RNA–Protein interactions for RNA: ENST00000575422.5

ABCC1-207, Transcript of ATP binding cassette subfamily C member 1, humanhuman

TSL 5

Gene ABCC1, Length 1,198 nt, Biotype retained intron, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC1-207ENST00000575422 NISCHQ9Y2I1 1504 aa39.84■■■■□ 3.97
ABCC1-207ENST00000575422 CCDC180Q9P1Z9 1646 aa35.72■■■■□ 3.31
ABCC1-207ENST00000575422 ABCC9O60706 1549 aa35.7■■■■□ 3.31
ABCC1-207ENST00000575422 RB1CC1Q8TDY2 1594 aa34.02■■■■□ 3.04
ABCC1-207ENST00000575422 NACADO15069 1562 aa33.81■■■■□ 3
ABCC1-207ENST00000575422 DCAF8L2P0C7V8 631 aa33.6■■■□□ 2.97
ABCC1-207ENST00000575422 DNAJC5BQ9UF47 199 aa33.52■■■□□ 2.96
ABCC1-207ENST00000575422 MYO15BQ96JP2 1530 aa33.39■■■□□ 2.94
ABCC1-207ENST00000575422 PABPN1Q86U42 306 aaKnown RBP eCLIP33.25■■■□□ 2.91
ABCC1-207ENST00000575422 UNC13AQ9UPW8 1703 aa33.16■■■□□ 2.9
ABCC1-207ENST00000575422 BICRAQ9NZM4 1560 aa33.01■■■□□ 2.88
ABCC1-207ENST00000575422 ZCCHC6Q5VYS8 1495 aaKnown RBP33■■■□□ 2.87
ABCC1-207ENST00000575422 DCAF1Q9Y4B6 1507 aa32.95■■■□□ 2.87
ABCC1-207ENST00000575422 SHROOM4Q9ULL8 1493 aa32.64■■■□□ 2.82
ABCC1-207ENST00000575422 SCRIBQ14160 1630 aa32.49■■■□□ 2.79
ABCC1-207ENST00000575422 CC2D2AQ9P2K1 1620 aa32.26■■■□□ 2.75
ABCC1-207ENST00000575422 EIF4G1Q04637 1599 aaKnown RBP32.2■■■□□ 2.75
ABCC1-207ENST00000575422 CECR2Q9BXF3 1484 aa32.19■■■□□ 2.74
ABCC1-207ENST00000575422 NCAPD3P42695 1498 aa31.24■■■□□ 2.59
ABCC1-207ENST00000575422 ATAD2BQ9ULI0 1458 aa31.11■■■□□ 2.57
ABCC1-207ENST00000575422 SMARCA4P51532 1647 aa31.04■■■□□ 2.56
ABCC1-207ENST00000575422 SMARCA2P51531 1590 aa31.03■■■□□ 2.56
ABCC1-207ENST00000575422 HMGXB3Q12766 1538 aa30.97■■■□□ 2.55
ABCC1-207ENST00000575422 BAZ1AQ9NRL2 1556 aaPredicted RBP30.92■■■□□ 2.54
ABCC1-207ENST00000575422 ERCC6Q03468 1493 aa30.83■■■□□ 2.53
ABCC1-207ENST00000575422 DNAJC5Q9H3Z4 198 aa30.83■■■□□ 2.53
ABCC1-207ENST00000575422 CUX2O14529 1486 aa30.82■■■□□ 2.53
ABCC1-207ENST00000575422 BAZ1BQ9UIG0 1483 aaKnown RBP30.79■■■□□ 2.52
ABCC1-207ENST00000575422 PEG3Q9GZU2 1588 aa30.79■■■□□ 2.52
ABCC1-207ENST00000575422 MROH2BQ7Z745 1585 aa30.66■■■□□ 2.5
ABCC1-207ENST00000575422 NESP48681 1621 aa30.65■■■□□ 2.5
ABCC1-207ENST00000575422 LAMC3Q9Y6N6 1575 aa30.5■■■□□ 2.47
ABCC1-207ENST00000575422 PDS5BQ9NTI5 1447 aa30.35■■■□□ 2.45
ABCC1-207ENST00000575422 THOC2Q8NI27 1593 aaKnown RBP30.35■■■□□ 2.45
ABCC1-207ENST00000575422 CADPSQ9ULU8 1353 aa30.28■■■□□ 2.44
ABCC1-207ENST00000575422 WIZO95785 1651 aa30.27■■■□□ 2.44
ABCC1-207ENST00000575422 KIF21AQ7Z4S6 1674 aa30.23■■■□□ 2.43
ABCC1-207ENST00000575422 RSF1Q96T23 1441 aaPredicted RBP30.06■■■□□ 2.4
ABCC1-207ENST00000575422 MRC2Q9UBG0 1479 aa30.05■■■□□ 2.4
ABCC1-207ENST00000575422 WDR62O43379 1518 aa29.97■■■□□ 2.39
ABCC1-207ENST00000575422 CFTRP13569 1480 aa29.93■■■□□ 2.38
ABCC1-207ENST00000575422 CEP164Q9UPV0 1460 aa29.93■■■□□ 2.38
ABCC1-207ENST00000575422 TOP2AP11388 1531 aaKnown RBP29.92■■■□□ 2.38
ABCC1-207ENST00000575422 FANCD2Q9BXW9 1451 aa29.9■■■□□ 2.38
ABCC1-207ENST00000575422 URB2Q14146 1524 aaKnown RBP29.64■■■□□ 2.34
ABCC1-207ENST00000575422 CCDC88BA6NC98 1476 aa29.6■■■□□ 2.33
ABCC1-207ENST00000575422 PRDM2Q13029 1718 aa29.54■■■□□ 2.32
ABCC1-207ENST00000575422 OSCARQ8IYS5 282 aa29.45■■■□□ 2.31
ABCC1-207ENST00000575422 TRIM41Q8WV44 630 aa29.4■■■□□ 2.3
ABCC1-207ENST00000575422 IFT140Q96RY7 1462 aa29.36■■■□□ 2.29
ABCC1-207ENST00000575422 ABCC8Q09428 1581 aa29.34■■■□□ 2.29
ABCC1-207ENST00000575422 TOPBP1Q92547 1522 aa29.33■■■□□ 2.29
ABCC1-207ENST00000575422 ZNF608Q9ULD9 1512 aaPredicted RBP29.26■■■□□ 2.27
ABCC1-207ENST00000575422 DNMBPQ6XZF7 1577 aa29.22■■■□□ 2.27
ABCC1-207ENST00000575422 EIF4G3O43432 1585 aaKnown RBP29.08■■■□□ 2.25
ABCC1-207ENST00000575422 TARBP1Q13395 1621 aaKnown RBP29.06■■■□□ 2.24
ABCC1-207ENST00000575422 POLA1P09884 1462 aaPredicted RBP29.03■■■□□ 2.24
ABCC1-207ENST00000575422 AQRO60306 1485 aaKnown RBP eCLIP29.02■■■□□ 2.244e-9■■■■■ 29.2
ABCC1-207ENST00000575422 RIMBP3CA6NJZ7 1639 aa28.97■■■□□ 2.23
ABCC1-207ENST00000575422 RIMBP3BA6NNM3 1639 aa28.97■■■□□ 2.23
ABCC1-207ENST00000575422 RIMBP3Q9UFD9 1639 aa28.97■■■□□ 2.23
ABCC1-207ENST00000575422 SOGA1O94964 1423 aa28.93■■■□□ 2.22
ABCC1-207ENST00000575422 ARHGEF11O15085 1522 aa28.91■■■□□ 2.22
ABCC1-207ENST00000575422 RAD54L2Q9Y4B4 1467 aa28.91■■■□□ 2.22
ABCC1-207ENST00000575422 TDRD9Q8NDG6 1382 aaKnown RBP28.85■■■□□ 2.21
ABCC1-207ENST00000575422 CHD1O14646 1710 aa28.84■■■□□ 2.21
ABCC1-207ENST00000575422 FGD5Q6ZNL6 1462 aa28.84■■■□□ 2.21
ABCC1-207ENST00000575422 FBLN2P98095 1184 aa28.83■■■□□ 2.21
ABCC1-207ENST00000575422 WDR97A6NE52 1622 aa28.81■■■□□ 2.2
ABCC1-207ENST00000575422 CUX1P39880 1505 aa28.81■■■□□ 2.2
ABCC1-207ENST00000575422 CYB5RLQ6IPT4 315 aa28.72■■■□□ 2.19
ABCC1-207ENST00000575422 SUPT5HO00267 1087 aaKnown RBP28.7■■■□□ 2.18
ABCC1-207ENST00000575422 SNAPC4Q5SXM2 1469 aa28.7■■■□□ 2.18
ABCC1-207ENST00000575422 GRIN2BQ13224 1484 aa28.67■■■□□ 2.18
ABCC1-207ENST00000575422 MAGI1Q96QZ7 1491 aaPredicted RBP28.67■■■□□ 2.18
ABCC1-207ENST00000575422 CHMP7Q8WUX9 453 aaPredicted RBP28.65■■■□□ 2.18
ABCC1-207ENST00000575422 ARAP1Q96P48 1450 aa28.61■■■□□ 2.17
ABCC1-207ENST00000575422 SYNJ2O15056 1496 aa28.57■■■□□ 2.16
ABCC1-207ENST00000575422 GAPVD1Q14C86 1478 aa28.57■■■□□ 2.16
ABCC1-207ENST00000575422 CLASP1Q7Z460 1538 aa28.57■■■□□ 2.16
ABCC1-207ENST00000575422 SYNJ1O43426 1573 aa28.56■■■□□ 2.16
ABCC1-207ENST00000575422 ABCA10Q8WWZ4 1543 aa28.54■■■□□ 2.16
ABCC1-207ENST00000575422 PBRM1Q86U86 1689 aa28.48■■■□□ 2.15
ABCC1-207ENST00000575422 ABCA5Q8WWZ7 1642 aa28.46■■■□□ 2.15
ABCC1-207ENST00000575422 WRNQ14191 1432 aaPredicted RBP eCLIP28.43■■■□□ 2.14
ABCC1-207ENST00000575422 TRHP20396 242 aaPredicted RBP28.39■■■□□ 2.14
ABCC1-207ENST00000575422 TOP2BQ02880 1626 aa28.36■■■□□ 2.13
ABCC1-207ENST00000575422 BIVM-ERCC5R4GMW8 1640 aa28.35■■■□□ 2.13
ABCC1-207ENST00000575422 GRIN2AQ12879 1464 aa28.28■■■□□ 2.12
ABCC1-207ENST00000575422 ADAMTS12P58397 1594 aa28.24■■■□□ 2.11
ABCC1-207ENST00000575422 FHAD1B1AJZ9 1412 aa28.22■■■□□ 2.11
ABCC1-207ENST00000575422 NUP160Q12769 1436 aa28.21■■■□□ 2.11
ABCC1-207ENST00000575422 ERICH3Q5RHP9 1530 aa28.18■■■□□ 2.1
ABCC1-207ENST00000575422 CEP170Q5SW79 1584 aa28.15■■■□□ 2.1
ABCC1-207ENST00000575422 ERCC6L2Q5T890 1561 aa28.08■■■□□ 2.09
ABCC1-207ENST00000575422 SHROOM2Q13796 1616 aa28.06■■■□□ 2.08
ABCC1-207ENST00000575422 JPH4Q96JJ6 628 aa27.95■■■□□ 2.06
ABCC1-207ENST00000575422 PRG4Q92954 1404 aaPredicted RBP27.92■■■□□ 2.06
ABCC1-207ENST00000575422 IGF1RP08069 1367 aa27.85■■■□□ 2.05
ABCC1-207ENST00000575422 KIF27Q86VH2 1401 aa27.84■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms