Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC27.1■■□□□ 1.93
CALR3Q96L12 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC27.1■■□□□ 1.93
CALR3Q96L12 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
CALR3Q96L12 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC27.1■■□□□ 1.93
CALR3Q96L12 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC27.09■■□□□ 1.93
CALR3Q96L12 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
CALR3Q96L12 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC27.09■■□□□ 1.93
CALR3Q96L12 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC27.08■■□□□ 1.93
CALR3Q96L12 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC27.08■■□□□ 1.92
CALR3Q96L12 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC27.07■■□□□ 1.92
CALR3Q96L12 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC27.07■■□□□ 1.92
CALR3Q96L12 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC27.07■■□□□ 1.92
CALR3Q96L12 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC27.07■■□□□ 1.92
CALR3Q96L12 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC27.06■■□□□ 1.92
CALR3Q96L12 CREM-210ENST00000374721 2020 ntTSL 5 BASIC27.06■■□□□ 1.92
CALR3Q96L12 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
CALR3Q96L12 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC27.05■■□□□ 1.92
CALR3Q96L12 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
CALR3Q96L12 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
CALR3Q96L12 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
CALR3Q96L12 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC27.04■■□□□ 1.92
CALR3Q96L12 LINC01003-201ENST00000564834 1764 ntBASIC27.04■■□□□ 1.92
CALR3Q96L12 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC27.04■■□□□ 1.92
CALR3Q96L12 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC27.03■■□□□ 1.92
CALR3Q96L12 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC27.03■■□□□ 1.92
CALR3Q96L12 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC27.03■■□□□ 1.92
CALR3Q96L12 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC27.02■■□□□ 1.92
CALR3Q96L12 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC27.02■■□□□ 1.92
CALR3Q96L12 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
CALR3Q96L12 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
CALR3Q96L12 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC27.02■■□□□ 1.92
CALR3Q96L12 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
CALR3Q96L12 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
CALR3Q96L12 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC27.01■■□□□ 1.91
CALR3Q96L12 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC27.01■■□□□ 1.91
CALR3Q96L12 CHML-205ENST00000638160 705 ntTSL 3 BASIC27.01■■□□□ 1.91
CALR3Q96L12 MIR762-201ENST00000390236 83 ntBASIC27■■□□□ 1.91
CALR3Q96L12 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC27■■□□□ 1.91
CALR3Q96L12 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC27■■□□□ 1.91
CALR3Q96L12 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC27■■□□□ 1.91
CALR3Q96L12 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC26.98■■□□□ 1.91
CALR3Q96L12 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
CALR3Q96L12 AP002414.2-202ENST00000590929 1450 ntBASIC26.98■■□□□ 1.91
CALR3Q96L12 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
CALR3Q96L12 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
CALR3Q96L12 AC100797.4-201ENST00000631653 1827 ntBASIC26.97■■□□□ 1.91
CALR3Q96L12 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
CALR3Q96L12 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC26.96■■□□□ 1.91
CALR3Q96L12 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC26.96■■□□□ 1.91
CALR3Q96L12 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC26.96■■□□□ 1.91
CALR3Q96L12 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
CALR3Q96L12 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
CALR3Q96L12 RPS2-209ENST00000529806 993 ntTSL 3 BASIC26.95■■□□□ 1.9
CALR3Q96L12 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
CALR3Q96L12 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC26.95■■□□□ 1.9
CALR3Q96L12 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
CALR3Q96L12 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC26.94■■□□□ 1.9
CALR3Q96L12 MEST-211ENST00000437945 1455 ntTSL 5 BASIC26.93■■□□□ 1.9
CALR3Q96L12 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC26.93■■□□□ 1.9
CALR3Q96L12 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC26.93■■□□□ 1.9
CALR3Q96L12 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
CALR3Q96L12 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC26.92■■□□□ 1.9
CALR3Q96L12 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC26.92■■□□□ 1.9
CALR3Q96L12 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC26.92■■□□□ 1.9
CALR3Q96L12 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
CALR3Q96L12 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC26.91■■□□□ 1.9
CALR3Q96L12 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
CALR3Q96L12 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
CALR3Q96L12 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC26.9■■□□□ 1.9
CALR3Q96L12 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC26.9■■□□□ 1.9
CALR3Q96L12 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC26.89■■□□□ 1.9
CALR3Q96L12 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC26.89■■□□□ 1.9
CALR3Q96L12 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC26.89■■□□□ 1.9
CALR3Q96L12 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
CALR3Q96L12 SHF-207ENST00000560540 2062 ntTSL 5 BASIC26.88■■□□□ 1.89
CALR3Q96L12 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC26.88■■□□□ 1.89
CALR3Q96L12 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
CALR3Q96L12 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
CALR3Q96L12 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC26.87■■□□□ 1.89
CALR3Q96L12 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC26.87■■□□□ 1.89
CALR3Q96L12 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC26.87■■□□□ 1.89
CALR3Q96L12 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
CALR3Q96L12 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC26.87■■□□□ 1.89
CALR3Q96L12 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
CALR3Q96L12 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC26.86■■□□□ 1.89
CALR3Q96L12 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
CALR3Q96L12 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
CALR3Q96L12 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC26.86■■□□□ 1.89
CALR3Q96L12 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
CALR3Q96L12 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC26.85■■□□□ 1.89
CALR3Q96L12 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
CALR3Q96L12 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC26.85■■□□□ 1.89
CALR3Q96L12 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC26.84■■□□□ 1.89
CALR3Q96L12 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC26.84■■□□□ 1.89
CALR3Q96L12 AC005559.1-201ENST00000589661 871 ntBASIC26.84■■□□□ 1.89
CALR3Q96L12 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC26.84■■□□□ 1.89
CALR3Q96L12 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
CALR3Q96L12 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC26.84■■□□□ 1.89
CALR3Q96L12 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
CALR3Q96L12 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC26.83■■□□□ 1.89
Retrieved 100 of 98,524 protein–RNA pairs in 159.7 ms