RNA–Protein interactions for RNA: ENST00000375779.6

CLIC1-206, Transcript of chloride intracellular channel 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIC1, Length 1,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1-206ENST00000375779 NISCHQ9Y2I1 1504 aa36.67■■■■□ 3.46
CLIC1-206ENST00000375779 CCDC180Q9P1Z9 1646 aa32.77■■■□□ 2.84
CLIC1-206ENST00000375779 ABCC9O60706 1549 aa32.51■■■□□ 2.8
CLIC1-206ENST00000375779 RB1CC1Q8TDY2 1594 aa31.09■■■□□ 2.57
CLIC1-206ENST00000375779 NACADO15069 1562 aa30.99■■■□□ 2.55
CLIC1-206ENST00000375779 MYO15BQ96JP2 1530 aa30.76■■■□□ 2.51
CLIC1-206ENST00000375779 DCAF8L2P0C7V8 631 aa30.67■■■□□ 2.5
CLIC1-206ENST00000375779 DNAJC5BQ9UF47 199 aa30.55■■■□□ 2.48
CLIC1-206ENST00000375779 ZCCHC6Q5VYS8 1495 aaKnown RBP30.41■■■□□ 2.46
CLIC1-206ENST00000375779 DCAF1Q9Y4B6 1507 aa30.39■■■□□ 2.46
CLIC1-206ENST00000375779 UNC13AQ9UPW8 1703 aa30.39■■■□□ 2.45
CLIC1-206ENST00000375779 PABPN1Q86U42 306 aaKnown RBP eCLIP30.33■■■□□ 2.45
CLIC1-206ENST00000375779 BICRAQ9NZM4 1560 aa30.27■■■□□ 2.44
CLIC1-206ENST00000375779 SHROOM4Q9ULL8 1493 aa29.9■■■□□ 2.38
CLIC1-206ENST00000375779 SCRIBQ14160 1630 aa29.73■■■□□ 2.35
CLIC1-206ENST00000375779 EIF4G1Q04637 1599 aaKnown RBP29.43■■■□□ 2.3
CLIC1-206ENST00000375779 CC2D2AQ9P2K1 1620 aa29.43■■■□□ 2.3
CLIC1-206ENST00000375779 CECR2Q9BXF3 1484 aa29.31■■■□□ 2.28
CLIC1-206ENST00000375779 AEBP2Q6ZN18 517 aaPredicted RBP28.71■■■□□ 2.19
CLIC1-206ENST00000375779 NCAPD3P42695 1498 aa28.69■■■□□ 2.18
CLIC1-206ENST00000375779 ATAD2BQ9ULI0 1458 aa28.55■■■□□ 2.16
CLIC1-206ENST00000375779 SMARCA4P51532 1647 aa28.5■■■□□ 2.15
CLIC1-206ENST00000375779 SMARCA2P51531 1590 aa28.44■■■□□ 2.14
CLIC1-206ENST00000375779 HMGXB3Q12766 1538 aa28.4■■■□□ 2.14
CLIC1-206ENST00000375779 BAZ1AQ9NRL2 1556 aaPredicted RBP28.4■■■□□ 2.14
CLIC1-206ENST00000375779 PEG3Q9GZU2 1588 aa28.35■■■□□ 2.13
CLIC1-206ENST00000375779 MROH2BQ7Z745 1585 aa28.22■■■□□ 2.11
CLIC1-206ENST00000375779 BAZ1BQ9UIG0 1483 aaKnown RBP28.18■■■□□ 2.1
CLIC1-206ENST00000375779 CUX2O14529 1486 aa28.05■■■□□ 2.08
CLIC1-206ENST00000375779 NESP48681 1621 aa28.02■■■□□ 2.08
CLIC1-206ENST00000375779 ERCC6Q03468 1493 aa28■■■□□ 2.07
CLIC1-206ENST00000375779 DNAJC5Q9H3Z4 198 aa27.93■■■□□ 2.06
CLIC1-206ENST00000375779 LAMC3Q9Y6N6 1575 aa27.9■■■□□ 2.06
CLIC1-206ENST00000375779 WIZO95785 1651 aa27.82■■■□□ 2.04
CLIC1-206ENST00000375779 CADPSQ9ULU8 1353 aa27.77■■■□□ 2.04
CLIC1-206ENST00000375779 RSF1Q96T23 1441 aaPredicted RBP27.75■■■□□ 2.03
CLIC1-206ENST00000375779 PDS5BQ9NTI5 1447 aa27.74■■■□□ 2.03
CLIC1-206ENST00000375779 THOC2Q8NI27 1593 aaKnown RBP27.71■■■□□ 2.03
CLIC1-206ENST00000375779 KIF21AQ7Z4S6 1674 aa27.62■■■□□ 2.01
CLIC1-206ENST00000375779 TOP2AP11388 1531 aaKnown RBP27.51■■■□□ 2
CLIC1-206ENST00000375779 CFTRP13569 1480 aa27.51■■□□□ 1.99
CLIC1-206ENST00000375779 MRC2Q9UBG0 1479 aa27.44■■□□□ 1.98
CLIC1-206ENST00000375779 WDR62O43379 1518 aa27.41■■□□□ 1.98
CLIC1-206ENST00000375779 FANCD2Q9BXW9 1451 aa27.37■■□□□ 1.97
CLIC1-206ENST00000375779 CEP164Q9UPV0 1460 aa27.34■■□□□ 1.97
CLIC1-206ENST00000375779 CHIC1Q5VXU3 224 aa27.28■■□□□ 1.96
CLIC1-206ENST00000375779 CCDC88BA6NC98 1476 aa27.25■■□□□ 1.95
CLIC1-206ENST00000375779 URB2Q14146 1524 aaKnown RBP27.16■■□□□ 1.94
CLIC1-206ENST00000375779 PRDM2Q13029 1718 aa27.11■■□□□ 1.93
CLIC1-206ENST00000375779 ABCC8Q09428 1581 aa26.9■■□□□ 1.9
CLIC1-206ENST00000375779 TOPBP1Q92547 1522 aa26.89■■□□□ 1.89
CLIC1-206ENST00000375779 IFT140Q96RY7 1462 aa26.85■■□□□ 1.89
CLIC1-206ENST00000375779 OSCARQ8IYS5 282 aa26.82■■□□□ 1.88
CLIC1-206ENST00000375779 DNMBPQ6XZF7 1577 aa26.78■■□□□ 1.88
CLIC1-206ENST00000375779 ZNF608Q9ULD9 1512 aaPredicted RBP26.77■■□□□ 1.88
CLIC1-206ENST00000375779 TARBP1Q13395 1621 aaKnown RBP26.67■■□□□ 1.86
CLIC1-206ENST00000375779 POLA1P09884 1462 aaPredicted RBP26.62■■□□□ 1.85
CLIC1-206ENST00000375779 AQRO60306 1485 aaKnown RBP eCLIP26.56■■□□□ 1.841e-9■■■■■ 31.5
CLIC1-206ENST00000375779 EIF4G3O43432 1585 aaKnown RBP26.56■■□□□ 1.84
CLIC1-206ENST00000375779 SOGA1O94964 1423 aa26.52■■□□□ 1.84
CLIC1-206ENST00000375779 TRIM41Q8WV44 630 aa26.5■■□□□ 1.83
CLIC1-206ENST00000375779 RAD54L2Q9Y4B4 1467 aa26.49■■□□□ 1.83
CLIC1-206ENST00000375779 CUX1P39880 1505 aa26.49■■□□□ 1.83
CLIC1-206ENST00000375779 SUPT5HO00267 1087 aaKnown RBP26.47■■□□□ 1.83
CLIC1-206ENST00000375779 FGD5Q6ZNL6 1462 aa26.44■■□□□ 1.82
CLIC1-206ENST00000375779 WDR97A6NE52 1622 aa26.42■■□□□ 1.82
CLIC1-206ENST00000375779 TDRD9Q8NDG6 1382 aaKnown RBP26.42■■□□□ 1.82
CLIC1-206ENST00000375779 RIMBP3CA6NJZ7 1639 aa26.36■■□□□ 1.81
CLIC1-206ENST00000375779 RIMBP3BA6NNM3 1639 aa26.36■■□□□ 1.81
CLIC1-206ENST00000375779 RIMBP3Q9UFD9 1639 aa26.36■■□□□ 1.81
CLIC1-206ENST00000375779 CHD1O14646 1710 aa26.31■■□□□ 1.8
CLIC1-206ENST00000375779 ARHGEF11O15085 1522 aa26.31■■□□□ 1.8
CLIC1-206ENST00000375779 GRIN2BQ13224 1484 aa26.25■■□□□ 1.79
CLIC1-206ENST00000375779 MAGI1Q96QZ7 1491 aaPredicted RBP26.25■■□□□ 1.79
CLIC1-206ENST00000375779 ABCA10Q8WWZ4 1543 aa26.24■■□□□ 1.79
CLIC1-206ENST00000375779 FBLN2P98095 1184 aa26.23■■□□□ 1.79
CLIC1-206ENST00000375779 SNAPC4Q5SXM2 1469 aa26.23■■□□□ 1.79
CLIC1-206ENST00000375779 GAPVD1Q14C86 1478 aa26.18■■□□□ 1.78
CLIC1-206ENST00000375779 CHMP7Q8WUX9 453 aaPredicted RBP26.16■■□□□ 1.78
CLIC1-206ENST00000375779 SYNJ2O15056 1496 aa26.15■■□□□ 1.78
CLIC1-206ENST00000375779 ABCA5Q8WWZ7 1642 aa26.13■■□□□ 1.77
CLIC1-206ENST00000375779 CLASP1Q7Z460 1538 aa26.13■■□□□ 1.77
CLIC1-206ENST00000375779 WRNQ14191 1432 aaPredicted RBP eCLIP26.13■■□□□ 1.779e-8■□□□□ 9
CLIC1-206ENST00000375779 TOP2BQ02880 1626 aa26.11■■□□□ 1.77
CLIC1-206ENST00000375779 CYB5RLQ6IPT4 315 aa26.11■■□□□ 1.77
CLIC1-206ENST00000375779 BIVM-ERCC5R4GMW8 1640 aa26.1■■□□□ 1.77
CLIC1-206ENST00000375779 ARAP1Q96P48 1450 aa26.08■■□□□ 1.77
CLIC1-206ENST00000375779 PBRM1Q86U86 1689 aa26.06■■□□□ 1.76
CLIC1-206ENST00000375779 SYNJ1O43426 1573 aa26.05■■□□□ 1.76
CLIC1-206ENST00000375779 GRIN2AQ12879 1464 aa25.91■■□□□ 1.74
CLIC1-206ENST00000375779 ERICH3Q5RHP9 1530 aa25.89■■□□□ 1.74
CLIC1-206ENST00000375779 FHAD1B1AJZ9 1412 aa25.88■■□□□ 1.73
CLIC1-206ENST00000375779 NUP160Q12769 1436 aa25.88■■□□□ 1.73
CLIC1-206ENST00000375779 ADAMTS12P58397 1594 aa25.86■■□□□ 1.73
CLIC1-206ENST00000375779 CEP170Q5SW79 1584 aa25.78■■□□□ 1.72
CLIC1-206ENST00000375779 SHROOM2Q13796 1616 aa25.73■■□□□ 1.71
CLIC1-206ENST00000375779 ERCC6L2Q5T890 1561 aa25.69■■□□□ 1.7
CLIC1-206ENST00000375779 IGF1RP08069 1367 aa25.69■■□□□ 1.7
CLIC1-206ENST00000375779 TRHP20396 242 aaPredicted RBP25.65■■□□□ 1.7
CLIC1-206ENST00000375779 JPH4Q96JJ6 628 aa25.63■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms