RNA–Protein interactions for RNA: ENST00000264638.8

CNTNAP1-201, Transcript of contactin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNTNAP1, Length 5,276 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP1-201ENST00000264638 DCAF8L2P0C7V8 631 aa23.26■■□□□ 1.31
CNTNAP1-201ENST00000264638 NISCHQ9Y2I1 1504 aa22.73■■□□□ 1.23
CNTNAP1-201ENST00000264638 SUPT5HO00267 1087 aaKnown RBP21.88■■□□□ 1.09
CNTNAP1-201ENST00000264638 SHROOM4Q9ULL8 1493 aa21.56■■□□□ 1.04
CNTNAP1-201ENST00000264638 PELP1Q8IZL8 1130 aaKnown RBP21.5■■□□□ 1.03
CNTNAP1-201ENST00000264638 EHMT2Q96KQ7 1210 aa20.91■□□□□ 0.94
CNTNAP1-201ENST00000264638 APLP2Q06481 763 aa20.88■□□□□ 0.93
CNTNAP1-201ENST00000264638 FAM9AQ8IZU1 332 aaPredicted RBP20.8■□□□□ 0.92
CNTNAP1-201ENST00000264638 MYT1Q01538 1121 aa20.78■□□□□ 0.92
CNTNAP1-201ENST00000264638 ERICH6Q7L0X2 663 aa20.51■□□□□ 0.87
CNTNAP1-201ENST00000264638 CENPBP07199 599 aaPredicted RBP20.49■□□□□ 0.87
CNTNAP1-201ENST00000264638 CCER1Q8TC90 406 aaPredicted RBP20.48■□□□□ 0.87
CNTNAP1-201ENST00000264638 TRIM41Q8WV44 630 aa20.41■□□□□ 0.86
CNTNAP1-201ENST00000264638 ZEB1P37275 1124 aaPredicted RBP20.27■□□□□ 0.84
CNTNAP1-201ENST00000264638 RANGAP1P46060 587 aaPredicted RBP20.19■□□□□ 0.82
CNTNAP1-201ENST00000264638 TTBK1Q5TCY1 1321 aaPredicted RBP20.18■□□□□ 0.82
CNTNAP1-201ENST00000264638 PCGF6Q9BYE7 350 aa20.16■□□□□ 0.82
CNTNAP1-201ENST00000264638 UBTFP17480 764 aaKnown RBP20.14■□□□□ 0.81
CNTNAP1-201ENST00000264638 ATP1B4Q9UN42 357 aaPredicted RBP20.12■□□□□ 0.81
CNTNAP1-201ENST00000264638 NEFLP07196 543 aa19.93■□□□□ 0.78
CNTNAP1-201ENST00000264638 ABCC9O60706 1549 aa19.64■□□□□ 0.73
CNTNAP1-201ENST00000264638 HRCP23327 699 aa19.61■□□□□ 0.73
CNTNAP1-201ENST00000264638 YTHDC1Q96MU7 727 aaKnown RBP19.61■□□□□ 0.73
CNTNAP1-201ENST00000264638 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.54■□□□□ 0.72
CNTNAP1-201ENST00000264638 HNRNPUL2Q1KMD3 747 aaKnown RBP19.54■□□□□ 0.72
CNTNAP1-201ENST00000264638 TRIM26Q12899 539 aaPredicted RBP19.46■□□□□ 0.71
CNTNAP1-201ENST00000264638 CHIC1Q5VXU3 224 aa19.46■□□□□ 0.71
CNTNAP1-201ENST00000264638 PABPN1Q86U42 306 aaKnown RBP eCLIP19.46■□□□□ 0.71
CNTNAP1-201ENST00000264638 MYT1LQ9UL68 1186 aa19.45■□□□□ 0.7
CNTNAP1-201ENST00000264638 PPARGC1BQ86YN6 1023 aaKnown RBP19.45■□□□□ 0.7
CNTNAP1-201ENST00000264638 DAXXQ9UER7 740 aaPredicted RBP19.43■□□□□ 0.7
CNTNAP1-201ENST00000264638 ITGAEP38570 1179 aa19.33■□□□□ 0.68
CNTNAP1-201ENST00000264638 LOC105371045A0A1W2PR82 267 aa19.29■□□□□ 0.68
CNTNAP1-201ENST00000264638 RTL5Q5HYW3 569 aaPredicted RBP19.18■□□□□ 0.66
CNTNAP1-201ENST00000264638 POLR3GLQ9BT43 218 aa19.06■□□□□ 0.64
CNTNAP1-201ENST00000264638 FAM50AQ14320 339 aaKnown RBP18.97■□□□□ 0.63
CNTNAP1-201ENST00000264638 ZNF316A6NFI3 1004 aaPredicted RBP18.95■□□□□ 0.62
CNTNAP1-201ENST00000264638 FBLN2P98095 1184 aa18.92■□□□□ 0.62
CNTNAP1-201ENST00000264638 TRIM52Q96A61 297 aa18.87■□□□□ 0.61
CNTNAP1-201ENST00000264638 DIEXFQ68CQ4 756 aaKnown RBP18.83■□□□□ 0.6
CNTNAP1-201ENST00000264638 SCRIBQ14160 1630 aa18.81■□□□□ 0.6
CNTNAP1-201ENST00000264638 SLC4A1APQ9BWU0 796 aaKnown RBP18.8■□□□□ 0.6
CNTNAP1-201ENST00000264638 CSRNP3Q8WYN3 585 aa18.79■□□□□ 0.6
CNTNAP1-201ENST00000264638 ZCCHC6Q5VYS8 1495 aaKnown RBP18.78■□□□□ 0.6
CNTNAP1-201ENST00000264638 CLSPNQ9HAW4 1339 aa18.73■□□□□ 0.59
CNTNAP1-201ENST00000264638 CNGB1Q14028 1251 aaPredicted RBP18.73■□□□□ 0.59
CNTNAP1-201ENST00000264638 CCDC180Q9P1Z9 1646 aa18.72■□□□□ 0.59
CNTNAP1-201ENST00000264638 GTF3C3Q9Y5Q9 886 aa18.67■□□□□ 0.58
CNTNAP1-201ENST00000264638 CDK11AQ9UQ88 783 aaPredicted RBP18.66■□□□□ 0.58
CNTNAP1-201ENST00000264638 NEUROD1Q13562 356 aa18.65■□□□□ 0.58
CNTNAP1-201ENST00000264638 P3H3Q8IVL6 736 aa18.62■□□□□ 0.57
CNTNAP1-201ENST00000264638 ZNF326Q5BKZ1 582 aaKnown RBP18.53■□□□□ 0.56
CNTNAP1-201ENST00000264638 ARID3CA6NKF2 412 aa18.5■□□□□ 0.55
CNTNAP1-201ENST00000264638 RB1CC1Q8TDY2 1594 aa18.5■□□□□ 0.55
CNTNAP1-201ENST00000264638 ACIN1Q9UKV3 1341 aaKnown RBP18.49■□□□□ 0.55
CNTNAP1-201ENST00000264638 BCANQ96GW7 911 aa18.48■□□□□ 0.55
CNTNAP1-201ENST00000264638 ZNF777Q9ULD5 760 aaPredicted RBP18.47■□□□□ 0.55
CNTNAP1-201ENST00000264638 NPM1P06748 294 aaKnown RBP eCLIP18.45■□□□□ 0.54
CNTNAP1-201ENST00000264638 ANP32CO43423 234 aa18.44■□□□□ 0.54
CNTNAP1-201ENST00000264638 GLIPR1L2Q4G1C9 344 aa18.4■□□□□ 0.54
CNTNAP1-201ENST00000264638 ESF1Q9H501 851 aaKnown RBP18.38■□□□□ 0.53
CNTNAP1-201ENST00000264638 ANP32AP39687 249 aaKnown RBP18.37■□□□□ 0.53
CNTNAP1-201ENST00000264638 SCAF1Q9H7N4 1312 aaKnown RBP18.34■□□□□ 0.53
CNTNAP1-201ENST00000264638 NACADO15069 1562 aa18.32■□□□□ 0.52
CNTNAP1-201ENST00000264638 EIF5BO60841 1220 aaKnown RBP18.31■□□□□ 0.52
CNTNAP1-201ENST00000264638 NEFMP07197 916 aa18.3■□□□□ 0.52
CNTNAP1-201ENST00000264638 ZBTB47Q9UFB7 747 aaPredicted RBP18.29■□□□□ 0.52
CNTNAP1-201ENST00000264638 CHMP7Q8WUX9 453 aaPredicted RBP18.27■□□□□ 0.51
CNTNAP1-201ENST00000264638 STAG3Q9UJ98 1225 aa18.2■□□□□ 0.5
CNTNAP1-201ENST00000264638 ANP32BQ92688 251 aaKnown RBP18.2■□□□□ 0.5
CNTNAP1-201ENST00000264638 TONSLQ96HA7 1378 aa18.18■□□□□ 0.5
CNTNAP1-201ENST00000264638 TSPY4P0CV99 314 aa18.17■□□□□ 0.5
CNTNAP1-201ENST00000264638 TSPY10P0CW01 314 aa18.17■□□□□ 0.5
CNTNAP1-201ENST00000264638 CHGAP10645 457 aaKnown RBP18.15■□□□□ 0.5
CNTNAP1-201ENST00000264638 RSF1Q96T23 1441 aaPredicted RBP18.14■□□□□ 0.5
CNTNAP1-201ENST00000264638 MTUS2Q5JR59 1369 aa18.14■□□□□ 0.49
CNTNAP1-201ENST00000264638 EEA1Q15075 1411 aa18.14■□□□□ 0.49
CNTNAP1-201ENST00000264638 BAZ1BQ9UIG0 1483 aaKnown RBP18.12■□□□□ 0.49
CNTNAP1-201ENST00000264638 CANXP27824 592 aaKnown RBP18.11■□□□□ 0.49
CNTNAP1-201ENST00000264638 SLC24A1O60721 1099 aa18.11■□□□□ 0.49
CNTNAP1-201ENST00000264638 DCAF1Q9Y4B6 1507 aa18.1■□□□□ 0.49
CNTNAP1-201ENST00000264638 CLIP1P30622 1438 aa18.07■□□□□ 0.48
CNTNAP1-201ENST00000264638 CHIC2Q9UKJ5 165 aa18.06■□□□□ 0.48
CNTNAP1-201ENST00000264638 NPM2Q86SE8 214 aaKnown RBP18.04■□□□□ 0.48
CNTNAP1-201ENST00000264638 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.03■□□□□ 0.48
CNTNAP1-201ENST00000264638 WRNQ14191 1432 aaPredicted RBP eCLIP18.03■□□□□ 0.48
CNTNAP1-201ENST00000264638 PLEKHD1A6NEE1 506 aa18■□□□□ 0.47
CNTNAP1-201ENST00000264638 FKBP8Q14318 412 aa17.99■□□□□ 0.47
CNTNAP1-201ENST00000264638 GOLGA3Q08378 1498 aa17.98■□□□□ 0.47
CNTNAP1-201ENST00000264638 KIF27Q86VH2 1401 aa17.98■□□□□ 0.47
CNTNAP1-201ENST00000264638 BAZ1AQ9NRL2 1556 aaPredicted RBP17.96■□□□□ 0.47
CNTNAP1-201ENST00000264638 PLPPR3Q6T4P5 718 aa17.95■□□□□ 0.46
CNTNAP1-201ENST00000264638 UPF2Q9HAU5 1272 aaKnown RBP17.94■□□□□ 0.46
CNTNAP1-201ENST00000264638 HSP90AA1P07900 732 aaKnown RBP17.9■□□□□ 0.46
CNTNAP1-201ENST00000264638 KCNH8Q96L42 1107 aa17.89■□□□□ 0.46
CNTNAP1-201ENST00000264638 ERCC6Q03468 1493 aa17.88■□□□□ 0.45
CNTNAP1-201ENST00000264638 CEP162Q5TB80 1403 aa17.84■□□□□ 0.45
CNTNAP1-201ENST00000264638 DDX10Q13206 875 aaKnown RBP17.84■□□□□ 0.45
CNTNAP1-201ENST00000264638 CEP164Q9UPV0 1460 aa17.84■□□□□ 0.45
CNTNAP1-201ENST00000264638 KDM2AQ9Y2K7 1162 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms