RNA–Protein interactions for RNA: ENST00000591662.1

CNTNAP1-204, Transcript of contactin associated protein 1, humanhuman

TSL 1 (best)

Gene CNTNAP1, Length 4,499 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP1-204ENST00000591662 NISCHQ9Y2I1 1504 aa18.88■□□□□ 0.61
CNTNAP1-204ENST00000591662 DCAF8L2P0C7V8 631 aa18.65■□□□□ 0.58
CNTNAP1-204ENST00000591662 SUPT5HO00267 1087 aaKnown RBP17.88■□□□□ 0.45
CNTNAP1-204ENST00000591662 PELP1Q8IZL8 1130 aaKnown RBP17.85■□□□□ 0.45
CNTNAP1-204ENST00000591662 SHROOM4Q9ULL8 1493 aa17.55■□□□□ 0.4
CNTNAP1-204ENST00000591662 MYT1Q01538 1121 aa17.53■□□□□ 0.4
CNTNAP1-204ENST00000591662 PCGF6Q9BYE7 350 aa17.53■□□□□ 0.4
CNTNAP1-204ENST00000591662 HRCP23327 699 aa17.47■□□□□ 0.39
CNTNAP1-204ENST00000591662 ZEB1P37275 1124 aaPredicted RBP17.4■□□□□ 0.38
CNTNAP1-204ENST00000591662 CENPBP07199 599 aaPredicted RBP17.15■□□□□ 0.34
CNTNAP1-204ENST00000591662 TRIM26Q12899 539 aaPredicted RBP16.99■□□□□ 0.31
CNTNAP1-204ENST00000591662 EHMT2Q96KQ7 1210 aa16.92■□□□□ 0.3
CNTNAP1-204ENST00000591662 CHIC1Q5VXU3 224 aa16.84■□□□□ 0.29
CNTNAP1-204ENST00000591662 PPARGC1BQ86YN6 1023 aaKnown RBP16.83■□□□□ 0.28
CNTNAP1-204ENST00000591662 CCER1Q8TC90 406 aaPredicted RBP16.76■□□□□ 0.27
CNTNAP1-204ENST00000591662 FAM9AQ8IZU1 332 aaPredicted RBP16.65■□□□□ 0.26
CNTNAP1-204ENST00000591662 TRIM41Q8WV44 630 aa16.65■□□□□ 0.26
CNTNAP1-204ENST00000591662 APLP2Q06481 763 aa16.63■□□□□ 0.25
CNTNAP1-204ENST00000591662 LOC105371045A0A1W2PR82 267 aa16.52■□□□□ 0.24
CNTNAP1-204ENST00000591662 YTHDC1Q96MU7 727 aaKnown RBP16.41■□□□□ 0.22
CNTNAP1-204ENST00000591662 DCAF1Q9Y4B6 1507 aa16.4■□□□□ 0.22
CNTNAP1-204ENST00000591662 DIEXFQ68CQ4 756 aaKnown RBP16.36■□□□□ 0.21
CNTNAP1-204ENST00000591662 ACIN1Q9UKV3 1341 aaKnown RBP16.34■□□□□ 0.21
CNTNAP1-204ENST00000591662 ERICH6Q7L0X2 663 aa16.34■□□□□ 0.21
CNTNAP1-204ENST00000591662 GTF3C3Q9Y5Q9 886 aa16.32■□□□□ 0.2
CNTNAP1-204ENST00000591662 TTBK1Q5TCY1 1321 aaPredicted RBP16.32■□□□□ 0.2
CNTNAP1-204ENST00000591662 RANGAP1P46060 587 aaPredicted RBP16.25■□□□□ 0.19
CNTNAP1-204ENST00000591662 NEFLP07196 543 aa16.24■□□□□ 0.19
CNTNAP1-204ENST00000591662 SCAF1Q9H7N4 1312 aaKnown RBP16.19■□□□□ 0.18
CNTNAP1-204ENST00000591662 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.16■□□□□ 0.18
CNTNAP1-204ENST00000591662 UBTFP17480 764 aaKnown RBP16.13■□□□□ 0.17
CNTNAP1-204ENST00000591662 ATP1B4Q9UN42 357 aaPredicted RBP16.1■□□□□ 0.17
CNTNAP1-204ENST00000591662 MYO15BQ96JP2 1530 aa16.01■□□□□ 0.15
CNTNAP1-204ENST00000591662 ZNF316A6NFI3 1004 aaPredicted RBP16■□□□□ 0.15
CNTNAP1-204ENST00000591662 CLSPNQ9HAW4 1339 aa16■□□□□ 0.15
CNTNAP1-204ENST00000591662 CCDC180Q9P1Z9 1646 aa15.99■□□□□ 0.15
CNTNAP1-204ENST00000591662 NEUROD1Q13562 356 aa15.98■□□□□ 0.15
CNTNAP1-204ENST00000591662 ZCCHC6Q5VYS8 1495 aaKnown RBP15.88■□□□□ 0.13
CNTNAP1-204ENST00000591662 HNRNPUL2Q1KMD3 747 aaKnown RBP15.85■□□□□ 0.13
CNTNAP1-204ENST00000591662 ABCC9O60706 1549 aa15.84■□□□□ 0.13
CNTNAP1-204ENST00000591662 PABPN1Q86U42 306 aaKnown RBP eCLIP15.6■□□□□ 0.09
CNTNAP1-204ENST00000591662 RTL5Q5HYW3 569 aaPredicted RBP15.6■□□□□ 0.09
CNTNAP1-204ENST00000591662 MYT1LQ9UL68 1186 aa15.58■□□□□ 0.08
CNTNAP1-204ENST00000591662 BCANQ96GW7 911 aa15.57■□□□□ 0.08
CNTNAP1-204ENST00000591662 CDK11AQ9UQ88 783 aaPredicted RBP15.57■□□□□ 0.08
CNTNAP1-204ENST00000591662 ITGAEP38570 1179 aa15.55■□□□□ 0.08
CNTNAP1-204ENST00000591662 ANP32EQ9BTT0 268 aa15.54■□□□□ 0.08
CNTNAP1-204ENST00000591662 MIER1Q8N108 512 aa15.52■□□□□ 0.07
CNTNAP1-204ENST00000591662 ANP32CO43423 234 aa15.47■□□□□ 0.07
CNTNAP1-204ENST00000591662 CSRNP3Q8WYN3 585 aa15.44■□□□□ 0.06
CNTNAP1-204ENST00000591662 DAXXQ9UER7 740 aaPredicted RBP15.44■□□□□ 0.06
CNTNAP1-204ENST00000591662 FKBP8Q14318 412 aa15.42■□□□□ 0.06
CNTNAP1-204ENST00000591662 SCRIBQ14160 1630 aa15.41■□□□□ 0.06
CNTNAP1-204ENST00000591662 POLR3GLQ9BT43 218 aa15.31■□□□□ 0.04
CNTNAP1-204ENST00000591662 BCL11AQ9H165 835 aa15.3■□□□□ 0.04
CNTNAP1-204ENST00000591662 SUPT16HQ9Y5B9 1047 aaKnown RBP15.29■□□□□ 0.04
CNTNAP1-204ENST00000591662 ANP32AP39687 249 aaKnown RBP15.26■□□□□ 0.03
CNTNAP1-204ENST00000591662 RSF1Q96T23 1441 aaPredicted RBP15.25■□□□□ 0.03
CNTNAP1-204ENST00000591662 EEA1Q15075 1411 aa15.22■□□□□ 0.03
CNTNAP1-204ENST00000591662 CEP162Q5TB80 1403 aa15.22■□□□□ 0.03
CNTNAP1-204ENST00000591662 FAM50AQ14320 339 aaKnown RBP15.19■□□□□ 0.02
CNTNAP1-204ENST00000591662 TNIKQ9UKE5 1360 aa15.17■□□□□ 0.02
CNTNAP1-204ENST00000591662 DDX10Q13206 875 aaKnown RBP15.15■□□□□ 0.02
CNTNAP1-204ENST00000591662 CNGB1Q14028 1251 aaPredicted RBP15.15■□□□□ 0.02
CNTNAP1-204ENST00000591662 RB1CC1Q8TDY2 1594 aa15.14■□□□□ 0.01
CNTNAP1-204ENST00000591662 HNRNPUQ00839 825 aaKnown RBP eCLIP15.1■□□□□ 0.01
CNTNAP1-204ENST00000591662 GOLGA3Q08378 1498 aa15.09■□□□□ 0.01
CNTNAP1-204ENST00000591662 FBLN2P98095 1184 aa15.09■□□□□ 0.01
CNTNAP1-204ENST00000591662 TSHZ2Q9NRE2 1034 aa15.08■□□□□ 0.01
CNTNAP1-204ENST00000591662 CLIP1P30622 1438 aa15.08■□□□□ 0
CNTNAP1-204ENST00000591662 TRIM52Q96A61 297 aa15.08■□□□□ 0
CNTNAP1-204ENST00000591662 ZBTB47Q9UFB7 747 aaPredicted RBP15.04■□□□□ -0
CNTNAP1-204ENST00000591662 TONSLQ96HA7 1378 aa15.02■□□□□ -0
CNTNAP1-204ENST00000591662 SLC4A1APQ9BWU0 796 aaKnown RBP15.02□□□□□ -0.01
CNTNAP1-204ENST00000591662 RBM19Q9Y4C8 960 aaKnown RBP15.01□□□□□ -0.01
CNTNAP1-204ENST00000591662 NBR1Q14596 966 aa14.99□□□□□ -0.01
CNTNAP1-204ENST00000591662 WRNQ14191 1432 aaPredicted RBP eCLIP14.96□□□□□ -0.01
CNTNAP1-204ENST00000591662 P3H3Q8IVL6 736 aa14.95□□□□□ -0.02
CNTNAP1-204ENST00000591662 EIF5BO60841 1220 aaKnown RBP14.95□□□□□ -0.02
CNTNAP1-204ENST00000591662 GLIPR1L2Q4G1C9 344 aa14.94□□□□□ -0.02
CNTNAP1-204ENST00000591662 CCDC136Q96JN2 1154 aa14.94□□□□□ -0.02
CNTNAP1-204ENST00000591662 CEP164Q9UPV0 1460 aa14.93□□□□□ -0.02
CNTNAP1-204ENST00000591662 CECR2Q9BXF3 1484 aa14.92□□□□□ -0.02
CNTNAP1-204ENST00000591662 CCER2I3L3R5 266 aa14.91□□□□□ -0.02
CNTNAP1-204ENST00000591662 PPP4R2Q9NY27 417 aa14.91□□□□□ -0.02
CNTNAP1-204ENST00000591662 NPM2Q86SE8 214 aaKnown RBP14.9□□□□□ -0.02
CNTNAP1-204ENST00000591662 NACADO15069 1562 aa14.9□□□□□ -0.02
CNTNAP1-204ENST00000591662 ERICH6BQ5W0A0 696 aa14.89□□□□□ -0.03
CNTNAP1-204ENST00000591662 ARID3CA6NKF2 412 aa14.87□□□□□ -0.03
CNTNAP1-204ENST00000591662 ZNF326Q5BKZ1 582 aaKnown RBP14.87□□□□□ -0.03
CNTNAP1-204ENST00000591662 TIMELESSQ9UNS1 1208 aa14.87□□□□□ -0.03
CNTNAP1-204ENST00000591662 FAM9BQ8IZU0 186 aa14.86□□□□□ -0.03
CNTNAP1-204ENST00000591662 NOP58Q9Y2X3 529 aaKnown RBP14.86□□□□□ -0.03
CNTNAP1-204ENST00000591662 DEKP35659 375 aaKnown RBP14.86□□□□□ -0.03
CNTNAP1-204ENST00000591662 IRX6P78412 446 aaPredicted RBP14.86□□□□□ -0.03
CNTNAP1-204ENST00000591662 MRS2Q9HD23 443 aa14.82□□□□□ -0.04
CNTNAP1-204ENST00000591662 VPS8Q8N3P4 1428 aa14.81□□□□□ -0.04
CNTNAP1-204ENST00000591662 PPM1GO15355 546 aaPredicted RBP14.79□□□□□ -0.04
CNTNAP1-204ENST00000591662 DDRGK1Q96HY6 314 aa14.78□□□□□ -0.04
CNTNAP1-204ENST00000591662 ZNF777Q9ULD5 760 aaPredicted RBP14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms