RNA–Protein interactions for RNA: ENST00000620242.1

SRSF3-206, Transcript of serine and arginine rich splicing factor 3, humanhuman

TSL 2

Gene SRSF3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF3-206ENST00000620242 NISCHQ9Y2I1 1504 aa30.9■■■□□ 2.54
SRSF3-206ENST00000620242 CCDC180Q9P1Z9 1646 aa27.44■■□□□ 1.98
SRSF3-206ENST00000620242 ABCC9O60706 1549 aa26.59■■□□□ 1.85
SRSF3-206ENST00000620242 NACADO15069 1562 aa25.81■■□□□ 1.72
SRSF3-206ENST00000620242 RB1CC1Q8TDY2 1594 aa25.78■■□□□ 1.72
SRSF3-206ENST00000620242 DCAF8L2P0C7V8 631 aa25.76■■□□□ 1.71
SRSF3-206ENST00000620242 ZCCHC6Q5VYS8 1495 aaKnown RBP25.76■■□□□ 1.71
SRSF3-206ENST00000620242 MYO15BQ96JP2 1530 aa25.75■■□□□ 1.71
SRSF3-206ENST00000620242 DCAF1Q9Y4B6 1507 aa25.67■■□□□ 1.7
SRSF3-206ENST00000620242 UNC13AQ9UPW8 1703 aa24.98■■□□□ 1.59
SRSF3-206ENST00000620242 SCRIBQ14160 1630 aa24.93■■□□□ 1.58
SRSF3-206ENST00000620242 SHROOM4Q9ULL8 1493 aa24.86■■□□□ 1.57
SRSF3-206ENST00000620242 PABPN1Q86U42 306 aaKnown RBP eCLIP24.86■■□□□ 1.57
SRSF3-206ENST00000620242 BICRAQ9NZM4 1560 aa24.83■■□□□ 1.57
SRSF3-206ENST00000620242 EIF4G1Q04637 1599 aaKnown RBP24.24■■□□□ 1.47
SRSF3-206ENST00000620242 DNAJC5BQ9UF47 199 aa24.17■■□□□ 1.46
SRSF3-206ENST00000620242 CC2D2AQ9P2K1 1620 aa24.07■■□□□ 1.44
SRSF3-206ENST00000620242 BAZ1AQ9NRL2 1556 aaPredicted RBP23.99■■□□□ 1.43
SRSF3-206ENST00000620242 CECR2Q9BXF3 1484 aa23.94■■□□□ 1.42
SRSF3-206ENST00000620242 SMARCA4P51532 1647 aa23.92■■□□□ 1.42
SRSF3-206ENST00000620242 SMARCA2P51531 1590 aa23.83■■□□□ 1.41
SRSF3-206ENST00000620242 NCAPD3P42695 1498 aa23.78■■□□□ 1.4
SRSF3-206ENST00000620242 ATAD2BQ9ULI0 1458 aa23.77■■□□□ 1.4
SRSF3-206ENST00000620242 MROH2BQ7Z745 1585 aa23.74■■□□□ 1.39
SRSF3-206ENST00000620242 PEG3Q9GZU2 1588 aa23.74■■□□□ 1.39
SRSF3-206ENST00000620242 HMGXB3Q12766 1538 aa23.69■■□□□ 1.38
SRSF3-206ENST00000620242 BAZ1BQ9UIG0 1483 aaKnown RBP23.62■■□□□ 1.37
SRSF3-206ENST00000620242 RSF1Q96T23 1441 aaPredicted RBP23.58■■□□□ 1.36
SRSF3-206ENST00000620242 WIZO95785 1651 aa23.46■■□□□ 1.35
SRSF3-206ENST00000620242 TOP2AP11388 1531 aaKnown RBP23.33■■□□□ 1.33
SRSF3-206ENST00000620242 LAMC3Q9Y6N6 1575 aa23.14■■□□□ 1.3
SRSF3-206ENST00000620242 CADPSQ9ULU8 1353 aa23.11■■□□□ 1.29
SRSF3-206ENST00000620242 SUPT5HO00267 1087 aaKnown RBP23.1■■□□□ 1.29
SRSF3-206ENST00000620242 PDS5BQ9NTI5 1447 aa23.04■■□□□ 1.28
SRSF3-206ENST00000620242 ERCC6Q03468 1493 aa23.03■■□□□ 1.28
SRSF3-206ENST00000620242 CCDC88BA6NC98 1476 aa23.02■■□□□ 1.28
SRSF3-206ENST00000620242 NESP48681 1621 aa23■■□□□ 1.27
SRSF3-206ENST00000620242 CFTRP13569 1480 aa22.98■■□□□ 1.27
SRSF3-206ENST00000620242 FANCD2Q9BXW9 1451 aa22.8■■□□□ 1.24
SRSF3-206ENST00000620242 CEP164Q9UPV0 1460 aa22.79■■□□□ 1.24
SRSF3-206ENST00000620242 PRDM2Q13029 1718 aa22.77■■□□□ 1.24
SRSF3-206ENST00000620242 CUX2O14529 1486 aa22.76■■□□□ 1.23
SRSF3-206ENST00000620242 KIF21AQ7Z4S6 1674 aa22.74■■□□□ 1.23
SRSF3-206ENST00000620242 MRC2Q9UBG0 1479 aa22.71■■□□□ 1.23
SRSF3-206ENST00000620242 THOC2Q8NI27 1593 aaKnown RBP22.67■■□□□ 1.22
SRSF3-206ENST00000620242 ABCC8Q09428 1581 aa22.61■■□□□ 1.21
SRSF3-206ENST00000620242 WDR62O43379 1518 aa22.6■■□□□ 1.21
SRSF3-206ENST00000620242 URB2Q14146 1524 aaKnown RBP22.49■■□□□ 1.19
SRSF3-206ENST00000620242 DNMBPQ6XZF7 1577 aa22.45■■□□□ 1.18
SRSF3-206ENST00000620242 TOPBP1Q92547 1522 aa22.43■■□□□ 1.18
SRSF3-206ENST00000620242 DNAJC5Q9H3Z4 198 aa22.35■■□□□ 1.17
SRSF3-206ENST00000620242 IFT140Q96RY7 1462 aa22.33■■□□□ 1.16
SRSF3-206ENST00000620242 WRNQ14191 1432 aaPredicted RBP eCLIP22.28■■□□□ 1.16
SRSF3-206ENST00000620242 CUX1P39880 1505 aa22.26■■□□□ 1.15
SRSF3-206ENST00000620242 POLA1P09884 1462 aaPredicted RBP22.25■■□□□ 1.15
SRSF3-206ENST00000620242 SOGA1O94964 1423 aa22.22■■□□□ 1.15
SRSF3-206ENST00000620242 FGD5Q6ZNL6 1462 aa22.21■■□□□ 1.15
SRSF3-206ENST00000620242 TOP2BQ02880 1626 aa22.18■■□□□ 1.14
SRSF3-206ENST00000620242 BIVM-ERCC5R4GMW8 1640 aa22.16■■□□□ 1.14
SRSF3-206ENST00000620242 WDR97A6NE52 1622 aa22.15■■□□□ 1.14
SRSF3-206ENST00000620242 TARBP1Q13395 1621 aaKnown RBP22.13■■□□□ 1.13
SRSF3-206ENST00000620242 SYNJ1O43426 1573 aa22.09■■□□□ 1.13
SRSF3-206ENST00000620242 RAD54L2Q9Y4B4 1467 aa22.09■■□□□ 1.13
SRSF3-206ENST00000620242 ABCA10Q8WWZ4 1543 aa22.06■■□□□ 1.12
SRSF3-206ENST00000620242 ZNF608Q9ULD9 1512 aaPredicted RBP22.06■■□□□ 1.12
SRSF3-206ENST00000620242 EIF4G3O43432 1585 aaKnown RBP22.02■■□□□ 1.12
SRSF3-206ENST00000620242 AQRO60306 1485 aaKnown RBP eCLIP22■■□□□ 1.114e-8■■□□□ 14.4
SRSF3-206ENST00000620242 TDRD9Q8NDG6 1382 aaKnown RBP21.99■■□□□ 1.11
SRSF3-206ENST00000620242 GRIN2BQ13224 1484 aa21.96■■□□□ 1.11
SRSF3-206ENST00000620242 GAPVD1Q14C86 1478 aa21.96■■□□□ 1.11
SRSF3-206ENST00000620242 TRIM41Q8WV44 630 aa21.91■■□□□ 1.1
SRSF3-206ENST00000620242 MAGI1Q96QZ7 1491 aaPredicted RBP21.9■■□□□ 1.1
SRSF3-206ENST00000620242 ABCA5Q8WWZ7 1642 aa21.89■■□□□ 1.09
SRSF3-206ENST00000620242 OSCARQ8IYS5 282 aa21.86■■□□□ 1.09
SRSF3-206ENST00000620242 KIF27Q86VH2 1401 aa21.86■■□□□ 1.09
SRSF3-206ENST00000620242 ERICH3Q5RHP9 1530 aa21.83■■□□□ 1.09
SRSF3-206ENST00000620242 SNAPC4Q5SXM2 1469 aa21.83■■□□□ 1.08
SRSF3-206ENST00000620242 CHMP7Q8WUX9 453 aaPredicted RBP21.81■■□□□ 1.08
SRSF3-206ENST00000620242 PBRM1Q86U86 1689 aa21.81■■□□□ 1.08
SRSF3-206ENST00000620242 FBLN2P98095 1184 aa21.79■■□□□ 1.08
SRSF3-206ENST00000620242 SYNJ2O15056 1496 aa21.78■■□□□ 1.08
SRSF3-206ENST00000620242 FHAD1B1AJZ9 1412 aa21.74■■□□□ 1.07
SRSF3-206ENST00000620242 CHD1O14646 1710 aa21.67■■□□□ 1.06
SRSF3-206ENST00000620242 ADAMTS12P58397 1594 aa21.67■■□□□ 1.06
SRSF3-206ENST00000620242 IGF1RP08069 1367 aa21.67■■□□□ 1.06
SRSF3-206ENST00000620242 CHIC1Q5VXU3 224 aa21.65■■□□□ 1.06
SRSF3-206ENST00000620242 CUL7Q14999 1698 aa21.65■■□□□ 1.06
SRSF3-206ENST00000620242 GRIN2AQ12879 1464 aa21.63■■□□□ 1.05
SRSF3-206ENST00000620242 EEA1Q15075 1411 aa21.62■■□□□ 1.05
SRSF3-206ENST00000620242 CARMIL1Q5VZK9 1371 aa21.59■■□□□ 1.05
SRSF3-206ENST00000620242 NUP160Q12769 1436 aa21.54■■□□□ 1.04
SRSF3-206ENST00000620242 CLASP1Q7Z460 1538 aa21.5■■□□□ 1.03
SRSF3-206ENST00000620242 RAPGEF2Q9Y4G8 1499 aa21.49■■□□□ 1.03
SRSF3-206ENST00000620242 CSRNP3Q8WYN3 585 aa21.48■■□□□ 1.03
SRSF3-206ENST00000620242 RUSC2Q8N2Y8 1516 aa21.48■■□□□ 1.03
SRSF3-206ENST00000620242 CEP170Q5SW79 1584 aa21.44■■□□□ 1.02
SRSF3-206ENST00000620242 KIAA0586Q9BVV6 1533 aa21.41■■□□□ 1.02
SRSF3-206ENST00000620242 PRXQ9BXM0 1461 aa21.4■■□□□ 1.02
SRSF3-206ENST00000620242 ARHGEF11O15085 1522 aa21.39■■□□□ 1.02
SRSF3-206ENST00000620242 JPH4Q96JJ6 628 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms