RNA–Protein interactions for RNA: ENST00000482818.1

AP1B1-211, Transcript of adaptor related protein complex 1 subunit beta 1, humanhuman

TSL 1 (best)

Gene AP1B1, Length 3,560 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1B1-211ENST00000482818 NISCHQ9Y2I1 1504 aa22■■□□□ 1.11
AP1B1-211ENST00000482818 SUPT5HO00267 1087 aaKnown RBP20.51■□□□□ 0.87
AP1B1-211ENST00000482818 SHROOM4Q9ULL8 1493 aa20.41■□□□□ 0.86
AP1B1-211ENST00000482818 HRCP23327 699 aa20.31■□□□□ 0.84
AP1B1-211ENST00000482818 PELP1Q8IZL8 1130 aaKnown RBP20.24■□□□□ 0.83
AP1B1-211ENST00000482818 PCGF6Q9BYE7 350 aa20.22■□□□□ 0.83
AP1B1-211ENST00000482818 PPARGC1BQ86YN6 1023 aaKnown RBP20.01■□□□□ 0.79
AP1B1-211ENST00000482818 DCAF8L2P0C7V8 631 aa19.78■□□□□ 0.76
AP1B1-211ENST00000482818 CHIC1Q5VXU3 224 aa19.62■□□□□ 0.73
AP1B1-211ENST00000482818 MYT1Q01538 1121 aa19.58■□□□□ 0.72
AP1B1-211ENST00000482818 SCAF1Q9H7N4 1312 aaKnown RBP19.47■□□□□ 0.71
AP1B1-211ENST00000482818 LOC105371045A0A1W2PR82 267 aa19.43■□□□□ 0.7
AP1B1-211ENST00000482818 MYO15BQ96JP2 1530 aa19.34■□□□□ 0.69
AP1B1-211ENST00000482818 TRIM26Q12899 539 aaPredicted RBP19.31■□□□□ 0.68
AP1B1-211ENST00000482818 EHMT2Q96KQ7 1210 aa19.29■□□□□ 0.68
AP1B1-211ENST00000482818 ZEB1P37275 1124 aaPredicted RBP19.23■□□□□ 0.67
AP1B1-211ENST00000482818 FAM9AQ8IZU1 332 aaPredicted RBP19.11■□□□□ 0.65
AP1B1-211ENST00000482818 DCAF1Q9Y4B6 1507 aa18.93■□□□□ 0.62
AP1B1-211ENST00000482818 CENPBP07199 599 aaPredicted RBP18.9■□□□□ 0.62
AP1B1-211ENST00000482818 ACIN1Q9UKV3 1341 aaKnown RBP18.88■□□□□ 0.61
AP1B1-211ENST00000482818 CCER1Q8TC90 406 aaPredicted RBP18.86■□□□□ 0.61
AP1B1-211ENST00000482818 TRIM41Q8WV44 630 aa18.83■□□□□ 0.6
AP1B1-211ENST00000482818 NEUROD1Q13562 356 aa18.82■□□□□ 0.6
AP1B1-211ENST00000482818 GTF3C3Q9Y5Q9 886 aa18.81■□□□□ 0.6
AP1B1-211ENST00000482818 TTBK1Q5TCY1 1321 aaPredicted RBP18.78■□□□□ 0.6
AP1B1-211ENST00000482818 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.72■□□□□ 0.59
AP1B1-211ENST00000482818 YTHDC1Q96MU7 727 aaKnown RBP18.72■□□□□ 0.59
AP1B1-211ENST00000482818 CCDC180Q9P1Z9 1646 aa18.65■□□□□ 0.58
AP1B1-211ENST00000482818 DIEXFQ68CQ4 756 aaKnown RBP18.63■□□□□ 0.57
AP1B1-211ENST00000482818 ZCCHC6Q5VYS8 1495 aaKnown RBP18.58■□□□□ 0.56
AP1B1-211ENST00000482818 BCL11AQ9H165 835 aa18.32■□□□□ 0.52
AP1B1-211ENST00000482818 ZNF316A6NFI3 1004 aaPredicted RBP18.18■□□□□ 0.5
AP1B1-211ENST00000482818 HNRNPUL2Q1KMD3 747 aaKnown RBP18.09■□□□□ 0.49
AP1B1-211ENST00000482818 UBTFP17480 764 aaKnown RBP18.08■□□□□ 0.48
AP1B1-211ENST00000482818 MIER1Q8N108 512 aa18.05■□□□□ 0.48
AP1B1-211ENST00000482818 ANP32EQ9BTT0 268 aa18.04■□□□□ 0.48
AP1B1-211ENST00000482818 APLP2Q06481 763 aa17.97■□□□□ 0.47
AP1B1-211ENST00000482818 RANGAP1P46060 587 aaPredicted RBP17.96■□□□□ 0.47
AP1B1-211ENST00000482818 ABCC9O60706 1549 aa17.91■□□□□ 0.46
AP1B1-211ENST00000482818 CSRNP3Q8WYN3 585 aa17.88■□□□□ 0.45
AP1B1-211ENST00000482818 RSF1Q96T23 1441 aaPredicted RBP17.85■□□□□ 0.45
AP1B1-211ENST00000482818 PRKCSHP14314 528 aaPredicted RBP17.85■□□□□ 0.45
AP1B1-211ENST00000482818 BCANQ96GW7 911 aa17.84■□□□□ 0.45
AP1B1-211ENST00000482818 TSHZ2Q9NRE2 1034 aa17.77■□□□□ 0.43
AP1B1-211ENST00000482818 SUPT16HQ9Y5B9 1047 aaKnown RBP17.74■□□□□ 0.43
AP1B1-211ENST00000482818 RB1CC1Q8TDY2 1594 aa17.69■□□□□ 0.42
AP1B1-211ENST00000482818 NEFLP07196 543 aa17.69■□□□□ 0.42
AP1B1-211ENST00000482818 ERICH6Q7L0X2 663 aa17.66■□□□□ 0.42
AP1B1-211ENST00000482818 SCRIBQ14160 1630 aa17.66■□□□□ 0.42
AP1B1-211ENST00000482818 CLSPNQ9HAW4 1339 aa17.59■□□□□ 0.41
AP1B1-211ENST00000482818 CEP162Q5TB80 1403 aa17.58■□□□□ 0.41
AP1B1-211ENST00000482818 ITGAEP38570 1179 aa17.58■□□□□ 0.4
AP1B1-211ENST00000482818 FKBP8Q14318 412 aa17.54■□□□□ 0.4
AP1B1-211ENST00000482818 CECR2Q9BXF3 1484 aa17.4■□□□□ 0.38
AP1B1-211ENST00000482818 TNIKQ9UKE5 1360 aa17.38■□□□□ 0.37
AP1B1-211ENST00000482818 RBM19Q9Y4C8 960 aaKnown RBP17.34■□□□□ 0.37
AP1B1-211ENST00000482818 SOGA1O94964 1423 aa17.34■□□□□ 0.37
AP1B1-211ENST00000482818 DDX10Q13206 875 aaKnown RBP17.33■□□□□ 0.36
AP1B1-211ENST00000482818 WRNQ14191 1432 aaPredicted RBP eCLIP17.33■□□□□ 0.36
AP1B1-211ENST00000482818 TRIM52Q96A61 297 aa17.33■□□□□ 0.36
AP1B1-211ENST00000482818 KCNH8Q96L42 1107 aa17.3■□□□□ 0.36
AP1B1-211ENST00000482818 CCDC88BA6NC98 1476 aa17.29■□□□□ 0.36
AP1B1-211ENST00000482818 MROH2BQ7Z745 1585 aa17.27■□□□□ 0.35
AP1B1-211ENST00000482818 ABCC8Q09428 1581 aa17.26■□□□□ 0.35
AP1B1-211ENST00000482818 PABPN1Q86U42 306 aaKnown RBP eCLIP17.25■□□□□ 0.35
AP1B1-211ENST00000482818 CLIP1P30622 1438 aa17.23■□□□□ 0.35
AP1B1-211ENST00000482818 CDK11AQ9UQ88 783 aaPredicted RBP17.22■□□□□ 0.35
AP1B1-211ENST00000482818 ATP1B4Q9UN42 357 aaPredicted RBP17.22■□□□□ 0.35
AP1B1-211ENST00000482818 HIRIP3Q9BW71 556 aaPredicted RBP17.21■□□□□ 0.35
AP1B1-211ENST00000482818 ANP32CO43423 234 aa17.2■□□□□ 0.34
AP1B1-211ENST00000482818 GOLGA3Q08378 1498 aa17.2■□□□□ 0.34
AP1B1-211ENST00000482818 IRX6P78412 446 aaPredicted RBP17.19■□□□□ 0.34
AP1B1-211ENST00000482818 MSH5O43196 834 aa17.18■□□□□ 0.34
AP1B1-211ENST00000482818 ANO8Q9HCE9 1232 aaPredicted RBP17.18■□□□□ 0.34
AP1B1-211ENST00000482818 WIZO95785 1651 aa17.16■□□□□ 0.34
AP1B1-211ENST00000482818 RUSC2Q8N2Y8 1516 aa17.14■□□□□ 0.33
AP1B1-211ENST00000482818 EEA1Q15075 1411 aa17.12■□□□□ 0.33
AP1B1-211ENST00000482818 DEKP35659 375 aaKnown RBP17.09■□□□□ 0.33
AP1B1-211ENST00000482818 FAM50AQ14320 339 aaKnown RBP17.09■□□□□ 0.33
AP1B1-211ENST00000482818 HNRNPUQ00839 825 aaKnown RBP eCLIP17.06■□□□□ 0.32
AP1B1-211ENST00000482818 DHX57Q6P158 1386 aaKnown RBP17.05■□□□□ 0.32
AP1B1-211ENST00000482818 NBR1Q14596 966 aa17.04■□□□□ 0.32
AP1B1-211ENST00000482818 VPS8Q8N3P4 1428 aa17.02■□□□□ 0.31
AP1B1-211ENST00000482818 MYT1LQ9UL68 1186 aa17.02■□□□□ 0.31
AP1B1-211ENST00000482818 CNGB1Q14028 1251 aaPredicted RBP17.01■□□□□ 0.31
AP1B1-211ENST00000482818 SIN3AQ96ST3 1273 aa16.99■□□□□ 0.31
AP1B1-211ENST00000482818 CEP164Q9UPV0 1460 aa16.99■□□□□ 0.31
AP1B1-211ENST00000482818 KANK4Q5T7N3 995 aaPredicted RBP16.99■□□□□ 0.31
AP1B1-211ENST00000482818 RTL5Q5HYW3 569 aaPredicted RBP16.98■□□□□ 0.31
AP1B1-211ENST00000482818 SALL2Q9Y467 1007 aaPredicted RBP16.95■□□□□ 0.3
AP1B1-211ENST00000482818 FANCIQ9NVI1 1328 aa16.95■□□□□ 0.3
AP1B1-211ENST00000482818 CCDC136Q96JN2 1154 aa16.94■□□□□ 0.3
AP1B1-211ENST00000482818 BAZ1AQ9NRL2 1556 aaPredicted RBP16.88■□□□□ 0.29
AP1B1-211ENST00000482818 NACADO15069 1562 aa16.87■□□□□ 0.29
AP1B1-211ENST00000482818 FAM9BQ8IZU0 186 aa16.83■□□□□ 0.29
AP1B1-211ENST00000482818 CCNB3Q8WWL7 1395 aa16.82■□□□□ 0.28
AP1B1-211ENST00000482818 B4GALNT3Q6L9W6 998 aa16.82■□□□□ 0.28
AP1B1-211ENST00000482818 POLR3GLQ9BT43 218 aa16.82■□□□□ 0.28
AP1B1-211ENST00000482818 CCER2I3L3R5 266 aa16.81■□□□□ 0.28
AP1B1-211ENST00000482818 RAPGEF2Q9Y4G8 1499 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms