RNA–Protein interactions for RNA: ENST00000335997.11

ELF4-202, Transcript of E74 like ETS transcription factor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ELF4, Length 4,145 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ELF4-202ENST00000335997 NISCHQ9Y2I1 1504 aa18.19■□□□□ 0.5
ELF4-202ENST00000335997 CCDC180Q9P1Z9 1646 aa15.69■□□□□ 0.1
ELF4-202ENST00000335997 DCAF8L2P0C7V8 631 aa15.48■□□□□ 0.07
ELF4-202ENST00000335997 SHROOM4Q9ULL8 1493 aa15.36■□□□□ 0.05
ELF4-202ENST00000335997 ZCCHC6Q5VYS8 1495 aaKnown RBP15.28■□□□□ 0.04
ELF4-202ENST00000335997 SUPT5HO00267 1087 aaKnown RBP15.03■□□□□ -0
ELF4-202ENST00000335997 DCAF1Q9Y4B6 1507 aa14.94□□□□□ -0.02
ELF4-202ENST00000335997 ABCC9O60706 1549 aa14.91□□□□□ -0.02
ELF4-202ENST00000335997 MYO15BQ96JP2 1530 aa14.67□□□□□ -0.06
ELF4-202ENST00000335997 NACADO15069 1562 aa14.58□□□□□ -0.08
ELF4-202ENST00000335997 SCRIBQ14160 1630 aa14.55□□□□□ -0.08
ELF4-202ENST00000335997 RB1CC1Q8TDY2 1594 aa14.49□□□□□ -0.09
ELF4-202ENST00000335997 UNC13AQ9UPW8 1703 aa14.48□□□□□ -0.09
ELF4-202ENST00000335997 CHIC1Q5VXU3 224 aa14.37□□□□□ -0.11
ELF4-202ENST00000335997 BICRAQ9NZM4 1560 aa14.28□□□□□ -0.12
ELF4-202ENST00000335997 RSF1Q96T23 1441 aaPredicted RBP14.28□□□□□ -0.12
ELF4-202ENST00000335997 CECR2Q9BXF3 1484 aa14.15□□□□□ -0.14
ELF4-202ENST00000335997 PABPN1Q86U42 306 aaKnown RBP eCLIP14.13□□□□□ -0.15
ELF4-202ENST00000335997 TRIM41Q8WV44 630 aa14.09□□□□□ -0.15
ELF4-202ENST00000335997 MROH2BQ7Z745 1585 aa14.07□□□□□ -0.16
ELF4-202ENST00000335997 BAZ1AQ9NRL2 1556 aaPredicted RBP14.05□□□□□ -0.16
ELF4-202ENST00000335997 WIZO95785 1651 aa13.92□□□□□ -0.18
ELF4-202ENST00000335997 FAM9AQ8IZU1 332 aaPredicted RBP13.91□□□□□ -0.18
ELF4-202ENST00000335997 LOC105371045A0A1W2PR82 267 aa13.9□□□□□ -0.18
ELF4-202ENST00000335997 SMARCA4P51532 1647 aa13.87□□□□□ -0.19
ELF4-202ENST00000335997 TOP2AP11388 1531 aaKnown RBP13.81□□□□□ -0.2
ELF4-202ENST00000335997 EHMT2Q96KQ7 1210 aa13.78□□□□□ -0.2
ELF4-202ENST00000335997 CCDC88BA6NC98 1476 aa13.75□□□□□ -0.21
ELF4-202ENST00000335997 EIF4G1Q04637 1599 aaKnown RBP13.74□□□□□ -0.21
ELF4-202ENST00000335997 BAZ1BQ9UIG0 1483 aaKnown RBP13.68□□□□□ -0.22
ELF4-202ENST00000335997 PCGF6Q9BYE7 350 aa13.68□□□□□ -0.22
ELF4-202ENST00000335997 SMARCA2P51531 1590 aa13.67□□□□□ -0.22
ELF4-202ENST00000335997 PEG3Q9GZU2 1588 aa13.67□□□□□ -0.22
ELF4-202ENST00000335997 ATAD2BQ9ULI0 1458 aa13.66□□□□□ -0.22
ELF4-202ENST00000335997 CC2D2AQ9P2K1 1620 aa13.61□□□□□ -0.23
ELF4-202ENST00000335997 TRIM26Q12899 539 aaPredicted RBP13.54□□□□□ -0.24
ELF4-202ENST00000335997 DNAJC5BQ9UF47 199 aa13.54□□□□□ -0.24
ELF4-202ENST00000335997 ABCC8Q09428 1581 aa13.54□□□□□ -0.24
ELF4-202ENST00000335997 WRNQ14191 1432 aaPredicted RBP eCLIP13.52□□□□□ -0.24
ELF4-202ENST00000335997 UBTFP17480 764 aaKnown RBP13.52□□□□□ -0.25
ELF4-202ENST00000335997 CSRNP3Q8WYN3 585 aa13.51□□□□□ -0.25
ELF4-202ENST00000335997 NCAPD3P42695 1498 aa13.48□□□□□ -0.25
ELF4-202ENST00000335997 EEA1Q15075 1411 aa13.48□□□□□ -0.25
ELF4-202ENST00000335997 HMGXB3Q12766 1538 aa13.46□□□□□ -0.25
ELF4-202ENST00000335997 HRCP23327 699 aa13.41□□□□□ -0.26
ELF4-202ENST00000335997 SOGA1O94964 1423 aa13.41□□□□□ -0.26
ELF4-202ENST00000335997 PPARGC1BQ86YN6 1023 aaKnown RBP13.33□□□□□ -0.28
ELF4-202ENST00000335997 TNIKQ9UKE5 1360 aa13.33□□□□□ -0.28
ELF4-202ENST00000335997 GOLGA3Q08378 1498 aa13.31□□□□□ -0.28
ELF4-202ENST00000335997 APLP2Q06481 763 aa13.3□□□□□ -0.28
ELF4-202ENST00000335997 RUSC2Q8N2Y8 1516 aa13.29□□□□□ -0.28
ELF4-202ENST00000335997 CEP162Q5TB80 1403 aa13.28□□□□□ -0.28
ELF4-202ENST00000335997 CEP164Q9UPV0 1460 aa13.28□□□□□ -0.28
ELF4-202ENST00000335997 RANGAP1P46060 587 aaPredicted RBP13.28□□□□□ -0.28
ELF4-202ENST00000335997 SYNJ1O43426 1573 aa13.27□□□□□ -0.28
ELF4-202ENST00000335997 CADPSQ9ULU8 1353 aa13.26□□□□□ -0.29
ELF4-202ENST00000335997 CFTRP13569 1480 aa13.26□□□□□ -0.29
ELF4-202ENST00000335997 TTBK1Q5TCY1 1321 aaPredicted RBP13.26□□□□□ -0.29
ELF4-202ENST00000335997 ZEB1P37275 1124 aaPredicted RBP13.25□□□□□ -0.29
ELF4-202ENST00000335997 TOP2BQ02880 1626 aa13.2□□□□□ -0.3
ELF4-202ENST00000335997 KIF27Q86VH2 1401 aa13.2□□□□□ -0.3
ELF4-202ENST00000335997 CLIP1P30622 1438 aa13.17□□□□□ -0.3
ELF4-202ENST00000335997 PRDM2Q13029 1718 aa13.15□□□□□ -0.31
ELF4-202ENST00000335997 CUX1P39880 1505 aa13.12□□□□□ -0.31
ELF4-202ENST00000335997 KIF21BO75037 1637 aa13.12□□□□□ -0.31
ELF4-202ENST00000335997 NESP48681 1621 aa13.11□□□□□ -0.31
ELF4-202ENST00000335997 RAPGEF2Q9Y4G8 1499 aa13.11□□□□□ -0.31
ELF4-202ENST00000335997 BIVM-ERCC5R4GMW8 1640 aa13.1□□□□□ -0.31
ELF4-202ENST00000335997 FANCD2Q9BXW9 1451 aa13.09□□□□□ -0.31
ELF4-202ENST00000335997 CCER1Q8TC90 406 aaPredicted RBP13.09□□□□□ -0.31
ELF4-202ENST00000335997 CUX2O14529 1486 aa13.08□□□□□ -0.32
ELF4-202ENST00000335997 LAMC3Q9Y6N6 1575 aa13.05□□□□□ -0.32
ELF4-202ENST00000335997 KIF21AQ7Z4S6 1674 aa13.03□□□□□ -0.32
ELF4-202ENST00000335997 PDS5BQ9NTI5 1447 aa13.02□□□□□ -0.32
ELF4-202ENST00000335997 VPS8Q8N3P4 1428 aa13.02□□□□□ -0.33
ELF4-202ENST00000335997 PRXQ9BXM0 1461 aa13.02□□□□□ -0.33
ELF4-202ENST00000335997 FGD5Q6ZNL6 1462 aa13.02□□□□□ -0.33
ELF4-202ENST00000335997 ERICH3Q5RHP9 1530 aa13.01□□□□□ -0.33
ELF4-202ENST00000335997 CARMIL1Q5VZK9 1371 aa13.01□□□□□ -0.33
ELF4-202ENST00000335997 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.99□□□□□ -0.33
ELF4-202ENST00000335997 IGF1RP08069 1367 aa12.98□□□□□ -0.33
ELF4-202ENST00000335997 HNRNPUL2Q1KMD3 747 aaKnown RBP12.96□□□□□ -0.34
ELF4-202ENST00000335997 ATP1B4Q9UN42 357 aaPredicted RBP12.95□□□□□ -0.34
ELF4-202ENST00000335997 DNMBPQ6XZF7 1577 aa12.93□□□□□ -0.34
ELF4-202ENST00000335997 THOC2Q8NI27 1593 aaKnown RBP12.92□□□□□ -0.34
ELF4-202ENST00000335997 TOPBP1Q92547 1522 aa12.92□□□□□ -0.34
ELF4-202ENST00000335997 RAD54L2Q9Y4B4 1467 aa12.9□□□□□ -0.34
ELF4-202ENST00000335997 POLA1P09884 1462 aaPredicted RBP12.89□□□□□ -0.35
ELF4-202ENST00000335997 P3H3Q8IVL6 736 aa12.88□□□□□ -0.35
ELF4-202ENST00000335997 TDRD9Q8NDG6 1382 aaKnown RBP12.86□□□□□ -0.35
ELF4-202ENST00000335997 URB2Q14146 1524 aaKnown RBP12.86□□□□□ -0.35
ELF4-202ENST00000335997 ABCA10Q8WWZ4 1543 aa12.86□□□□□ -0.35
ELF4-202ENST00000335997 ARAP1Q96P48 1450 aa12.82□□□□□ -0.36
ELF4-202ENST00000335997 WDR62O43379 1518 aa12.82□□□□□ -0.36
ELF4-202ENST00000335997 FHAD1B1AJZ9 1412 aa12.8□□□□□ -0.36
ELF4-202ENST00000335997 ARHGAP35Q9NRY4 1499 aa12.8□□□□□ -0.36
ELF4-202ENST00000335997 KANK4Q5T7N3 995 aaPredicted RBP12.79□□□□□ -0.36
ELF4-202ENST00000335997 GAPVD1Q14C86 1478 aa12.79□□□□□ -0.36
ELF4-202ENST00000335997 ITGAEP38570 1179 aa12.77□□□□□ -0.36
ELF4-202ENST00000335997 WDR97A6NE52 1622 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms