RNA–Protein interactions for RNA: ENST00000482338.5

ERGIC3-214, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 598 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-214ENST00000482338 NISCHQ9Y2I1 1504 aa20.54■□□□□ 0.88
ERGIC3-214ENST00000482338 CCDC180Q9P1Z9 1646 aa18.13■□□□□ 0.49
ERGIC3-214ENST00000482338 ZCCHC6Q5VYS8 1495 aaKnown RBP17.24■□□□□ 0.35
ERGIC3-214ENST00000482338 ABCC9O60706 1549 aa17.15■□□□□ 0.34
ERGIC3-214ENST00000482338 DCAF1Q9Y4B6 1507 aa17.01■□□□□ 0.31
ERGIC3-214ENST00000482338 MYO15BQ96JP2 1530 aa16.86■□□□□ 0.29
ERGIC3-214ENST00000482338 DCAF8L2P0C7V8 631 aa16.85■□□□□ 0.29
ERGIC3-214ENST00000482338 NACADO15069 1562 aa16.83■□□□□ 0.28
ERGIC3-214ENST00000482338 RB1CC1Q8TDY2 1594 aa16.74■□□□□ 0.27
ERGIC3-214ENST00000482338 UNC13AQ9UPW8 1703 aa16.59■□□□□ 0.25
ERGIC3-214ENST00000482338 SCRIBQ14160 1630 aa16.58■□□□□ 0.24
ERGIC3-214ENST00000482338 SHROOM4Q9ULL8 1493 aa16.55■□□□□ 0.24
ERGIC3-214ENST00000482338 BICRAQ9NZM4 1560 aa16.27■□□□□ 0.2
ERGIC3-214ENST00000482338 PABPN1Q86U42 306 aaKnown RBP eCLIP16.05■□□□□ 0.16
ERGIC3-214ENST00000482338 CECR2Q9BXF3 1484 aa15.96■□□□□ 0.14
ERGIC3-214ENST00000482338 SMARCA4P51532 1647 aa15.9■□□□□ 0.14
ERGIC3-214ENST00000482338 BAZ1AQ9NRL2 1556 aaPredicted RBP15.89■□□□□ 0.13
ERGIC3-214ENST00000482338 MROH2BQ7Z745 1585 aa15.87■□□□□ 0.13
ERGIC3-214ENST00000482338 RSF1Q96T23 1441 aaPredicted RBP15.82■□□□□ 0.12
ERGIC3-214ENST00000482338 WIZO95785 1651 aa15.81■□□□□ 0.12
ERGIC3-214ENST00000482338 SUPT5HO00267 1087 aaKnown RBP15.78■□□□□ 0.12
ERGIC3-214ENST00000482338 EIF4G1Q04637 1599 aaKnown RBP15.76■□□□□ 0.11
ERGIC3-214ENST00000482338 PEG3Q9GZU2 1588 aa15.7■□□□□ 0.1
ERGIC3-214ENST00000482338 SMARCA2P51531 1590 aa15.62■□□□□ 0.09
ERGIC3-214ENST00000482338 CC2D2AQ9P2K1 1620 aa15.6■□□□□ 0.09
ERGIC3-214ENST00000482338 TOP2AP11388 1531 aaKnown RBP15.59■□□□□ 0.09
ERGIC3-214ENST00000482338 ATAD2BQ9ULI0 1458 aa15.59■□□□□ 0.09
ERGIC3-214ENST00000482338 HMGXB3Q12766 1538 aa15.52■□□□□ 0.07
ERGIC3-214ENST00000482338 BAZ1BQ9UIG0 1483 aaKnown RBP15.5■□□□□ 0.07
ERGIC3-214ENST00000482338 NCAPD3P42695 1498 aa15.46■□□□□ 0.07
ERGIC3-214ENST00000482338 CCDC88BA6NC98 1476 aa15.37■□□□□ 0.05
ERGIC3-214ENST00000482338 PRDM2Q13029 1718 aa15.26■□□□□ 0.03
ERGIC3-214ENST00000482338 DNAJC5BQ9UF47 199 aa15.2■□□□□ 0.02
ERGIC3-214ENST00000482338 CFTRP13569 1480 aa15.08■□□□□ 0.01
ERGIC3-214ENST00000482338 ABCC8Q09428 1581 aa15.06■□□□□ 0
ERGIC3-214ENST00000482338 LAMC3Q9Y6N6 1575 aa15.06■□□□□ 0
ERGIC3-214ENST00000482338 CHIC1Q5VXU3 224 aa15.03■□□□□ -0
ERGIC3-214ENST00000482338 NESP48681 1621 aa15.03■□□□□ -0
ERGIC3-214ENST00000482338 CADPSQ9ULU8 1353 aa15.02■□□□□ -0
ERGIC3-214ENST00000482338 KIF21AQ7Z4S6 1674 aa14.99□□□□□ -0.01
ERGIC3-214ENST00000482338 SYNJ1O43426 1573 aa14.94□□□□□ -0.02
ERGIC3-214ENST00000482338 BIVM-ERCC5R4GMW8 1640 aa14.94□□□□□ -0.02
ERGIC3-214ENST00000482338 FANCD2Q9BXW9 1451 aa14.91□□□□□ -0.02
ERGIC3-214ENST00000482338 WRNQ14191 1432 aaPredicted RBP eCLIP14.9□□□□□ -0.02
ERGIC3-214ENST00000482338 TOP2BQ02880 1626 aa14.89□□□□□ -0.03
ERGIC3-214ENST00000482338 CUX1P39880 1505 aa14.87□□□□□ -0.03
ERGIC3-214ENST00000482338 CEP164Q9UPV0 1460 aa14.85□□□□□ -0.03
ERGIC3-214ENST00000482338 TRIM41Q8WV44 630 aa14.84□□□□□ -0.03
ERGIC3-214ENST00000482338 PDS5BQ9NTI5 1447 aa14.83□□□□□ -0.03
ERGIC3-214ENST00000482338 DNMBPQ6XZF7 1577 aa14.81□□□□□ -0.04
ERGIC3-214ENST00000482338 URB2Q14146 1524 aaKnown RBP14.76□□□□□ -0.05
ERGIC3-214ENST00000482338 TOPBP1Q92547 1522 aa14.76□□□□□ -0.05
ERGIC3-214ENST00000482338 THOC2Q8NI27 1593 aaKnown RBP14.74□□□□□ -0.05
ERGIC3-214ENST00000482338 FGD5Q6ZNL6 1462 aa14.71□□□□□ -0.05
ERGIC3-214ENST00000482338 MRC2Q9UBG0 1479 aa14.71□□□□□ -0.05
ERGIC3-214ENST00000482338 WDR97A6NE52 1622 aa14.7□□□□□ -0.06
ERGIC3-214ENST00000482338 ERCC6Q03468 1493 aa14.7□□□□□ -0.06
ERGIC3-214ENST00000482338 WDR62O43379 1518 aa14.69□□□□□ -0.06
ERGIC3-214ENST00000482338 POLA1P09884 1462 aaPredicted RBP14.66□□□□□ -0.06
ERGIC3-214ENST00000482338 SOGA1O94964 1423 aa14.65□□□□□ -0.06
ERGIC3-214ENST00000482338 RUSC2Q8N2Y8 1516 aa14.64□□□□□ -0.07
ERGIC3-214ENST00000482338 TARBP1Q13395 1621 aaKnown RBP14.62□□□□□ -0.07
ERGIC3-214ENST00000482338 RAD54L2Q9Y4B4 1467 aa14.59□□□□□ -0.07
ERGIC3-214ENST00000482338 EEA1Q15075 1411 aa14.58□□□□□ -0.07
ERGIC3-214ENST00000482338 FAM9AQ8IZU1 332 aaPredicted RBP14.58□□□□□ -0.08
ERGIC3-214ENST00000482338 ABCA10Q8WWZ4 1543 aa14.56□□□□□ -0.08
ERGIC3-214ENST00000482338 CUX2O14529 1486 aa14.56□□□□□ -0.08
ERGIC3-214ENST00000482338 ABCA5Q8WWZ7 1642 aa14.55□□□□□ -0.08
ERGIC3-214ENST00000482338 PBRM1Q86U86 1689 aa14.55□□□□□ -0.08
ERGIC3-214ENST00000482338 KIF27Q86VH2 1401 aa14.52□□□□□ -0.08
ERGIC3-214ENST00000482338 KIF21BO75037 1637 aa14.52□□□□□ -0.09
ERGIC3-214ENST00000482338 IFT140Q96RY7 1462 aa14.48□□□□□ -0.09
ERGIC3-214ENST00000482338 EIF4G3O43432 1585 aaKnown RBP14.47□□□□□ -0.09
ERGIC3-214ENST00000482338 CUL7Q14999 1698 aa14.46□□□□□ -0.1
ERGIC3-214ENST00000482338 CSRNP3Q8WYN3 585 aa14.45□□□□□ -0.1
ERGIC3-214ENST00000482338 LOC105371045A0A1W2PR82 267 aa14.43□□□□□ -0.1
ERGIC3-214ENST00000482338 GAPVD1Q14C86 1478 aa14.43□□□□□ -0.1
ERGIC3-214ENST00000482338 ZNF608Q9ULD9 1512 aaPredicted RBP14.42□□□□□ -0.1
ERGIC3-214ENST00000482338 ERICH3Q5RHP9 1530 aa14.41□□□□□ -0.1
ERGIC3-214ENST00000482338 TDRD9Q8NDG6 1382 aaKnown RBP14.41□□□□□ -0.1
ERGIC3-214ENST00000482338 GOLGA3Q08378 1498 aa14.4□□□□□ -0.1
ERGIC3-214ENST00000482338 PRXQ9BXM0 1461 aa14.4□□□□□ -0.1
ERGIC3-214ENST00000482338 RAPGEF2Q9Y4G8 1499 aa14.38□□□□□ -0.11
ERGIC3-214ENST00000482338 IGF1RP08069 1367 aa14.38□□□□□ -0.11
ERGIC3-214ENST00000482338 EHMT2Q96KQ7 1210 aa14.38□□□□□ -0.11
ERGIC3-214ENST00000482338 AQRO60306 1485 aaKnown RBP eCLIP14.38□□□□□ -0.114e-7■■■□□ 16.8
ERGIC3-214ENST00000482338 ADAMTS12P58397 1594 aa14.36□□□□□ -0.11
ERGIC3-214ENST00000482338 CTTNBP2Q8WZ74 1663 aa14.36□□□□□ -0.11
ERGIC3-214ENST00000482338 GRIN2BQ13224 1484 aa14.34□□□□□ -0.11
ERGIC3-214ENST00000482338 CARMIL1Q5VZK9 1371 aa14.32□□□□□ -0.12
ERGIC3-214ENST00000482338 SNAPC4Q5SXM2 1469 aa14.29□□□□□ -0.12
ERGIC3-214ENST00000482338 TNIKQ9UKE5 1360 aa14.27□□□□□ -0.12
ERGIC3-214ENST00000482338 CHD1O14646 1710 aa14.26□□□□□ -0.13
ERGIC3-214ENST00000482338 MAGI1Q96QZ7 1491 aaPredicted RBP14.25□□□□□ -0.13
ERGIC3-214ENST00000482338 FHAD1B1AJZ9 1412 aa14.24□□□□□ -0.13
ERGIC3-214ENST00000482338 UBTFP17480 764 aaKnown RBP14.24□□□□□ -0.13
ERGIC3-214ENST00000482338 CEP162Q5TB80 1403 aa14.22□□□□□ -0.13
ERGIC3-214ENST00000482338 SYNJ2O15056 1496 aa14.19□□□□□ -0.14
ERGIC3-214ENST00000482338 GRIN2AQ12879 1464 aa14.19□□□□□ -0.14
ERGIC3-214ENST00000482338 CEP170Q5SW79 1584 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms