENST00000566229 KIF21AQ7Z4S6 1674 aa24.8■■□□□ 1.56
CYBA-206ENST00000566229 CEP164Q9UPV0 1460 aa24.77■■□□□ 1.56
CYBA-206ENST00000566229 THOC2Q8NI27 1593 aaKnown RBP24.71■■□□□ 1.55
CYBA-206ENST00000566229 MRC2Q9UBG0 1479 aa24.69■■□□□ 1.54
CYBA-206ENST00000566229 WDR62O43379 1518 aa24.64■■□□□ 1.53
CYBA-206ENST00000566229 CUX2O14529 1486 aa24.63■■□□□ 1.53
CYBA-206ENST00000566229 ABCC8Q09428 1581 aa24.6■■□□□ 1.53
CYBA-206ENST00000566229 URB2Q14146 1524 aaKnown RBP24.56■■□□□ 1.52
CYBA-206ENST00000566229 DNMBPQ6XZF7 1577 aa24.5■■□□□ 1.51
CYBA-206ENST00000566229 TOPBP1Q92547 1522 aa24.48■■□□□ 1.51
CYBA-206ENST00000566229 CUX1P39880 1505 aa24.4■■□□□ 1.5
CYBA-206ENST00000566229 WRNQ14191 1432 aaPredicted RBP eCLIP24.36■■□□□ 1.49
CYBA-206ENST00000566229 TOP2BQ02880 1626 aa24.32■■□□□ 1.48
CYBA-206ENST00000566229 BIVM-ERCC5R4GMW8 1640 aa24.31■■□□□ 1.48
CYBA-206ENST00000566229 POLA1P09884 1462 aaPredicted RBP24.29■■□□□ 1.48
CYBA-206ENST00000566229 IFT140Q96RY7 1462 aa24.28■■□□□ 1.48
CYBA-206ENST00000566229 SYNJ1O43426 1573 aa24.25■■□□□ 1.47
CYBA-206ENST00000566229 FGD5Q6ZNL6 1462 aa24.25■■□□□ 1.47
CYBA-206ENST00000566229 TARBP1Q13395 1621 aaKnown RBP24.23■■□□□ 1.47
CYBA-206ENST00000566229 SOGA1O94964 1423 aa24.19■■□□□ 1.46
CYBA-206ENST00000566229 WDR97A6NE52 1622 aa24.15■■□□□ 1.46
CYBA-206ENST00000566229 RAD54L2Q9Y4B4 1467 aa24.12■■□□□ 1.45
CYBA-206ENST00000566229 ABCA10Q8WWZ4 1543 aa24.11■■□□□ 1.45
CYBA-206ENST00000566229 ZNF608Q9ULD9 1512 aaPredicted RBP24.06■■□□□ 1.44
CYBA-206ENST00000566229 EIF4G3O43432 1585 aaKnown RBP23.99■■□□□ 1.43
CYBA-206ENST00000566229 AQRO60306 1485 aaKnown RBP eCLIP23.97■■□□□ 1.438e-7■■■■■ 38.1
CYBA-206ENST00000566229 TDRD9Q8NDG6 1382 aaKnown RBP23.96■■□□□ 1.43
CYBA-206ENST00000566229 ABCA5Q8WWZ7 1642 aa23.95■■□□□ 1.43
CYBA-206ENST00000566229 TRIM41Q8WV44 630 aa23.93■■□□□ 1.42
CYBA-206ENST00000566229 GAPVD1Q14C86 1478 aa23.93■■□□□ 1.42
CYBA-206ENST00000566229 GRIN2BQ13224 1484 aa23.9■■□□□ 1.42
CYBA-206ENST00000566229 CHIC1Q5VXU3 224 aa23.88■■□□□ 1.41
CYBA-206ENST00000566229 KIF27Q86VH2 1401 aa23.84■■□□□ 1.41
CYBA-206ENST00000566229 ERICH3Q5RHP9 1530 aa23.84■■□□□ 1.41
CYBA-206ENST00000566229 MAGI1Q96QZ7 1491 aaPredicted RBP23.83■■□□□ 1.41
CYBA-206ENST00000566229 PBRM1Q86U86 1689 aa23.81■■□□□ 1.4
CYBA-206ENST00000566229 SNAPC4Q5SXM2 1469 aa23.75■■□□□ 1.39
CYBA-206ENST00000566229 IGF1RP08069 1367 aa23.75■■□□□ 1.39
CYBA-206ENST00000566229 SYNJ2O15056 1496 aa23.71■■□□□ 1.39
CYBA-206ENST00000566229 FHAD1B1AJZ9 1412 aa23.69■■□□□ 1.38
CYBA-206ENST00000566229 ADAMTS12P58397 1594 aa23.67■■□□□ 1.38
CYBA-206ENST00000566229 EEA1Q15075 1411 aa23.67■■□□□ 1.38
CYBA-206ENST00000566229 RUSC2Q8N2Y8 1516 aa23.64■■□□□ 1.38
CYBA-206ENST00000566229 CUL7Q14999 1698 aa23.64■■□□□ 1.38
CYBA-206ENST00000566229 OSCARQ8IYS5 282 aa23.62■■□□□ 1.37
CYBA-206ENST00000566229 CHD1O14646 1710 aa23.61■■□□□ 1.37
CYBA-206ENST00000566229 CHMP7Q8WUX9 453 aaPredicted RBP23.6■■□□□ 1.37
CYBA-206ENST00000566229 GRIN2AQ12879 1464 aa23.57■■□□□ 1.36
CYBA-206ENST00000566229 CARMIL1Q5VZK9 1371 aa23.57■■□□□ 1.36
CYBA-206ENST00000566229 NUP160Q12769 1436 aa23.52■■□□□ 1.36
CYBA-206ENST00000566229 PRXQ9BXM0 1461 aa23.51■■□□□ 1.35
CYBA-206ENST00000566229 CSRNP3Q8WYN3 585 aa23.51■■□□□ 1.35
CYBA-206ENST00000566229 FBLN2P98095 1184 aa23.5■■□□□ 1.35
CYBA-206ENST00000566229 DNAJC5Q9H3Z4 198 aa23.5■■□□□ 1.35
CYBA-206ENST00000566229 RAPGEF2Q9Y4G8 1499 aa23.47■■□□□ 1.35
CYBA-206ENST00000566229 CLASP1Q7Z460 1538 aa23.46■■□□□ 1.35
CYBA-206ENST00000566229 CEP170Q5SW79 1584 aa23.41■■□□□ 1.34
CYBA-206ENST00000566229 KIAA0586Q9BVV6 1533 aa23.36■■□□□ 1.33
CYBA-206ENST00000566229 KIF21BO75037 1637 aa23.34■■□□□ 1.33
CYBA-206ENST00000566229 SHROOM2Q13796 1616 aa23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms