Protein–RNA interactions for Protein: Q7KZF4

SND1, Staphylococcal nuclease domain-containing protein 1, humanhuman

Known RBP eCLIP

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1Q7KZF4 RPL19-202ENST00000577741 1303 ntTSL 29.91□□□□□ -0.828e-17■■■□□ 14.8
SND1Q7KZF4 EMC3-201ENST00000245046 2777 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.721e-7■■■□□ 14.8
SND1Q7KZF4 KDELR2-204ENST00000462052 382 ntTSL 28.18□□□□□ -1.11e-7■■■□□ 14.8
SND1Q7KZF4 VCL-207ENST00000624354 3307 ntTSL 29.64□□□□□ -0.873e-6■■■□□ 14.8
SND1Q7KZF4 P4HB-222ENST00000576380 943 ntTSL 320.85■□□□□ 0.932e-22■■■□□ 14.8
SND1Q7KZF4 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC26.51■■□□□ 1.831e-7■■■□□ 14.8
SND1Q7KZF4 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC19.67■□□□□ 0.741e-7■■■□□ 14.8
SND1Q7KZF4 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.661e-7■■■□□ 14.8
SND1Q7KZF4 CTSA-214ENST00000606788 3056 ntTSL 217.24■□□□□ 0.351e-7■■■□□ 14.8
SND1Q7KZF4 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC16.23■□□□□ 0.191e-7■■■□□ 14.8
SND1Q7KZF4 PRRC1-206ENST00000513427 837 ntTSL 211.82□□□□□ -0.522e-6■■■□□ 14.8
SND1Q7KZF4 ERGIC3-214ENST00000482338 598 ntTSL 29.14□□□□□ -0.952e-8■■■□□ 14.8
SND1Q7KZF4 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 01e-6■■■□□ 14.8
SND1Q7KZF4 FXYD5-204ENST00000392219 872 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.671e-6■■■□□ 14.8
SND1Q7KZF4 FXYD5-205ENST00000423817 892 ntAPPRIS P2 TSL 2 BASIC10.85□□□□□ -0.671e-6■■■□□ 14.8
SND1Q7KZF4 FXYD5-210ENST00000588699 927 ntTSL 5 BASIC10.42□□□□□ -0.741e-6■■■□□ 14.8
SND1Q7KZF4 FXYD5-211ENST00000590686 862 ntAPPRIS P2 TSL 3 BASIC10.42□□□□□ -0.741e-6■■■□□ 14.8
SND1Q7KZF4 FXYD5-209ENST00000586925 429 ntTSL 310.1□□□□□ -0.791e-6■■■□□ 14.8
SND1Q7KZF4 FXYD5-212ENST00000591716 682 ntTSL 310.1□□□□□ -0.791e-6■■■□□ 14.8
SND1Q7KZF4 FXYD5-202ENST00000392217 632 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.791e-6■■■□□ 14.8
SND1Q7KZF4 FXYD5-207ENST00000541435 898 ntAPPRIS P2 TSL 2 BASIC7.98□□□□□ -1.131e-6■■■□□ 14.8
SND1Q7KZF4 SLC5A9-202ENST00000425816 1950 ntTSL 1 (best)16.75■□□□□ 0.279e-11■■■□□ 14.8
SND1Q7KZF4 SLC5A9-205ENST00000471020 1989 ntTSL 1 (best)15.81■□□□□ 0.129e-11■■■□□ 14.8
SND1Q7KZF4 SLC5A9-210ENST00000533824 2219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.039e-11■■■□□ 14.8
SND1Q7KZF4 SLC5A9-209ENST00000532322 968 ntTSL 1 (best)14.59□□□□□ -0.079e-11■■■□□ 14.8
SND1Q7KZF4 MASP1-212ENST00000480349 5982 ntTSL 214.08□□□□□ -0.161e-6■■■□□ 14.8
SND1Q7KZF4 SLC5A9-203ENST00000438567 3195 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.199e-11■■■□□ 14.8
SND1Q7KZF4 MASP1-203ENST00000337774 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.451e-6■■■□□ 14.8
SND1Q7KZF4 SLC5A9-201ENST00000236495 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.599e-11■■■□□ 14.8
SND1Q7KZF4 SLC5A9-206ENST00000493837 3769 ntTSL 210.9□□□□□ -0.669e-11■■■□□ 14.8
SND1Q7KZF4 MASP1-205ENST00000392472 3900 ntTSL 1 (best) BASIC9.31□□□□□ -0.921e-6■■■□□ 14.8
SND1Q7KZF4 MASP1-211ENST00000468121 498 ntTSL 39.22□□□□□ -0.931e-6■■■□□ 14.8
SND1Q7KZF4 MASP1-202ENST00000296280 4015 ntAPPRIS P4 TSL 1 (best) BASIC9.16□□□□□ -0.941e-6■■■□□ 14.8
SND1Q7KZF4 HLA-F-224ENST00000475996 1505 nt13.32□□□□□ -0.282e-7■■■□□ 14.8
SND1Q7KZF4 CNTNAP1-201ENST00000264638 5276 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.063e-6■■■□□ 14.8
SND1Q7KZF4 CNTNAP1-204ENST00000591662 4499 ntTSL 1 (best)12.38□□□□□ -0.433e-6■■■□□ 14.8
SND1Q7KZF4 ABCC1-207ENST00000575422 1198 ntTSL 516.42■□□□□ 0.224e-7■■■□□ 14.7
SND1Q7KZF4 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.173e-15■■■□□ 14.7
SND1Q7KZF4 SRSF3-206ENST00000620242 544 ntTSL 213.51□□□□□ -0.253e-15■■■□□ 14.7
SND1Q7KZF4 SRSF3-203ENST00000477442 1095 ntTSL 513.48□□□□□ -0.253e-15■■■□□ 14.7
SND1Q7KZF4 SRSF3-201ENST00000339436 1518 ntTSL 213.33□□□□□ -0.283e-15■■■□□ 14.7
SND1Q7KZF4 SRSF3-204ENST00000613941 595 ntTSL 410.94□□□□□ -0.663e-15■■■□□ 14.7
SND1Q7KZF4 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.283e-15■■■□□ 14.7
SND1Q7KZF4 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC18.34■□□□□ 0.531e-7■■■□□ 14.7
SND1Q7KZF4 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.341e-7■■■□□ 14.7
SND1Q7KZF4 ACP2-210ENST00000531004 1457 ntTSL 216.15■□□□□ 0.181e-7■■■□□ 14.7
SND1Q7KZF4 ACP2-213ENST00000534448 2170 ntTSL 515.87■□□□□ 0.131e-7■■■□□ 14.7
SND1Q7KZF4 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC15.46■□□□□ 0.061e-7■■■□□ 14.7
SND1Q7KZF4 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC14.91□□□□□ -0.021e-7■■■□□ 14.7
SND1Q7KZF4 CFB-274ENST00000461483 1277 ntTSL 511.85□□□□□ -0.515e-17■■■□□ 14.7
SND1Q7KZF4 CTSA-212ENST00000606394 584 ntTSL 413.84□□□□□ -0.198e-8■■■□□ 14.7
SND1Q7KZF4 CLTC-207ENST00000483176 760 ntTSL 38.33□□□□□ -1.081e-10■■■□□ 14.7
SND1Q7KZF4 SLC7A1-203ENST00000473577 726 ntTSL 511.95□□□□□ -0.54e-12■■■□□ 14.7
SND1Q7KZF4 ST6GAL1-214ENST00000455441 596 ntTSL 421.09■□□□□ 0.971e-6■■■□□ 14.7
SND1Q7KZF4 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.627e-18■■■□□ 14.7
SND1Q7KZF4 TMED3-205ENST00000558562 938 ntTSL 213.87□□□□□ -0.192e-8■■■□□ 14.7
SND1Q7KZF4 HSPA8-220ENST00000533238 465 ntTSL 36.64□□□□□ -1.351e-21■■■□□ 14.7
SND1Q7KZF4 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC18.77■□□□□ 0.68e-9■■■□□ 14.7
SND1Q7KZF4 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.038e-9■■■□□ 14.7
SND1Q7KZF4 CTNNB1-201ENST00000349496 3737 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.238e-9■■■□□ 14.7
SND1Q7KZF4 CTNNB1-203ENST00000396185 3356 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.288e-9■■■□□ 14.7
SND1Q7KZF4 CTNNB1-204ENST00000405570 2513 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.618e-9■■■□□ 14.7
SND1Q7KZF4 PTK7-217ENST00000490710 582 ntTSL 216.29■□□□□ 0.22e-8■■■□□ 14.7
SND1Q7KZF4 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.347e-23■■■□□ 14.7
SND1Q7KZF4 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 07e-23■■■□□ 14.7
SND1Q7KZF4 CLIC1-209ENST00000395892 1197 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.167e-23■■■□□ 14.7
SND1Q7KZF4 CLIC1-207ENST00000375780 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.427e-23■■■□□ 14.7
SND1Q7KZF4 CLIC1-210ENST00000616760 1098 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.817e-23■■■□□ 14.7
SND1Q7KZF4 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.124e-6■■■□□ 14.7
SND1Q7KZF4 VPS29-204ENST00000548259 563 ntTSL 217.58■□□□□ 0.44e-6■■■□□ 14.7
SND1Q7KZF4 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.47e-8■■■□□ 14.7
SND1Q7KZF4 AHCY-204ENST00000480653 2211 ntTSL 217.09■□□□□ 0.337e-8■■■□□ 14.7
SND1Q7KZF4 VPS29-207ENST00000549970 818 ntTSL 3 BASIC16.82■□□□□ 0.284e-6■■■□□ 14.7
SND1Q7KZF4 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC15.43■□□□□ 0.067e-8■■■□□ 14.7
SND1Q7KZF4 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC14.38□□□□□ -0.114e-6■■■□□ 14.7
SND1Q7KZF4 VPS29-203ENST00000546588 1059 ntTSL 3 BASIC10.3□□□□□ -0.764e-6■■■□□ 14.7
SND1Q7KZF4 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC9.26□□□□□ -0.934e-6■■■□□ 14.7
SND1Q7KZF4 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC9.22□□□□□ -0.934e-6■■■□□ 14.7
SND1Q7KZF4 OCIAD1-206ENST00000502972 1916 ntTSL 28.38□□□□□ -1.074e-13■■■□□ 14.7
SND1Q7KZF4 VPS29-205ENST00000548539 598 ntTSL 37.18□□□□□ -1.264e-6■■■□□ 14.7
SND1Q7KZF4 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC6.75□□□□□ -1.334e-6■■■□□ 14.7
SND1Q7KZF4 OCIAD1-214ENST00000508329 448 ntTSL 56.18□□□□□ -1.424e-13■■■□□ 14.7
SND1Q7KZF4 MDH1-206ENST00000436321 680 ntTSL 39.41□□□□□ -0.91e-11■■■□□ 14.7
SND1Q7KZF4 SLC2A8-204ENST00000419132 506 ntTSL 323.15■■□□□ 1.38e-7■■■□□ 14.7
SND1Q7KZF4 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.64e-11■■■□□ 14.7
SND1Q7KZF4 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.344e-11■■■□□ 14.7
SND1Q7KZF4 TMEM127-203ENST00000435268 582 ntTSL 3 BASIC9.01□□□□□ -0.974e-11■■■□□ 14.7
SND1Q7KZF4 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC15.53■□□□□ 0.082e-11■■■□□ 14.7
SND1Q7KZF4 C2-207ENST00000447952 837 ntTSL 313.86□□□□□ -0.192e-11■■■□□ 14.7
SND1Q7KZF4 C2-208ENST00000452202 539 ntTSL 412.84□□□□□ -0.352e-11■■■□□ 14.7
SND1Q7KZF4 FN1-218ENST00000473614 568 ntTSL 27.38□□□□□ -1.232e-6■■■□□ 14.7
SND1Q7KZF4 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC26.02■■□□□ 1.762e-6■■■□□ 14.7
SND1Q7KZF4 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.562e-6■■■□□ 14.7
SND1Q7KZF4 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC22.55■■□□□ 1.22e-6■■■□□ 14.7
SND1Q7KZF4 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC18.29■□□□□ 0.522e-6■■■□□ 14.7
SND1Q7KZF4 NDUFAB1-204ENST00000567761 520 ntTSL 36.74□□□□□ -1.333e-7■■■□□ 14.7
SND1Q7KZF4 SNRPF-202ENST00000549580 757 ntTSL 27.21□□□□□ -1.263e-10■■■□□ 14.7
SND1Q7KZF4 CEPT1-202ENST00000460443 851 ntTSL 521.94■■□□□ 1.11e-8■■■□□ 14.7
SND1Q7KZF4 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC23.24■■□□□ 1.314e-9■■■□□ 14.6
SND1Q7KZF4 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.344e-9■■■□□ 14.6
Retrieved 100 of 13,567 protein–RNA pairs in 90.9 ms