RNA–Protein interactions for RNA: ENST00000367006.8

RCOR3-202, Transcript of REST corepressor 3, humanhuman

TSL 1 (best) BASIC

Gene RCOR3, Length 2,525 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCOR3-202ENST00000367006 NISCHQ9Y2I1 1504 aa53.38■■■■■ 6.14
RCOR3-202ENST00000367006 CCDC180Q9P1Z9 1646 aa45.68■■■■■ 4.9
RCOR3-202ENST00000367006 SHROOM4Q9ULL8 1493 aa45.14■■■■■ 4.82
RCOR3-202ENST00000367006 ZCCHC6Q5VYS8 1495 aaKnown RBP44.94■■■■■ 4.79
RCOR3-202ENST00000367006 DCAF8L2P0C7V8 631 aa44.81■■■■■ 4.76
RCOR3-202ENST00000367006 SUPT5HO00267 1087 aaKnown RBP43.82■■■■■ 4.61
RCOR3-202ENST00000367006 DCAF1Q9Y4B6 1507 aa43.65■■■■■ 4.58
RCOR3-202ENST00000367006 ABCC9O60706 1549 aa43.35■■■■■ 4.53
RCOR3-202ENST00000367006 SCRIBQ14160 1630 aa42.89■■■■■ 4.46
RCOR3-202ENST00000367006 MYO15BQ96JP2 1530 aa42.68■■■■■ 4.42
RCOR3-202ENST00000367006 NACADO15069 1562 aa42.48■■■■■ 4.39
RCOR3-202ENST00000367006 CHIC1Q5VXU3 224 aa42.05■■■■■ 4.32
RCOR3-202ENST00000367006 RB1CC1Q8TDY2 1594 aa42.02■■■■■ 4.32
RCOR3-202ENST00000367006 RSF1Q96T23 1441 aaPredicted RBP41.94■■■■■ 4.3
RCOR3-202ENST00000367006 CECR2Q9BXF3 1484 aa41.82■■■■■ 4.28
RCOR3-202ENST00000367006 MROH2BQ7Z745 1585 aa41.53■■■■■ 4.24
RCOR3-202ENST00000367006 UNC13AQ9UPW8 1703 aa41.44■■■■■ 4.22
RCOR3-202ENST00000367006 PABPN1Q86U42 306 aaKnown RBP eCLIP41.36■■■■■ 4.21
RCOR3-202ENST00000367006 WIZO95785 1651 aa41.28■■■■■ 4.2
RCOR3-202ENST00000367006 BAZ1AQ9NRL2 1556 aaPredicted RBP41.03■■■■■ 4.16
RCOR3-202ENST00000367006 BICRAQ9NZM4 1560 aa40.97■■■■■ 4.15
RCOR3-202ENST00000367006 LOC105371045A0A1W2PR82 267 aa40.91■■■■■ 4.14
RCOR3-202ENST00000367006 HRCP23327 699 aa40.9■■■■■ 4.14
RCOR3-202ENST00000367006 PCGF6Q9BYE7 350 aa40.85■■■■■ 4.13
RCOR3-202ENST00000367006 SMARCA4P51532 1647 aa40.84■■■■■ 4.13
RCOR3-202ENST00000367006 TRIM41Q8WV44 630 aa40.78■■■■■ 4.12
RCOR3-202ENST00000367006 FAM9AQ8IZU1 332 aaPredicted RBP40.58■■■■■ 4.09
RCOR3-202ENST00000367006 TOP2AP11388 1531 aaKnown RBP40.51■■■■■ 4.08
RCOR3-202ENST00000367006 CCDC88BA6NC98 1476 aa40.4■■■■■ 4.06
RCOR3-202ENST00000367006 EHMT2Q96KQ7 1210 aa40.39■■■■■ 4.06
RCOR3-202ENST00000367006 SMARCA2P51531 1590 aa40.3■■■■■ 4.04
RCOR3-202ENST00000367006 EIF4G1Q04637 1599 aaKnown RBP40.2■■■■■ 4.03
RCOR3-202ENST00000367006 ABCC8Q09428 1581 aa40.08■■■■■ 4.01
RCOR3-202ENST00000367006 PPARGC1BQ86YN6 1023 aaKnown RBP40.05■■■■■ 4
RCOR3-202ENST00000367006 TRIM26Q12899 539 aaPredicted RBP40.04■■■■■ 4
RCOR3-202ENST00000367006 ATAD2BQ9ULI0 1458 aa40.03■■■■■ 4
RCOR3-202ENST00000367006 PEG3Q9GZU2 1588 aa39.99■■■■□ 3.99
RCOR3-202ENST00000367006 BAZ1BQ9UIG0 1483 aaKnown RBP39.88■■■■□ 3.97
RCOR3-202ENST00000367006 SOGA1O94964 1423 aa39.52■■■■□ 3.92
RCOR3-202ENST00000367006 WRNQ14191 1432 aaPredicted RBP eCLIP39.42■■■■□ 3.9
RCOR3-202ENST00000367006 RUSC2Q8N2Y8 1516 aa39.41■■■■□ 3.9
RCOR3-202ENST00000367006 NCAPD3P42695 1498 aa39.34■■■■□ 3.89
RCOR3-202ENST00000367006 SYNJ1O43426 1573 aa39.29■■■■□ 3.88
RCOR3-202ENST00000367006 HMGXB3Q12766 1538 aa39.23■■■■□ 3.87
RCOR3-202ENST00000367006 ZEB1P37275 1124 aaPredicted RBP39.18■■■■□ 3.86
RCOR3-202ENST00000367006 CSRNP3Q8WYN3 585 aa39.16■■■■□ 3.86
RCOR3-202ENST00000367006 UBTFP17480 764 aaKnown RBP39.02■■■■□ 3.84
RCOR3-202ENST00000367006 CC2D2AQ9P2K1 1620 aa38.94■■■■□ 3.82
RCOR3-202ENST00000367006 EEA1Q15075 1411 aa38.92■■■■□ 3.82
RCOR3-202ENST00000367006 CEP162Q5TB80 1403 aa38.85■■■■□ 3.81
RCOR3-202ENST00000367006 TTBK1Q5TCY1 1321 aaPredicted RBP38.81■■■■□ 3.8
RCOR3-202ENST00000367006 CFTRP13569 1480 aa38.81■■■■□ 3.8
RCOR3-202ENST00000367006 TOP2BQ02880 1626 aa38.8■■■■□ 3.8
RCOR3-202ENST00000367006 TNIKQ9UKE5 1360 aa38.78■■■■□ 3.8
RCOR3-202ENST00000367006 GOLGA3Q08378 1498 aa38.73■■■■□ 3.79
RCOR3-202ENST00000367006 CUX1P39880 1505 aa38.7■■■■□ 3.79
RCOR3-202ENST00000367006 RANGAP1P46060 587 aaPredicted RBP38.67■■■■□ 3.78
RCOR3-202ENST00000367006 BIVM-ERCC5R4GMW8 1640 aa38.65■■■■□ 3.78
RCOR3-202ENST00000367006 CADPSQ9ULU8 1353 aa38.59■■■■□ 3.77
RCOR3-202ENST00000367006 CEP164Q9UPV0 1460 aa38.59■■■■□ 3.77
RCOR3-202ENST00000367006 RAPGEF2Q9Y4G8 1499 aa38.57■■■■□ 3.76
RCOR3-202ENST00000367006 KIF21BO75037 1637 aa38.49■■■■□ 3.75
RCOR3-202ENST00000367006 DNAJC5BQ9UF47 199 aa38.46■■■■□ 3.75
RCOR3-202ENST00000367006 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP38.44■■■■□ 3.74
RCOR3-202ENST00000367006 NESP48681 1621 aa38.37■■■■□ 3.73
RCOR3-202ENST00000367006 PRDM2Q13029 1718 aa38.36■■■■□ 3.73
RCOR3-202ENST00000367006 CCER1Q8TC90 406 aaPredicted RBP38.34■■■■□ 3.73
RCOR3-202ENST00000367006 CLIP1P30622 1438 aa38.31■■■■□ 3.72
RCOR3-202ENST00000367006 KIF27Q86VH2 1401 aa38.25■■■■□ 3.71
RCOR3-202ENST00000367006 FANCD2Q9BXW9 1451 aa38.24■■■■□ 3.71
RCOR3-202ENST00000367006 PRXQ9BXM0 1461 aa38.19■■■■□ 3.7
RCOR3-202ENST00000367006 FGD5Q6ZNL6 1462 aa38.16■■■■□ 3.7
RCOR3-202ENST00000367006 CUX2O14529 1486 aa38.16■■■■□ 3.7
RCOR3-202ENST00000367006 ERICH3Q5RHP9 1530 aa38.02■■■■□ 3.68
RCOR3-202ENST00000367006 VPS8Q8N3P4 1428 aa37.97■■■■□ 3.67
RCOR3-202ENST00000367006 IGF1RP08069 1367 aa37.97■■■■□ 3.67
RCOR3-202ENST00000367006 RAD54L2Q9Y4B4 1467 aa37.97■■■■□ 3.67
RCOR3-202ENST00000367006 TOPBP1Q92547 1522 aa37.88■■■■□ 3.65
RCOR3-202ENST00000367006 APLP2Q06481 763 aa37.85■■■■□ 3.65
RCOR3-202ENST00000367006 DNMBPQ6XZF7 1577 aa37.84■■■■□ 3.65
RCOR3-202ENST00000367006 POLA1P09884 1462 aaPredicted RBP37.82■■■■□ 3.64
RCOR3-202ENST00000367006 CARMIL1Q5VZK9 1371 aa37.8■■■■□ 3.64
RCOR3-202ENST00000367006 ARAP1Q96P48 1450 aa37.8■■■■□ 3.64
RCOR3-202ENST00000367006 LAMC3Q9Y6N6 1575 aa37.79■■■■□ 3.64
RCOR3-202ENST00000367006 URB2Q14146 1524 aaKnown RBP37.75■■■■□ 3.63
RCOR3-202ENST00000367006 SCAF1Q9H7N4 1312 aaKnown RBP37.72■■■■□ 3.63
RCOR3-202ENST00000367006 HNRNPUL2Q1KMD3 747 aaKnown RBP37.67■■■■□ 3.62
RCOR3-202ENST00000367006 ARHGAP35Q9NRY4 1499 aa37.63■■■■□ 3.62
RCOR3-202ENST00000367006 DIEXFQ68CQ4 756 aaKnown RBP37.63■■■■□ 3.61
RCOR3-202ENST00000367006 PDS5BQ9NTI5 1447 aa37.62■■■■□ 3.61
RCOR3-202ENST00000367006 KIF21AQ7Z4S6 1674 aa37.61■■■■□ 3.61
RCOR3-202ENST00000367006 ABCA10Q8WWZ4 1543 aa37.61■■■■□ 3.61
RCOR3-202ENST00000367006 KANK4Q5T7N3 995 aaPredicted RBP37.6■■■■□ 3.61
RCOR3-202ENST00000367006 TDRD9Q8NDG6 1382 aaKnown RBP37.58■■■■□ 3.61
RCOR3-202ENST00000367006 P3H3Q8IVL6 736 aa37.56■■■■□ 3.6
RCOR3-202ENST00000367006 ACIN1Q9UKV3 1341 aaKnown RBP37.36■■■■□ 3.57
RCOR3-202ENST00000367006 ZNF316A6NFI3 1004 aaPredicted RBP37.33■■■■□ 3.57
RCOR3-202ENST00000367006 WDR97A6NE52 1622 aa37.33■■■■□ 3.57
RCOR3-202ENST00000367006 NEUROD1Q13562 356 aa37.32■■■■□ 3.56
RCOR3-202ENST00000367006 ATP1B4Q9UN42 357 aaPredicted RBP37.32■■■■□ 3.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms