RNA–Protein interactions for RNA: ENST00000463032.5

LYRM4-204, Transcript of LYR motif containing 4, humanhuman

TSL 1 (best)

Gene LYRM4, Length 1,487 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM4-204ENST00000463032 NISCHQ9Y2I1 1504 aa31.9■■■□□ 2.7
LYRM4-204ENST00000463032 CCDC180Q9P1Z9 1646 aa28.13■■■□□ 2.09
LYRM4-204ENST00000463032 ABCC9O60706 1549 aa27.37■■□□□ 1.97
LYRM4-204ENST00000463032 DCAF8L2P0C7V8 631 aa26.73■■□□□ 1.87
LYRM4-204ENST00000463032 ZCCHC6Q5VYS8 1495 aaKnown RBP26.63■■□□□ 1.85
LYRM4-204ENST00000463032 NACADO15069 1562 aa26.42■■□□□ 1.82
LYRM4-204ENST00000463032 RB1CC1Q8TDY2 1594 aa26.39■■□□□ 1.81
LYRM4-204ENST00000463032 DCAF1Q9Y4B6 1507 aa26.34■■□□□ 1.81
LYRM4-204ENST00000463032 MYO15BQ96JP2 1530 aa26.31■■□□□ 1.8
LYRM4-204ENST00000463032 SCRIBQ14160 1630 aa25.81■■□□□ 1.72
LYRM4-204ENST00000463032 UNC13AQ9UPW8 1703 aa25.71■■□□□ 1.71
LYRM4-204ENST00000463032 PABPN1Q86U42 306 aaKnown RBP eCLIP25.69■■□□□ 1.7
LYRM4-204ENST00000463032 SHROOM4Q9ULL8 1493 aa25.57■■□□□ 1.68
LYRM4-204ENST00000463032 BICRAQ9NZM4 1560 aa25.56■■□□□ 1.68
LYRM4-204ENST00000463032 EIF4G1Q04637 1599 aaKnown RBP24.88■■□□□ 1.57
LYRM4-204ENST00000463032 CECR2Q9BXF3 1484 aa24.86■■□□□ 1.57
LYRM4-204ENST00000463032 DNAJC5BQ9UF47 199 aa24.83■■□□□ 1.56
LYRM4-204ENST00000463032 BAZ1AQ9NRL2 1556 aaPredicted RBP24.7■■□□□ 1.54
LYRM4-204ENST00000463032 CC2D2AQ9P2K1 1620 aa24.7■■□□□ 1.54
LYRM4-204ENST00000463032 SMARCA4P51532 1647 aa24.67■■□□□ 1.54
LYRM4-204ENST00000463032 MROH2BQ7Z745 1585 aa24.62■■□□□ 1.53
LYRM4-204ENST00000463032 ATAD2BQ9ULI0 1458 aa24.48■■□□□ 1.51
LYRM4-204ENST00000463032 RSF1Q96T23 1441 aaPredicted RBP24.46■■□□□ 1.51
LYRM4-204ENST00000463032 SMARCA2P51531 1590 aa24.44■■□□□ 1.5
LYRM4-204ENST00000463032 NCAPD3P42695 1498 aa24.39■■□□□ 1.49
LYRM4-204ENST00000463032 PEG3Q9GZU2 1588 aa24.37■■□□□ 1.49
LYRM4-204ENST00000463032 WIZO95785 1651 aa24.35■■□□□ 1.49
LYRM4-204ENST00000463032 BAZ1BQ9UIG0 1483 aaKnown RBP24.32■■□□□ 1.48
LYRM4-204ENST00000463032 HMGXB3Q12766 1538 aa24.28■■□□□ 1.48
LYRM4-204ENST00000463032 SUPT5HO00267 1087 aaKnown RBP24.25■■□□□ 1.47
LYRM4-204ENST00000463032 TOP2AP11388 1531 aaKnown RBP24.1■■□□□ 1.45
LYRM4-204ENST00000463032 CCDC88BA6NC98 1476 aa23.86■■□□□ 1.41
LYRM4-204ENST00000463032 NESP48681 1621 aa23.77■■□□□ 1.39
LYRM4-204ENST00000463032 CADPSQ9ULU8 1353 aa23.74■■□□□ 1.39
LYRM4-204ENST00000463032 LAMC3Q9Y6N6 1575 aa23.67■■□□□ 1.38
LYRM4-204ENST00000463032 CFTRP13569 1480 aa23.64■■□□□ 1.38
LYRM4-204ENST00000463032 ERCC6Q03468 1493 aa23.57■■□□□ 1.36
LYRM4-204ENST00000463032 PDS5BQ9NTI5 1447 aa23.57■■□□□ 1.36
LYRM4-204ENST00000463032 FANCD2Q9BXW9 1451 aa23.47■■□□□ 1.35
LYRM4-204ENST00000463032 KIF21AQ7Z4S6 1674 aa23.42■■□□□ 1.34
LYRM4-204ENST00000463032 CEP164Q9UPV0 1460 aa23.4■■□□□ 1.34
LYRM4-204ENST00000463032 PRDM2Q13029 1718 aa23.38■■□□□ 1.33
LYRM4-204ENST00000463032 MRC2Q9UBG0 1479 aa23.29■■□□□ 1.32
LYRM4-204ENST00000463032 THOC2Q8NI27 1593 aaKnown RBP23.25■■□□□ 1.31
LYRM4-204ENST00000463032 URB2Q14146 1524 aaKnown RBP23.2■■□□□ 1.3
LYRM4-204ENST00000463032 WDR62O43379 1518 aa23.16■■□□□ 1.3
LYRM4-204ENST00000463032 TOPBP1Q92547 1522 aa23.12■■□□□ 1.29
LYRM4-204ENST00000463032 CUX2O14529 1486 aa23.12■■□□□ 1.29
LYRM4-204ENST00000463032 ABCC8Q09428 1581 aa23.11■■□□□ 1.29
LYRM4-204ENST00000463032 DNMBPQ6XZF7 1577 aa23.1■■□□□ 1.29
LYRM4-204ENST00000463032 WRNQ14191 1432 aaPredicted RBP eCLIP23.07■■□□□ 1.28
LYRM4-204ENST00000463032 CUX1P39880 1505 aa23.06■■□□□ 1.28
LYRM4-204ENST00000463032 SYNJ1O43426 1573 aa22.97■■□□□ 1.27
LYRM4-204ENST00000463032 FGD5Q6ZNL6 1462 aa22.95■■□□□ 1.27
LYRM4-204ENST00000463032 POLA1P09884 1462 aaPredicted RBP22.95■■□□□ 1.26
LYRM4-204ENST00000463032 TOP2BQ02880 1626 aa22.93■■□□□ 1.26
LYRM4-204ENST00000463032 SOGA1O94964 1423 aa22.9■■□□□ 1.26
LYRM4-204ENST00000463032 BIVM-ERCC5R4GMW8 1640 aa22.89■■□□□ 1.25
LYRM4-204ENST00000463032 IFT140Q96RY7 1462 aa22.89■■□□□ 1.25
LYRM4-204ENST00000463032 RAD54L2Q9Y4B4 1467 aa22.89■■□□□ 1.25
LYRM4-204ENST00000463032 TRIM41Q8WV44 630 aa22.85■■□□□ 1.25
LYRM4-204ENST00000463032 TARBP1Q13395 1621 aaKnown RBP22.8■■□□□ 1.24
LYRM4-204ENST00000463032 ZNF608Q9ULD9 1512 aaPredicted RBP22.79■■□□□ 1.24
LYRM4-204ENST00000463032 TDRD9Q8NDG6 1382 aaKnown RBP22.76■■□□□ 1.23
LYRM4-204ENST00000463032 CHIC1Q5VXU3 224 aa22.75■■□□□ 1.23
LYRM4-204ENST00000463032 AQRO60306 1485 aaKnown RBP eCLIP22.72■■□□□ 1.23
LYRM4-204ENST00000463032 ABCA10Q8WWZ4 1543 aa22.71■■□□□ 1.23
LYRM4-204ENST00000463032 EIF4G3O43432 1585 aaKnown RBP22.67■■□□□ 1.22
LYRM4-204ENST00000463032 WDR97A6NE52 1622 aa22.65■■□□□ 1.22
LYRM4-204ENST00000463032 GAPVD1Q14C86 1478 aa22.62■■□□□ 1.21
LYRM4-204ENST00000463032 KIF27Q86VH2 1401 aa22.57■■□□□ 1.2
LYRM4-204ENST00000463032 GRIN2BQ13224 1484 aa22.57■■□□□ 1.2
LYRM4-204ENST00000463032 ABCA5Q8WWZ7 1642 aa22.56■■□□□ 1.2
LYRM4-204ENST00000463032 SNAPC4Q5SXM2 1469 aa22.5■■□□□ 1.19
LYRM4-204ENST00000463032 RUSC2Q8N2Y8 1516 aa22.48■■□□□ 1.19
LYRM4-204ENST00000463032 FBLN2P98095 1184 aa22.48■■□□□ 1.19
LYRM4-204ENST00000463032 PBRM1Q86U86 1689 aa22.48■■□□□ 1.19
LYRM4-204ENST00000463032 ERICH3Q5RHP9 1530 aa22.44■■□□□ 1.18
LYRM4-204ENST00000463032 MAGI1Q96QZ7 1491 aaPredicted RBP22.44■■□□□ 1.18
LYRM4-204ENST00000463032 IGF1RP08069 1367 aa22.44■■□□□ 1.18
LYRM4-204ENST00000463032 FAM9AQ8IZU1 332 aaPredicted RBP22.42■■□□□ 1.18
LYRM4-204ENST00000463032 CHMP7Q8WUX9 453 aaPredicted RBP22.42■■□□□ 1.18
LYRM4-204ENST00000463032 SYNJ2O15056 1496 aa22.37■■□□□ 1.17
LYRM4-204ENST00000463032 FHAD1B1AJZ9 1412 aa22.36■■□□□ 1.17
LYRM4-204ENST00000463032 ADAMTS12P58397 1594 aa22.34■■□□□ 1.17
LYRM4-204ENST00000463032 EEA1Q15075 1411 aa22.33■■□□□ 1.16
LYRM4-204ENST00000463032 CARMIL1Q5VZK9 1371 aa22.32■■□□□ 1.16
LYRM4-204ENST00000463032 CSRNP3Q8WYN3 585 aa22.32■■□□□ 1.16
LYRM4-204ENST00000463032 OSCARQ8IYS5 282 aa22.31■■□□□ 1.16
LYRM4-204ENST00000463032 CHD1O14646 1710 aa22.29■■□□□ 1.16
LYRM4-204ENST00000463032 CUL7Q14999 1698 aa22.29■■□□□ 1.16
LYRM4-204ENST00000463032 GRIN2AQ12879 1464 aa22.27■■□□□ 1.16
LYRM4-204ENST00000463032 RAPGEF2Q9Y4G8 1499 aa22.21■■□□□ 1.15
LYRM4-204ENST00000463032 PRXQ9BXM0 1461 aa22.18■■□□□ 1.14
LYRM4-204ENST00000463032 EHMT2Q96KQ7 1210 aa22.16■■□□□ 1.14
LYRM4-204ENST00000463032 NUP160Q12769 1436 aa22.13■■□□□ 1.13
LYRM4-204ENST00000463032 CEP170Q5SW79 1584 aa22.13■■□□□ 1.13
LYRM4-204ENST00000463032 DNAJC5Q9H3Z4 198 aa22.08■■□□□ 1.12
LYRM4-204ENST00000463032 CLASP1Q7Z460 1538 aa22.06■■□□□ 1.12
LYRM4-204ENST00000463032 KIF21BO75037 1637 aa22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms