RNA–Protein interactions for RNA: ENST00000341983.8

BBC3-202, Transcript of BCL2 binding component 3, humanhuman

TSL 1 (best) BASIC

Gene BBC3, Length 1,538 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBC3-202ENST00000341983 NISCHQ9Y2I1 1504 aa52.83■■■■■ 6.05
BBC3-202ENST00000341983 CCDC180Q9P1Z9 1646 aa46.9■■■■■ 5.1
BBC3-202ENST00000341983 ABCC9O60706 1549 aa45.69■■■■■ 4.91
BBC3-202ENST00000341983 ZCCHC6Q5VYS8 1495 aaKnown RBP44.07■■■■■ 4.65
BBC3-202ENST00000341983 RB1CC1Q8TDY2 1594 aa44.01■■■■■ 4.64
BBC3-202ENST00000341983 NACADO15069 1562 aa44■■■■■ 4.63
BBC3-202ENST00000341983 DCAF8L2P0C7V8 631 aa43.95■■■■■ 4.63
BBC3-202ENST00000341983 MYO15BQ96JP2 1530 aa43.79■■■■■ 4.6
BBC3-202ENST00000341983 DCAF1Q9Y4B6 1507 aa43.69■■■■■ 4.59
BBC3-202ENST00000341983 UNC13AQ9UPW8 1703 aa43.18■■■■■ 4.5
BBC3-202ENST00000341983 SCRIBQ14160 1630 aa42.85■■■■■ 4.45
BBC3-202ENST00000341983 BICRAQ9NZM4 1560 aa42.77■■■■■ 4.44
BBC3-202ENST00000341983 PABPN1Q86U42 306 aaKnown RBP eCLIP42.71■■■■■ 4.43
BBC3-202ENST00000341983 SHROOM4Q9ULL8 1493 aa42.2■■■■■ 4.35
BBC3-202ENST00000341983 DNAJC5BQ9UF47 199 aa41.79■■■■■ 4.28
BBC3-202ENST00000341983 EIF4G1Q04637 1599 aaKnown RBP41.58■■■■■ 4.25
BBC3-202ENST00000341983 CC2D2AQ9P2K1 1620 aa41.37■■■■■ 4.21
BBC3-202ENST00000341983 CECR2Q9BXF3 1484 aa41.18■■■■■ 4.18
BBC3-202ENST00000341983 SMARCA4P51532 1647 aa40.99■■■■■ 4.15
BBC3-202ENST00000341983 BAZ1AQ9NRL2 1556 aaPredicted RBP40.91■■■■■ 4.14
BBC3-202ENST00000341983 MROH2BQ7Z745 1585 aa40.76■■■■■ 4.12
BBC3-202ENST00000341983 ATAD2BQ9ULI0 1458 aa40.67■■■■■ 4.1
BBC3-202ENST00000341983 SMARCA2P51531 1590 aa40.6■■■■■ 4.09
BBC3-202ENST00000341983 NCAPD3P42695 1498 aa40.59■■■■■ 4.09
BBC3-202ENST00000341983 PEG3Q9GZU2 1588 aa40.57■■■■■ 4.08
BBC3-202ENST00000341983 HMGXB3Q12766 1538 aa40.44■■■■■ 4.07
BBC3-202ENST00000341983 WIZO95785 1651 aa40.35■■■■■ 4.05
BBC3-202ENST00000341983 BAZ1BQ9UIG0 1483 aaKnown RBP40.33■■■■■ 4.05
BBC3-202ENST00000341983 RSF1Q96T23 1441 aaPredicted RBP40.33■■■■■ 4.05
BBC3-202ENST00000341983 TOP2AP11388 1531 aaKnown RBP39.89■■■■□ 3.98
BBC3-202ENST00000341983 NESP48681 1621 aa39.64■■■■□ 3.94
BBC3-202ENST00000341983 LAMC3Q9Y6N6 1575 aa39.51■■■■□ 3.91
BBC3-202ENST00000341983 CCDC88BA6NC98 1476 aa39.42■■■■□ 3.9
BBC3-202ENST00000341983 CADPSQ9ULU8 1353 aa39.41■■■■□ 3.9
BBC3-202ENST00000341983 SUPT5HO00267 1087 aaKnown RBP39.4■■■■□ 3.9
BBC3-202ENST00000341983 ERCC6Q03468 1493 aa39.31■■■■□ 3.88
BBC3-202ENST00000341983 CFTRP13569 1480 aa39.25■■■■□ 3.87
BBC3-202ENST00000341983 KIF21AQ7Z4S6 1674 aa39.22■■■■□ 3.87
BBC3-202ENST00000341983 PDS5BQ9NTI5 1447 aa39.17■■■■□ 3.86
BBC3-202ENST00000341983 PRDM2Q13029 1718 aa39.06■■■■□ 3.84
BBC3-202ENST00000341983 THOC2Q8NI27 1593 aaKnown RBP39.02■■■■□ 3.84
BBC3-202ENST00000341983 FANCD2Q9BXW9 1451 aa38.99■■■■□ 3.83
BBC3-202ENST00000341983 CEP164Q9UPV0 1460 aa38.9■■■■□ 3.82
BBC3-202ENST00000341983 CUX2O14529 1486 aa38.82■■■■□ 3.81
BBC3-202ENST00000341983 MRC2Q9UBG0 1479 aa38.82■■■■□ 3.8
BBC3-202ENST00000341983 WDR62O43379 1518 aa38.72■■■■□ 3.79
BBC3-202ENST00000341983 URB2Q14146 1524 aaKnown RBP38.63■■■■□ 3.78
BBC3-202ENST00000341983 TOPBP1Q92547 1522 aa38.41■■■■□ 3.74
BBC3-202ENST00000341983 DNMBPQ6XZF7 1577 aa38.38■■■■□ 3.73
BBC3-202ENST00000341983 ABCC8Q09428 1581 aa38.31■■■■□ 3.72
BBC3-202ENST00000341983 CUX1P39880 1505 aa38.22■■■■□ 3.71
BBC3-202ENST00000341983 POLA1P09884 1462 aaPredicted RBP38.1■■■■□ 3.69
BBC3-202ENST00000341983 IFT140Q96RY7 1462 aa38.07■■■■□ 3.69
BBC3-202ENST00000341983 FGD5Q6ZNL6 1462 aa38.04■■■■□ 3.68
BBC3-202ENST00000341983 TARBP1Q13395 1621 aaKnown RBP38.02■■■■□ 3.68
BBC3-202ENST00000341983 SYNJ1O43426 1573 aa37.98■■■■□ 3.67
BBC3-202ENST00000341983 WRNQ14191 1432 aaPredicted RBP eCLIP37.98■■■■□ 3.675e-6■■■■■ 46
BBC3-202ENST00000341983 ZNF608Q9ULD9 1512 aaPredicted RBP37.96■■■■□ 3.67
BBC3-202ENST00000341983 BIVM-ERCC5R4GMW8 1640 aa37.95■■■■□ 3.67
BBC3-202ENST00000341983 RAD54L2Q9Y4B4 1467 aa37.94■■■■□ 3.66
BBC3-202ENST00000341983 TOP2BQ02880 1626 aa37.93■■■■□ 3.66
BBC3-202ENST00000341983 SOGA1O94964 1423 aa37.89■■■■□ 3.66
BBC3-202ENST00000341983 EIF4G3O43432 1585 aaKnown RBP37.83■■■■□ 3.65
BBC3-202ENST00000341983 WDR97A6NE52 1622 aa37.79■■■■□ 3.64
BBC3-202ENST00000341983 AQRO60306 1485 aaKnown RBP eCLIP37.74■■■■□ 3.632e-8■■■□□ 18.9
BBC3-202ENST00000341983 TDRD9Q8NDG6 1382 aaKnown RBP37.68■■■■□ 3.62
BBC3-202ENST00000341983 ABCA10Q8WWZ4 1543 aa37.66■■■■□ 3.62
BBC3-202ENST00000341983 ABCA5Q8WWZ7 1642 aa37.56■■■■□ 3.6
BBC3-202ENST00000341983 PBRM1Q86U86 1689 aa37.48■■■■□ 3.59
BBC3-202ENST00000341983 GAPVD1Q14C86 1478 aa37.47■■■■□ 3.59
BBC3-202ENST00000341983 GRIN2BQ13224 1484 aa37.43■■■■□ 3.58
BBC3-202ENST00000341983 SNAPC4Q5SXM2 1469 aa37.4■■■■□ 3.58
BBC3-202ENST00000341983 DNAJC5Q9H3Z4 198 aa37.38■■■■□ 3.57
BBC3-202ENST00000341983 CHD1O14646 1710 aa37.35■■■■□ 3.57
BBC3-202ENST00000341983 MAGI1Q96QZ7 1491 aaPredicted RBP37.31■■■■□ 3.56
BBC3-202ENST00000341983 ERICH3Q5RHP9 1530 aa37.2■■■■□ 3.55
BBC3-202ENST00000341983 OSCARQ8IYS5 282 aa37.2■■■■□ 3.55
BBC3-202ENST00000341983 SYNJ2O15056 1496 aa37.18■■■■□ 3.54
BBC3-202ENST00000341983 ADAMTS12P58397 1594 aa37.17■■■■□ 3.54
BBC3-202ENST00000341983 FBLN2P98095 1184 aa37.15■■■■□ 3.54
BBC3-202ENST00000341983 TRIM41Q8WV44 630 aa37.15■■■■□ 3.54
BBC3-202ENST00000341983 KIF27Q86VH2 1401 aa37.14■■■■□ 3.54
BBC3-202ENST00000341983 CHMP7Q8WUX9 453 aaPredicted RBP37.07■■■■□ 3.53
BBC3-202ENST00000341983 FHAD1B1AJZ9 1412 aa37.03■■■■□ 3.52
BBC3-202ENST00000341983 IGF1RP08069 1367 aa37■■■■□ 3.51
BBC3-202ENST00000341983 RUSC2Q8N2Y8 1516 aa36.98■■■■□ 3.51
BBC3-202ENST00000341983 GRIN2AQ12879 1464 aa36.98■■■■□ 3.51
BBC3-202ENST00000341983 CUL7Q14999 1698 aa36.92■■■■□ 3.5
BBC3-202ENST00000341983 CLASP1Q7Z460 1538 aa36.91■■■■□ 3.5
BBC3-202ENST00000341983 CHIC1Q5VXU3 224 aa36.9■■■■□ 3.5
BBC3-202ENST00000341983 CEP170Q5SW79 1584 aa36.85■■■■□ 3.49
BBC3-202ENST00000341983 NUP160Q12769 1436 aa36.81■■■■□ 3.48
BBC3-202ENST00000341983 CARMIL1Q5VZK9 1371 aa36.76■■■■□ 3.47
BBC3-202ENST00000341983 RIMBP3CA6NJZ7 1639 aa36.72■■■■□ 3.47
BBC3-202ENST00000341983 RIMBP3BA6NNM3 1639 aa36.72■■■■□ 3.47
BBC3-202ENST00000341983 RIMBP3Q9UFD9 1639 aa36.72■■■■□ 3.47
BBC3-202ENST00000341983 ARHGEF11O15085 1522 aa36.7■■■■□ 3.47
BBC3-202ENST00000341983 RAPGEF2Q9Y4G8 1499 aa36.58■■■■□ 3.45
BBC3-202ENST00000341983 SHROOM2Q13796 1616 aa36.56■■■■□ 3.44
BBC3-202ENST00000341983 PRXQ9BXM0 1461 aa36.53■■■■□ 3.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms