RNA–Protein interactions for RNA: ENST00000300880.11

BBC3-201, Transcript of BCL2 binding component 3, humanhuman

TSL 1 (best) BASIC

Gene BBC3, Length 1,347 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBC3-201ENST00000300880 NISCHQ9Y2I1 1504 aa44.83■■■■■ 4.77
BBC3-201ENST00000300880 ABCC9O60706 1549 aa41.35■■■■■ 4.21
BBC3-201ENST00000300880 CCDC180Q9P1Z9 1646 aa40.56■■■■■ 4.08
BBC3-201ENST00000300880 DNAJC5BQ9UF47 199 aa39.6■■■■□ 3.93
BBC3-201ENST00000300880 RB1CC1Q8TDY2 1594 aa38.93■■■■□ 3.82
BBC3-201ENST00000300880 NACADO15069 1562 aa38.47■■■■□ 3.75
BBC3-201ENST00000300880 PABPN1Q86U42 306 aaKnown RBP eCLIP38.38■■■■□ 3.74
BBC3-201ENST00000300880 UNC13AQ9UPW8 1703 aa38.3■■■■□ 3.72
BBC3-201ENST00000300880 DCAF8L2P0C7V8 631 aa38.12■■■■□ 3.69
BBC3-201ENST00000300880 BICRAQ9NZM4 1560 aa37.99■■■■□ 3.67
BBC3-201ENST00000300880 MYO15BQ96JP2 1530 aa37.66■■■■□ 3.62
BBC3-201ENST00000300880 CC2D2AQ9P2K1 1620 aa37.34■■■■□ 3.57
BBC3-201ENST00000300880 CECR2Q9BXF3 1484 aa37.28■■■■□ 3.56
BBC3-201ENST00000300880 SHROOM4Q9ULL8 1493 aa37.15■■■■□ 3.54
BBC3-201ENST00000300880 EIF4G1Q04637 1599 aaKnown RBP37.03■■■■□ 3.52
BBC3-201ENST00000300880 ZCCHC6Q5VYS8 1495 aaKnown RBP36.98■■■■□ 3.51
BBC3-201ENST00000300880 SCRIBQ14160 1630 aa36.97■■■■□ 3.51
BBC3-201ENST00000300880 DCAF1Q9Y4B6 1507 aa36.92■■■■□ 3.5
BBC3-201ENST00000300880 DNAJC5Q9H3Z4 198 aa36.79■■■■□ 3.48
BBC3-201ENST00000300880 CUX2O14529 1486 aa35.86■■■■□ 3.33
BBC3-201ENST00000300880 ERCC6Q03468 1493 aa35.65■■■■□ 3.3
BBC3-201ENST00000300880 NCAPD3P42695 1498 aa35.55■■■■□ 3.28
BBC3-201ENST00000300880 NESP48681 1621 aa35.36■■■■□ 3.25
BBC3-201ENST00000300880 ATAD2BQ9ULI0 1458 aa35.36■■■■□ 3.25
BBC3-201ENST00000300880 HMGXB3Q12766 1538 aa35.21■■■■□ 3.23
BBC3-201ENST00000300880 SMARCA4P51532 1647 aa35.17■■■■□ 3.22
BBC3-201ENST00000300880 SMARCA2P51531 1590 aa35.16■■■■□ 3.22
BBC3-201ENST00000300880 THOC2Q8NI27 1593 aaKnown RBP35.14■■■■□ 3.22
BBC3-201ENST00000300880 BAZ1BQ9UIG0 1483 aaKnown RBP34.94■■■■□ 3.18
BBC3-201ENST00000300880 KIF21AQ7Z4S6 1674 aa34.91■■■■□ 3.18
BBC3-201ENST00000300880 LAMC3Q9Y6N6 1575 aa34.87■■■■□ 3.17
BBC3-201ENST00000300880 TRIM41Q8WV44 630 aa34.84■■■■□ 3.17
BBC3-201ENST00000300880 PEG3Q9GZU2 1588 aa34.8■■■■□ 3.16
BBC3-201ENST00000300880 BAZ1AQ9NRL2 1556 aaPredicted RBP34.79■■■■□ 3.16
BBC3-201ENST00000300880 PDS5BQ9NTI5 1447 aa34.63■■■■□ 3.13
BBC3-201ENST00000300880 MROH2BQ7Z745 1585 aa34.59■■■■□ 3.13
BBC3-201ENST00000300880 MRC2Q9UBG0 1479 aa34.44■■■■□ 3.1
BBC3-201ENST00000300880 WDR62O43379 1518 aa34.42■■■■□ 3.1
BBC3-201ENST00000300880 CADPSQ9ULU8 1353 aa34.42■■■■□ 3.1
BBC3-201ENST00000300880 WIZO95785 1651 aa34.18■■■■□ 3.06
BBC3-201ENST00000300880 CEP164Q9UPV0 1460 aa34.13■■■■□ 3.05
BBC3-201ENST00000300880 OSCARQ8IYS5 282 aa34.07■■■■□ 3.05
BBC3-201ENST00000300880 FANCD2Q9BXW9 1451 aa34.05■■■■□ 3.04
BBC3-201ENST00000300880 URB2Q14146 1524 aaKnown RBP33.89■■■■□ 3.02
BBC3-201ENST00000300880 CFTRP13569 1480 aa33.89■■■■□ 3.02
BBC3-201ENST00000300880 RIMBP3CA6NJZ7 1639 aa33.87■■■■□ 3.01
BBC3-201ENST00000300880 RIMBP3BA6NNM3 1639 aa33.87■■■■□ 3.01
BBC3-201ENST00000300880 RIMBP3Q9UFD9 1639 aa33.87■■■■□ 3.01
BBC3-201ENST00000300880 ARHGEF11O15085 1522 aa33.62■■■□□ 2.97
BBC3-201ENST00000300880 ZNF608Q9ULD9 1512 aaPredicted RBP33.62■■■□□ 2.97
BBC3-201ENST00000300880 PRDM2Q13029 1718 aa33.58■■■□□ 2.97
BBC3-201ENST00000300880 TOP2AP11388 1531 aaKnown RBP33.58■■■□□ 2.97
BBC3-201ENST00000300880 RSF1Q96T23 1441 aaPredicted RBP33.54■■■□□ 2.96
BBC3-201ENST00000300880 IFT140Q96RY7 1462 aa33.46■■■□□ 2.95
BBC3-201ENST00000300880 CYB5RLQ6IPT4 315 aa33.39■■■□□ 2.94
BBC3-201ENST00000300880 EIF4G3O43432 1585 aaKnown RBP33.36■■■□□ 2.93
BBC3-201ENST00000300880 TOPBP1Q92547 1522 aa33.36■■■□□ 2.93
BBC3-201ENST00000300880 CHD1O14646 1710 aa33.34■■■□□ 2.93
BBC3-201ENST00000300880 ARAP1Q96P48 1450 aa33.27■■■□□ 2.92
BBC3-201ENST00000300880 CCDC88BA6NC98 1476 aa33.25■■■□□ 2.91
BBC3-201ENST00000300880 TRHP20396 242 aaPredicted RBP33.22■■■□□ 2.91
BBC3-201ENST00000300880 AQRO60306 1485 aaKnown RBP eCLIP33.18■■■□□ 2.92e-8■■■□□ 18.9
BBC3-201ENST00000300880 TARBP1Q13395 1621 aaKnown RBP33.17■■■□□ 2.9
BBC3-201ENST00000300880 DNMBPQ6XZF7 1577 aa33.14■■■□□ 2.9
BBC3-201ENST00000300880 ABCC8Q09428 1581 aa33.09■■■□□ 2.89
BBC3-201ENST00000300880 FBLN2P98095 1184 aa33.02■■■□□ 2.88
BBC3-201ENST00000300880 POLA1P09884 1462 aaPredicted RBP32.96■■■□□ 2.87
BBC3-201ENST00000300880 RAD54L2Q9Y4B4 1467 aa32.9■■■□□ 2.86
BBC3-201ENST00000300880 CLASP1Q7Z460 1538 aa32.86■■■□□ 2.85
BBC3-201ENST00000300880 TDRD9Q8NDG6 1382 aaKnown RBP32.84■■■□□ 2.85
BBC3-201ENST00000300880 SNAPC4Q5SXM2 1469 aa32.79■■■□□ 2.84
BBC3-201ENST00000300880 AEBP2Q6ZN18 517 aaPredicted RBP32.76■■■□□ 2.83
BBC3-201ENST00000300880 SOGA1O94964 1423 aa32.75■■■□□ 2.83
BBC3-201ENST00000300880 SYNJ1O43426 1573 aa32.69■■■□□ 2.82
BBC3-201ENST00000300880 FGD5Q6ZNL6 1462 aa32.64■■■□□ 2.82
BBC3-201ENST00000300880 WDR97A6NE52 1622 aa32.63■■■□□ 2.81
BBC3-201ENST00000300880 CHMP7Q8WUX9 453 aaPredicted RBP32.63■■■□□ 2.81
BBC3-201ENST00000300880 MAGI1Q96QZ7 1491 aaPredicted RBP32.61■■■□□ 2.81
BBC3-201ENST00000300880 GRIN2BQ13224 1484 aa32.54■■■□□ 2.8
BBC3-201ENST00000300880 CUX1P39880 1505 aa32.53■■■□□ 2.8
BBC3-201ENST00000300880 SYNJ2O15056 1496 aa32.53■■■□□ 2.8
BBC3-201ENST00000300880 GAPVD1Q14C86 1478 aa32.51■■■□□ 2.79
BBC3-201ENST00000300880 PBRM1Q86U86 1689 aa32.49■■■□□ 2.79
BBC3-201ENST00000300880 ERCC6L2Q5T890 1561 aa32.4■■■□□ 2.78
BBC3-201ENST00000300880 ABCA5Q8WWZ7 1642 aa32.28■■■□□ 2.76
BBC3-201ENST00000300880 ABCA10Q8WWZ4 1543 aa32.2■■■□□ 2.74
BBC3-201ENST00000300880 KIF13AQ9H1H9 1805 aa32.18■■■□□ 2.74
BBC3-201ENST00000300880 CEP170Q5SW79 1584 aa32.17■■■□□ 2.74
BBC3-201ENST00000300880 GRIN2AQ12879 1464 aa32.15■■■□□ 2.74
BBC3-201ENST00000300880 SHROOM2Q13796 1616 aa32.09■■■□□ 2.73
BBC3-201ENST00000300880 NUP160Q12769 1436 aa32.08■■■□□ 2.73
BBC3-201ENST00000300880 ADAMTS12P58397 1594 aa32.08■■■□□ 2.73
BBC3-201ENST00000300880 FHAD1B1AJZ9 1412 aa31.87■■■□□ 2.69
BBC3-201ENST00000300880 WRNQ14191 1432 aaPredicted RBP eCLIP31.85■■■□□ 2.695e-6■■■■■ 46
BBC3-201ENST00000300880 PRG4Q92954 1404 aaPredicted RBP31.82■■■□□ 2.68
BBC3-201ENST00000300880 BIVM-ERCC5R4GMW8 1640 aa31.8■■■□□ 2.68
BBC3-201ENST00000300880 TOP2BQ02880 1626 aa31.76■■■□□ 2.68
BBC3-201ENST00000300880 ABCC10Q5T3U5 1492 aa31.76■■■□□ 2.67
BBC3-201ENST00000300880 ERICH3Q5RHP9 1530 aa31.75■■■□□ 2.67
BBC3-201ENST00000300880 FAM69CQ0P6D2 419 aa31.75■■■□□ 2.67
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms