Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDC42SE2Q9NRR3 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CDC42SE2Q9NRR3 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDC42SE2Q9NRR3 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDC42SE2Q9NRR3 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDC42SE2Q9NRR3 EBPL-202ENST00000378268 680 ntTSL 3 BASIC17.64■□□□□ 0.41
CDC42SE2Q9NRR3 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
CDC42SE2Q9NRR3 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDC42SE2Q9NRR3 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CDC42SE2Q9NRR3 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDC42SE2Q9NRR3 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDC42SE2Q9NRR3 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC17.62■□□□□ 0.41
CDC42SE2Q9NRR3 AL391121.1-201ENST00000607967 1349 ntBASIC17.62■□□□□ 0.41
CDC42SE2Q9NRR3 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC17.62■□□□□ 0.41
CDC42SE2Q9NRR3 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
CDC42SE2Q9NRR3 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDC42SE2Q9NRR3 LINC01003-201ENST00000564834 1764 ntBASIC17.61■□□□□ 0.41
CDC42SE2Q9NRR3 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
CDC42SE2Q9NRR3 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CDC42SE2Q9NRR3 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC17.61■□□□□ 0.41
CDC42SE2Q9NRR3 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC17.61■□□□□ 0.41
CDC42SE2Q9NRR3 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC17.6■□□□□ 0.41
CDC42SE2Q9NRR3 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDC42SE2Q9NRR3 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDC42SE2Q9NRR3 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
CDC42SE2Q9NRR3 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CDC42SE2Q9NRR3 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
CDC42SE2Q9NRR3 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
CDC42SE2Q9NRR3 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDC42SE2Q9NRR3 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDC42SE2Q9NRR3 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDC42SE2Q9NRR3 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDC42SE2Q9NRR3 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDC42SE2Q9NRR3 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDC42SE2Q9NRR3 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
CDC42SE2Q9NRR3 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDC42SE2Q9NRR3 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
CDC42SE2Q9NRR3 AC100797.4-201ENST00000631653 1827 ntBASIC17.56■□□□□ 0.4
CDC42SE2Q9NRR3 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC17.56■□□□□ 0.4
CDC42SE2Q9NRR3 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC17.56■□□□□ 0.4
CDC42SE2Q9NRR3 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC17.56■□□□□ 0.4
CDC42SE2Q9NRR3 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDC42SE2Q9NRR3 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
CDC42SE2Q9NRR3 CAHM-201ENST00000604200 896 ntBASIC17.55■□□□□ 0.4
CDC42SE2Q9NRR3 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC17.55■□□□□ 0.4
CDC42SE2Q9NRR3 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CDC42SE2Q9NRR3 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CDC42SE2Q9NRR3 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CDC42SE2Q9NRR3 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDC42SE2Q9NRR3 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
CDC42SE2Q9NRR3 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDC42SE2Q9NRR3 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDC42SE2Q9NRR3 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDC42SE2Q9NRR3 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDC42SE2Q9NRR3 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CDC42SE2Q9NRR3 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC17.53■□□□□ 0.4
CDC42SE2Q9NRR3 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC17.52■□□□□ 0.4
CDC42SE2Q9NRR3 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDC42SE2Q9NRR3 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDC42SE2Q9NRR3 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDC42SE2Q9NRR3 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDC42SE2Q9NRR3 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CDC42SE2Q9NRR3 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDC42SE2Q9NRR3 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CDC42SE2Q9NRR3 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
CDC42SE2Q9NRR3 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
CDC42SE2Q9NRR3 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC17.5■□□□□ 0.39
CDC42SE2Q9NRR3 SHF-207ENST00000560540 2062 ntTSL 5 BASIC17.5■□□□□ 0.39
CDC42SE2Q9NRR3 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDC42SE2Q9NRR3 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDC42SE2Q9NRR3 AP002414.2-202ENST00000590929 1450 ntBASIC17.5■□□□□ 0.39
CDC42SE2Q9NRR3 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CDC42SE2Q9NRR3 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDC42SE2Q9NRR3 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CDC42SE2Q9NRR3 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDC42SE2Q9NRR3 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CDC42SE2Q9NRR3 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC17.49■□□□□ 0.39
CDC42SE2Q9NRR3 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDC42SE2Q9NRR3 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDC42SE2Q9NRR3 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CDC42SE2Q9NRR3 AC136428.2-201ENST00000563187 214 ntBASIC17.48■□□□□ 0.39
CDC42SE2Q9NRR3 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CDC42SE2Q9NRR3 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDC42SE2Q9NRR3 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC17.47■□□□□ 0.39
CDC42SE2Q9NRR3 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CDC42SE2Q9NRR3 AC097358.2-201ENST00000607541 1159 ntBASIC17.47■□□□□ 0.39
CDC42SE2Q9NRR3 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDC42SE2Q9NRR3 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC17.47■□□□□ 0.39
CDC42SE2Q9NRR3 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
CDC42SE2Q9NRR3 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC17.47■□□□□ 0.39
CDC42SE2Q9NRR3 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDC42SE2Q9NRR3 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDC42SE2Q9NRR3 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDC42SE2Q9NRR3 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
CDC42SE2Q9NRR3 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
CDC42SE2Q9NRR3 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
CDC42SE2Q9NRR3 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDC42SE2Q9NRR3 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDC42SE2Q9NRR3 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC17.45■□□□□ 0.38
CDC42SE2Q9NRR3 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 10 ms