RNA–Protein interactions for RNA: ENST00000568278.1

CYBA-209, Transcript of cytochrome b-245 alpha chain, humanhuman

TSL 5

Gene CYBA, Length 439 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYBA-209ENST00000568278 NISCHQ9Y2I1 1504 aa31.85■■■□□ 2.69
CYBA-209ENST00000568278 CCDC180Q9P1Z9 1646 aa28.31■■■□□ 2.12
CYBA-209ENST00000568278 ABCC9O60706 1549 aa27.93■■■□□ 2.06
CYBA-209ENST00000568278 DCAF8L2P0C7V8 631 aa26.85■■□□□ 1.89
CYBA-209ENST00000568278 RB1CC1Q8TDY2 1594 aa26.78■■□□□ 1.88
CYBA-209ENST00000568278 NACADO15069 1562 aa26.73■■□□□ 1.87
CYBA-209ENST00000568278 MYO15BQ96JP2 1530 aa26.51■■□□□ 1.83
CYBA-209ENST00000568278 ZCCHC6Q5VYS8 1495 aaKnown RBP26.45■■□□□ 1.82
CYBA-209ENST00000568278 DCAF1Q9Y4B6 1507 aa26.33■■□□□ 1.81
CYBA-209ENST00000568278 PABPN1Q86U42 306 aaKnown RBP eCLIP26.16■■□□□ 1.78
CYBA-209ENST00000568278 UNC13AQ9UPW8 1703 aa26.11■■□□□ 1.77
CYBA-209ENST00000568278 BICRAQ9NZM4 1560 aa25.95■■□□□ 1.75
CYBA-209ENST00000568278 DNAJC5BQ9UF47 199 aa25.87■■□□□ 1.73
CYBA-209ENST00000568278 SCRIBQ14160 1630 aa25.84■■□□□ 1.73
CYBA-209ENST00000568278 SHROOM4Q9ULL8 1493 aa25.66■■□□□ 1.7
CYBA-209ENST00000568278 EIF4G1Q04637 1599 aaKnown RBP25.29■■□□□ 1.64
CYBA-209ENST00000568278 CC2D2AQ9P2K1 1620 aa25.23■■□□□ 1.63
CYBA-209ENST00000568278 CECR2Q9BXF3 1484 aa25.13■■□□□ 1.61
CYBA-209ENST00000568278 SMARCA4P51532 1647 aa24.71■■□□□ 1.55
CYBA-209ENST00000568278 NCAPD3P42695 1498 aa24.7■■□□□ 1.55
CYBA-209ENST00000568278 BAZ1AQ9NRL2 1556 aaPredicted RBP24.68■■□□□ 1.54
CYBA-209ENST00000568278 ATAD2BQ9ULI0 1458 aa24.66■■□□□ 1.54
CYBA-209ENST00000568278 SMARCA2P51531 1590 aa24.61■■□□□ 1.53
CYBA-209ENST00000568278 MROH2BQ7Z745 1585 aa24.53■■□□□ 1.52
CYBA-209ENST00000568278 HMGXB3Q12766 1538 aa24.48■■□□□ 1.51
CYBA-209ENST00000568278 PEG3Q9GZU2 1588 aa24.48■■□□□ 1.51
CYBA-209ENST00000568278 BAZ1BQ9UIG0 1483 aaKnown RBP24.45■■□□□ 1.5
CYBA-209ENST00000568278 WIZO95785 1651 aa24.25■■□□□ 1.47
CYBA-209ENST00000568278 RSF1Q96T23 1441 aaPredicted RBP24.23■■□□□ 1.47
CYBA-209ENST00000568278 NESP48681 1621 aa24.12■■□□□ 1.45
CYBA-209ENST00000568278 ERCC6Q03468 1493 aa24.1■■□□□ 1.45
CYBA-209ENST00000568278 LAMC3Q9Y6N6 1575 aa24.02■■□□□ 1.44
CYBA-209ENST00000568278 CADPSQ9ULU8 1353 aa23.99■■□□□ 1.43
CYBA-209ENST00000568278 TOP2AP11388 1531 aaKnown RBP23.96■■□□□ 1.43
CYBA-209ENST00000568278 PDS5BQ9NTI5 1447 aa23.93■■□□□ 1.42
CYBA-209ENST00000568278 CUX2O14529 1486 aa23.89■■□□□ 1.42
CYBA-209ENST00000568278 CFTRP13569 1480 aa23.78■■□□□ 1.4
CYBA-209ENST00000568278 KIF21AQ7Z4S6 1674 aa23.77■■□□□ 1.4
CYBA-209ENST00000568278 CCDC88BA6NC98 1476 aa23.75■■□□□ 1.39
CYBA-209ENST00000568278 THOC2Q8NI27 1593 aaKnown RBP23.71■■□□□ 1.39
CYBA-209ENST00000568278 FANCD2Q9BXW9 1451 aa23.68■■□□□ 1.38
CYBA-209ENST00000568278 CEP164Q9UPV0 1460 aa23.64■■□□□ 1.38
CYBA-209ENST00000568278 MRC2Q9UBG0 1479 aa23.63■■□□□ 1.37
CYBA-209ENST00000568278 SUPT5HO00267 1087 aaKnown RBP23.59■■□□□ 1.37
CYBA-209ENST00000568278 WDR62O43379 1518 aa23.54■■□□□ 1.36
CYBA-209ENST00000568278 PRDM2Q13029 1718 aa23.47■■□□□ 1.35
CYBA-209ENST00000568278 DNAJC5Q9H3Z4 198 aa23.46■■□□□ 1.35
CYBA-209ENST00000568278 URB2Q14146 1524 aaKnown RBP23.42■■□□□ 1.34
CYBA-209ENST00000568278 ABCC8Q09428 1581 aa23.31■■□□□ 1.32
CYBA-209ENST00000568278 TOPBP1Q92547 1522 aa23.26■■□□□ 1.31
CYBA-209ENST00000568278 DNMBPQ6XZF7 1577 aa23.19■■□□□ 1.3
CYBA-209ENST00000568278 IFT140Q96RY7 1462 aa23.17■■□□□ 1.3
CYBA-209ENST00000568278 ZNF608Q9ULD9 1512 aaPredicted RBP23.07■■□□□ 1.28
CYBA-209ENST00000568278 POLA1P09884 1462 aaPredicted RBP23.05■■□□□ 1.28
CYBA-209ENST00000568278 SOGA1O94964 1423 aa23.03■■□□□ 1.28
CYBA-209ENST00000568278 OSCARQ8IYS5 282 aa23.01■■□□□ 1.27
CYBA-209ENST00000568278 CUX1P39880 1505 aa23.01■■□□□ 1.27
CYBA-209ENST00000568278 TARBP1Q13395 1621 aaKnown RBP22.99■■□□□ 1.27
CYBA-209ENST00000568278 RAD54L2Q9Y4B4 1467 aa22.98■■□□□ 1.27
CYBA-209ENST00000568278 FGD5Q6ZNL6 1462 aa22.97■■□□□ 1.27
CYBA-209ENST00000568278 AQRO60306 1485 aaKnown RBP eCLIP22.96■■□□□ 1.278e-7■■■■■ 38.1
CYBA-209ENST00000568278 TDRD9Q8NDG6 1382 aaKnown RBP22.91■■□□□ 1.26
CYBA-209ENST00000568278 EIF4G3O43432 1585 aaKnown RBP22.9■■□□□ 1.26
CYBA-209ENST00000568278 WRNQ14191 1432 aaPredicted RBP eCLIP22.85■■□□□ 1.25
CYBA-209ENST00000568278 WDR97A6NE52 1622 aa22.79■■□□□ 1.24
CYBA-209ENST00000568278 FBLN2P98095 1184 aa22.79■■□□□ 1.24
CYBA-209ENST00000568278 TOP2BQ02880 1626 aa22.77■■□□□ 1.24
CYBA-209ENST00000568278 ABCA10Q8WWZ4 1543 aa22.75■■□□□ 1.23
CYBA-209ENST00000568278 BIVM-ERCC5R4GMW8 1640 aa22.74■■□□□ 1.23
CYBA-209ENST00000568278 SYNJ1O43426 1573 aa22.73■■□□□ 1.23
CYBA-209ENST00000568278 GRIN2BQ13224 1484 aa22.73■■□□□ 1.23
CYBA-209ENST00000568278 GAPVD1Q14C86 1478 aa22.72■■□□□ 1.23
CYBA-209ENST00000568278 CHMP7Q8WUX9 453 aaPredicted RBP22.71■■□□□ 1.23
CYBA-209ENST00000568278 SNAPC4Q5SXM2 1469 aa22.68■■□□□ 1.22
CYBA-209ENST00000568278 MAGI1Q96QZ7 1491 aaPredicted RBP22.66■■□□□ 1.22
CYBA-209ENST00000568278 CHD1O14646 1710 aa22.65■■□□□ 1.22
CYBA-209ENST00000568278 ABCA5Q8WWZ7 1642 aa22.61■■□□□ 1.21
CYBA-209ENST00000568278 TRIM41Q8WV44 630 aa22.6■■□□□ 1.21
CYBA-209ENST00000568278 SYNJ2O15056 1496 aa22.6■■□□□ 1.21
CYBA-209ENST00000568278 PBRM1Q86U86 1689 aa22.58■■□□□ 1.21
CYBA-209ENST00000568278 ARHGEF11O15085 1522 aa22.49■■□□□ 1.19
CYBA-209ENST00000568278 RIMBP3CA6NJZ7 1639 aa22.49■■□□□ 1.19
CYBA-209ENST00000568278 RIMBP3BA6NNM3 1639 aa22.49■■□□□ 1.19
CYBA-209ENST00000568278 RIMBP3Q9UFD9 1639 aa22.49■■□□□ 1.19
CYBA-209ENST00000568278 ERICH3Q5RHP9 1530 aa22.47■■□□□ 1.19
CYBA-209ENST00000568278 FHAD1B1AJZ9 1412 aa22.46■■□□□ 1.19
CYBA-209ENST00000568278 CYB5RLQ6IPT4 315 aa22.42■■□□□ 1.18
CYBA-209ENST00000568278 CLASP1Q7Z460 1538 aa22.41■■□□□ 1.18
CYBA-209ENST00000568278 GRIN2AQ12879 1464 aa22.41■■□□□ 1.18
CYBA-209ENST00000568278 KIF27Q86VH2 1401 aa22.4■■□□□ 1.18
CYBA-209ENST00000568278 ADAMTS12P58397 1594 aa22.4■■□□□ 1.18
CYBA-209ENST00000568278 IGF1RP08069 1367 aa22.37■■□□□ 1.17
CYBA-209ENST00000568278 NUP160Q12769 1436 aa22.32■■□□□ 1.16
CYBA-209ENST00000568278 ARAP1Q96P48 1450 aa22.28■■□□□ 1.16
CYBA-209ENST00000568278 CEP170Q5SW79 1584 aa22.28■■□□□ 1.16
CYBA-209ENST00000568278 CARMIL1Q5VZK9 1371 aa22.23■■□□□ 1.15
CYBA-209ENST00000568278 JPH4Q96JJ6 628 aa22.22■■□□□ 1.15
CYBA-209ENST00000568278 CUL7Q14999 1698 aa22.2■■□□□ 1.14
CYBA-209ENST00000568278 RUSC2Q8N2Y8 1516 aa22.14■■□□□ 1.13
CYBA-209ENST00000568278 SHROOM2Q13796 1616 aa22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms