RNA–Protein interactions for RNA: ENST00000366767.7

CDC42BPA-204, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 9,320 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-204ENST00000366767 NISCHQ9Y2I1 1504 aa10.11□□□□□ -0.79
CDC42BPA-204ENST00000366767 DCAF8L2P0C7V8 631 aa8.99□□□□□ -0.97
CDC42BPA-204ENST00000366767 SUPT5HO00267 1087 aaKnown RBP8.88□□□□□ -0.99
CDC42BPA-204ENST00000366767 SHROOM4Q9ULL8 1493 aa8.84□□□□□ -0.99
CDC42BPA-204ENST00000366767 MYT1Q01538 1121 aa8.63□□□□□ -1.03
CDC42BPA-204ENST00000366767 PELP1Q8IZL8 1130 aaKnown RBP8.6□□□□□ -1.03
CDC42BPA-204ENST00000366767 CCDC180Q9P1Z9 1646 aa8.52□□□□□ -1.05
CDC42BPA-204ENST00000366767 ZCCHC6Q5VYS8 1495 aaKnown RBP8.49□□□□□ -1.05
CDC42BPA-204ENST00000366767 CHIC1Q5VXU3 224 aa8.4□□□□□ -1.06
CDC42BPA-204ENST00000366767 ZEB1P37275 1124 aaPredicted RBP8.38□□□□□ -1.07
CDC42BPA-204ENST00000366767 TRIM41Q8WV44 630 aa8.36□□□□□ -1.07
CDC42BPA-204ENST00000366767 PCGF6Q9BYE7 350 aa8.34□□□□□ -1.07
CDC42BPA-204ENST00000366767 DCAF1Q9Y4B6 1507 aa8.29□□□□□ -1.08
CDC42BPA-204ENST00000366767 ERICH6Q7L0X2 663 aa8.28□□□□□ -1.08
CDC42BPA-204ENST00000366767 HRCP23327 699 aa8.28□□□□□ -1.08
CDC42BPA-204ENST00000366767 TRIM26Q12899 539 aaPredicted RBP8.27□□□□□ -1.08
CDC42BPA-204ENST00000366767 FAM9AQ8IZU1 332 aaPredicted RBP8.23□□□□□ -1.09
CDC42BPA-204ENST00000366767 CENPBP07199 599 aaPredicted RBP8.2□□□□□ -1.1
CDC42BPA-204ENST00000366767 APLP2Q06481 763 aa8.18□□□□□ -1.1
CDC42BPA-204ENST00000366767 CCER1Q8TC90 406 aaPredicted RBP8.16□□□□□ -1.1
CDC42BPA-204ENST00000366767 EHMT2Q96KQ7 1210 aa8.14□□□□□ -1.11
CDC42BPA-204ENST00000366767 LOC105371045A0A1W2PR82 267 aa8.14□□□□□ -1.11
CDC42BPA-204ENST00000366767 ABCC9O60706 1549 aa8.1□□□□□ -1.11
CDC42BPA-204ENST00000366767 MYO15BQ96JP2 1530 aa8.06□□□□□ -1.12
CDC42BPA-204ENST00000366767 UBTFP17480 764 aaKnown RBP8.06□□□□□ -1.12
CDC42BPA-204ENST00000366767 NACADO15069 1562 aa8.05□□□□□ -1.12
CDC42BPA-204ENST00000366767 SCRIBQ14160 1630 aa8.05□□□□□ -1.12
CDC42BPA-204ENST00000366767 TTBK1Q5TCY1 1321 aaPredicted RBP8.04□□□□□ -1.12
CDC42BPA-204ENST00000366767 RSF1Q96T23 1441 aaPredicted RBP8.02□□□□□ -1.13
CDC42BPA-204ENST00000366767 RB1CC1Q8TDY2 1594 aa7.97□□□□□ -1.13
CDC42BPA-204ENST00000366767 CSRNP3Q8WYN3 585 aa7.9□□□□□ -1.15
CDC42BPA-204ENST00000366767 PPARGC1BQ86YN6 1023 aaKnown RBP7.89□□□□□ -1.15
CDC42BPA-204ENST00000366767 NEFLP07196 543 aa7.89□□□□□ -1.15
CDC42BPA-204ENST00000366767 YTHDC1Q96MU7 727 aaKnown RBP7.89□□□□□ -1.15
CDC42BPA-204ENST00000366767 EEA1Q15075 1411 aa7.89□□□□□ -1.15
CDC42BPA-204ENST00000366767 BAZ1AQ9NRL2 1556 aaPredicted RBP7.88□□□□□ -1.15
CDC42BPA-204ENST00000366767 PABPN1Q86U42 306 aaKnown RBP eCLIP7.84□□□□□ -1.15
CDC42BPA-204ENST00000366767 RANGAP1P46060 587 aaPredicted RBP7.82□□□□□ -1.16
CDC42BPA-204ENST00000366767 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.8□□□□□ -1.16
CDC42BPA-204ENST00000366767 DIEXFQ68CQ4 756 aaKnown RBP7.79□□□□□ -1.16
CDC42BPA-204ENST00000366767 CECR2Q9BXF3 1484 aa7.78□□□□□ -1.16
CDC42BPA-204ENST00000366767 MROH2BQ7Z745 1585 aa7.77□□□□□ -1.17
CDC42BPA-204ENST00000366767 TNIKQ9UKE5 1360 aa7.77□□□□□ -1.17
CDC42BPA-204ENST00000366767 HNRNPUL2Q1KMD3 747 aaKnown RBP7.77□□□□□ -1.17
CDC42BPA-204ENST00000366767 GOLGA3Q08378 1498 aa7.76□□□□□ -1.17
CDC42BPA-204ENST00000366767 ATP1B4Q9UN42 357 aaPredicted RBP7.75□□□□□ -1.17
CDC42BPA-204ENST00000366767 ZNF316A6NFI3 1004 aaPredicted RBP7.75□□□□□ -1.17
CDC42BPA-204ENST00000366767 WRNQ14191 1432 aaPredicted RBP eCLIP7.72□□□□□ -1.17
CDC42BPA-204ENST00000366767 TOP2AP11388 1531 aaKnown RBP7.72□□□□□ -1.17
CDC42BPA-204ENST00000366767 CEP162Q5TB80 1403 aa7.71□□□□□ -1.18
CDC42BPA-204ENST00000366767 RTL5Q5HYW3 569 aaPredicted RBP7.71□□□□□ -1.18
CDC42BPA-204ENST00000366767 CEP164Q9UPV0 1460 aa7.71□□□□□ -1.18
CDC42BPA-204ENST00000366767 DAXXQ9UER7 740 aaPredicted RBP7.7□□□□□ -1.18
CDC42BPA-204ENST00000366767 CCDC88BA6NC98 1476 aa7.68□□□□□ -1.18
CDC42BPA-204ENST00000366767 BAZ1BQ9UIG0 1483 aaKnown RBP7.68□□□□□ -1.18
CDC42BPA-204ENST00000366767 WIZO95785 1651 aa7.66□□□□□ -1.18
CDC42BPA-204ENST00000366767 ACIN1Q9UKV3 1341 aaKnown RBP7.66□□□□□ -1.18
CDC42BPA-204ENST00000366767 CLIP1P30622 1438 aa7.66□□□□□ -1.18
CDC42BPA-204ENST00000366767 CLSPNQ9HAW4 1339 aa7.64□□□□□ -1.19
CDC42BPA-204ENST00000366767 SMARCA2P51531 1590 aa7.64□□□□□ -1.19
CDC42BPA-204ENST00000366767 ITGAEP38570 1179 aa7.63□□□□□ -1.19
CDC42BPA-204ENST00000366767 SMARCA4P51532 1647 aa7.63□□□□□ -1.19
CDC42BPA-204ENST00000366767 GTF3C3Q9Y5Q9 886 aa7.61□□□□□ -1.19
CDC42BPA-204ENST00000366767 KIF27Q86VH2 1401 aa7.6□□□□□ -1.19
CDC42BPA-204ENST00000366767 FAM50AQ14320 339 aaKnown RBP7.59□□□□□ -1.19
CDC42BPA-204ENST00000366767 SOGA1O94964 1423 aa7.59□□□□□ -1.2
CDC42BPA-204ENST00000366767 ABCC8Q09428 1581 aa7.56□□□□□ -1.2
CDC42BPA-204ENST00000366767 VPS8Q8N3P4 1428 aa7.56□□□□□ -1.2
CDC42BPA-204ENST00000366767 ATAD2BQ9ULI0 1458 aa7.54□□□□□ -1.2
CDC42BPA-204ENST00000366767 GLIPR1L2Q4G1C9 344 aa7.53□□□□□ -1.2
CDC42BPA-204ENST00000366767 EIF5BO60841 1220 aaKnown RBP7.51□□□□□ -1.21
CDC42BPA-204ENST00000366767 ANP32CO43423 234 aa7.51□□□□□ -1.21
CDC42BPA-204ENST00000366767 NEUROD1Q13562 356 aa7.49□□□□□ -1.21
CDC42BPA-204ENST00000366767 FHAD1B1AJZ9 1412 aa7.49□□□□□ -1.21
CDC42BPA-204ENST00000366767 TIMELESSQ9UNS1 1208 aa7.49□□□□□ -1.21
CDC42BPA-204ENST00000366767 TRIM52Q96A61 297 aa7.47□□□□□ -1.21
CDC42BPA-204ENST00000366767 CDK11AQ9UQ88 783 aaPredicted RBP7.47□□□□□ -1.21
CDC42BPA-204ENST00000366767 SCAF1Q9H7N4 1312 aaKnown RBP7.47□□□□□ -1.21
CDC42BPA-204ENST00000366767 P3H3Q8IVL6 736 aa7.46□□□□□ -1.22
CDC42BPA-204ENST00000366767 BCANQ96GW7 911 aa7.45□□□□□ -1.22
CDC42BPA-204ENST00000366767 CCNB3Q8WWL7 1395 aa7.45□□□□□ -1.22
CDC42BPA-204ENST00000366767 KIF21BO75037 1637 aa7.45□□□□□ -1.22
CDC42BPA-204ENST00000366767 TONSLQ96HA7 1378 aa7.44□□□□□ -1.22
CDC42BPA-204ENST00000366767 CARMIL1Q5VZK9 1371 aa7.44□□□□□ -1.22
CDC42BPA-204ENST00000366767 MTUS2Q5JR59 1369 aa7.43□□□□□ -1.22
CDC42BPA-204ENST00000366767 MIER1Q8N108 512 aa7.43□□□□□ -1.22
CDC42BPA-204ENST00000366767 MYT1LQ9UL68 1186 aa7.43□□□□□ -1.22
CDC42BPA-204ENST00000366767 CUX2O14529 1486 aa7.43□□□□□ -1.22
CDC42BPA-204ENST00000366767 NCAPD3P42695 1498 aa7.43□□□□□ -1.22
CDC42BPA-204ENST00000366767 RUSC2Q8N2Y8 1516 aa7.42□□□□□ -1.22
CDC42BPA-204ENST00000366767 RAPGEF2Q9Y4G8 1499 aa7.41□□□□□ -1.22
CDC42BPA-204ENST00000366767 CADPSQ9ULU8 1353 aa7.41□□□□□ -1.22
CDC42BPA-204ENST00000366767 PEG3Q9GZU2 1588 aa7.41□□□□□ -1.22
CDC42BPA-204ENST00000366767 ERICH3Q5RHP9 1530 aa7.4□□□□□ -1.22
CDC42BPA-204ENST00000366767 SETD5Q9C0A6 1442 aa7.38□□□□□ -1.23
CDC42BPA-204ENST00000366767 HMGXB3Q12766 1538 aa7.36□□□□□ -1.23
CDC42BPA-204ENST00000366767 FMN1Q68DA7 1419 aa7.36□□□□□ -1.23
CDC42BPA-204ENST00000366767 DDX10Q13206 875 aaKnown RBP7.36□□□□□ -1.23
CDC42BPA-204ENST00000366767 TOP2BQ02880 1626 aa7.35□□□□□ -1.23
CDC42BPA-204ENST00000366767 ARHGAP35Q9NRY4 1499 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms