Protein–RNA interactions for Protein: O75340

PDCD6, Programmed cell death protein 6, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6O75340 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC21.63■■□□□ 1.05
PDCD6O75340 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC21.63■■□□□ 1.05
PDCD6O75340 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
PDCD6O75340 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
PDCD6O75340 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
PDCD6O75340 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PDCD6O75340 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC21.62■■□□□ 1.05
PDCD6O75340 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC21.62■■□□□ 1.05
PDCD6O75340 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
PDCD6O75340 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC21.62■■□□□ 1.05
PDCD6O75340 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PDCD6O75340 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC21.61■■□□□ 1.05
PDCD6O75340 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
PDCD6O75340 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PDCD6O75340 MIR762-201ENST00000390236 83 ntBASIC21.6■■□□□ 1.05
PDCD6O75340 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PDCD6O75340 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
PDCD6O75340 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
PDCD6O75340 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
PDCD6O75340 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
PDCD6O75340 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
PDCD6O75340 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC21.58■■□□□ 1.04
PDCD6O75340 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
PDCD6O75340 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC21.57■■□□□ 1.04
PDCD6O75340 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PDCD6O75340 SHF-208ENST00000560734 1731 ntTSL 3 BASIC21.56■■□□□ 1.04
PDCD6O75340 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
PDCD6O75340 RPS2-209ENST00000529806 993 ntTSL 3 BASIC21.56■■□□□ 1.04
PDCD6O75340 CHML-205ENST00000638160 705 ntTSL 3 BASIC21.56■■□□□ 1.04
PDCD6O75340 AC100797.4-201ENST00000631653 1827 ntBASIC21.56■■□□□ 1.04
PDCD6O75340 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
PDCD6O75340 LINC01003-201ENST00000564834 1764 ntBASIC21.55■■□□□ 1.04
PDCD6O75340 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PDCD6O75340 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
PDCD6O75340 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC21.54■■□□□ 1.04
PDCD6O75340 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PDCD6O75340 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
PDCD6O75340 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC21.54■■□□□ 1.04
PDCD6O75340 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
PDCD6O75340 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
PDCD6O75340 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC21.53■■□□□ 1.04
PDCD6O75340 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PDCD6O75340 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC21.53■■□□□ 1.04
PDCD6O75340 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC21.53■■□□□ 1.04
PDCD6O75340 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC21.53■■□□□ 1.04
PDCD6O75340 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PDCD6O75340 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC21.52■■□□□ 1.04
PDCD6O75340 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
PDCD6O75340 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC21.52■■□□□ 1.04
PDCD6O75340 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PDCD6O75340 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PDCD6O75340 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PDCD6O75340 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PDCD6O75340 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PDCD6O75340 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PDCD6O75340 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PDCD6O75340 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC21.51■■□□□ 1.03
PDCD6O75340 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PDCD6O75340 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC21.5■■□□□ 1.03
PDCD6O75340 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PDCD6O75340 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PDCD6O75340 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PDCD6O75340 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PDCD6O75340 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC21.5■■□□□ 1.03
PDCD6O75340 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
PDCD6O75340 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PDCD6O75340 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC21.49■■□□□ 1.03
PDCD6O75340 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PDCD6O75340 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PDCD6O75340 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
PDCD6O75340 AP002414.2-202ENST00000590929 1450 ntBASIC21.48■■□□□ 1.03
PDCD6O75340 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PDCD6O75340 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PDCD6O75340 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC21.47■■□□□ 1.03
PDCD6O75340 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PDCD6O75340 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PDCD6O75340 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC21.46■■□□□ 1.03
PDCD6O75340 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC21.46■■□□□ 1.03
PDCD6O75340 AC005559.1-201ENST00000589661 871 ntBASIC21.46■■□□□ 1.03
PDCD6O75340 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PDCD6O75340 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
PDCD6O75340 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
PDCD6O75340 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC21.45■■□□□ 1.03
PDCD6O75340 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC21.45■■□□□ 1.02
PDCD6O75340 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC21.45■■□□□ 1.02
PDCD6O75340 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC21.44■■□□□ 1.02
PDCD6O75340 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PDCD6O75340 CREM-210ENST00000374721 2020 ntTSL 5 BASIC21.44■■□□□ 1.02
PDCD6O75340 MEST-211ENST00000437945 1455 ntTSL 5 BASIC21.44■■□□□ 1.02
PDCD6O75340 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
PDCD6O75340 HNRNPLP2-201ENST00000568980 1570 ntBASIC21.44■■□□□ 1.02
PDCD6O75340 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
PDCD6O75340 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
PDCD6O75340 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
PDCD6O75340 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
PDCD6O75340 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC21.43■■□□□ 1.02
PDCD6O75340 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
PDCD6O75340 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
PDCD6O75340 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
PDCD6O75340 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms