RNA–Protein interactions for RNA: ENST00000483176.2

CLTC-207, Transcript of clathrin heavy chain, humanhuman

TSL 3

Gene CLTC, Length 760 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-207ENST00000483176 CHIC1Q5VXU3 224 aa19.49■□□□□ 0.71
CLTC-207ENST00000483176 AEBP2Q6ZN18 517 aaPredicted RBP19.38■□□□□ 0.69
CLTC-207ENST00000483176 PHF23Q9BUL5 403 aaPredicted RBP17.21■□□□□ 0.35
CLTC-207ENST00000483176 SENP3Q9H4L4 574 aaPredicted RBP16.37■□□□□ 0.21
CLTC-207ENST00000483176 PLPPR3Q6T4P5 718 aa16.1■□□□□ 0.17
CLTC-207ENST00000483176 FOXD1Q16676 465 aa15.11■□□□□ 0.01
CLTC-207ENST00000483176 ADRA2BP18089 450 aa15.07■□□□□ 0
CLTC-207ENST00000483176 PPP6R1Q9UPN7 881 aa15□□□□□ -0.01
CLTC-207ENST00000483176 KCNA4P22459 653 aa14.59□□□□□ -0.07
CLTC-207ENST00000483176 PIAS4Q8N2W9 510 aaPredicted RBP14.4□□□□□ -0.1
CLTC-207ENST00000483176 EHMT2Q96KQ7 1210 aa14.28□□□□□ -0.12
CLTC-207ENST00000483176 PPP4R3CPQ6ZMV5 832 aa14.26□□□□□ -0.13
CLTC-207ENST00000483176 NCBP3Q53F19 620 aaKnown RBP14.07□□□□□ -0.16
CLTC-207ENST00000483176 SLC4A1APQ9BWU0 796 aaKnown RBP14□□□□□ -0.17
CLTC-207ENST00000483176 NPM3O75607 178 aaKnown RBP13.85□□□□□ -0.19
CLTC-207ENST00000483176 CSRNP3Q8WYN3 585 aa13.83□□□□□ -0.2
CLTC-207ENST00000483176 SCAF1Q9H7N4 1312 aaKnown RBP13.76□□□□□ -0.21
CLTC-207ENST00000483176 CNKSR2Q8WXI2 1034 aa13.73□□□□□ -0.21
CLTC-207ENST00000483176 MSH5O43196 834 aa13.71□□□□□ -0.21
CLTC-207ENST00000483176 MAPK8IP2Q13387 824 aaPredicted RBP13.47□□□□□ -0.25
CLTC-207ENST00000483176 ZBTB22O15209 634 aa13.42□□□□□ -0.26
CLTC-207ENST00000483176 DNAJC5BQ9UF47 199 aa13.34□□□□□ -0.27
CLTC-207ENST00000483176 RNF216Q9NWF9 866 aaPredicted RBP13.32□□□□□ -0.28
CLTC-207ENST00000483176 FOXD4L1Q9NU39 408 aa13.25□□□□□ -0.29
CLTC-207ENST00000483176 DMRT2Q9Y5R5 561 aa13.16□□□□□ -0.3
CLTC-207ENST00000483176 HOXD11P31277 338 aaPredicted RBP13.1□□□□□ -0.31
CLTC-207ENST00000483176 SLC4A2P04920 1241 aa12.93□□□□□ -0.34
CLTC-207ENST00000483176 MYCNP04198 464 aaPredicted RBP12.78□□□□□ -0.36
CLTC-207ENST00000483176 ATXN8OSP0DMR3 200 aa12.74□□□□□ -0.37
CLTC-207ENST00000483176 DCAF8L1A6NGE4 600 aa12.58□□□□□ -0.4
CLTC-207ENST00000483176 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.52□□□□□ -0.412e-7■■□□□ 13.1
CLTC-207ENST00000483176 FKBP8Q14318 412 aa12.47□□□□□ -0.41
CLTC-207ENST00000483176 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.42□□□□□ -0.42
CLTC-207ENST00000483176 HNRNPUL2Q1KMD3 747 aaKnown RBP12.42□□□□□ -0.42
CLTC-207ENST00000483176 SAMD1Q6SPF0 538 aaPredicted RBP12.4□□□□□ -0.42
CLTC-207ENST00000483176 ATF5Q9Y2D1 282 aaPredicted RBP12.39□□□□□ -0.43
CLTC-207ENST00000483176 AMER1Q5JTC6 1135 aaPredicted RBP12.38□□□□□ -0.43
CLTC-207ENST00000483176 RTN4Q9NQC3 1192 aaKnown RBP12.38□□□□□ -0.43
CLTC-207ENST00000483176 U3KPZ7 1027 aaPredicted RBP12.36□□□□□ -0.43
CLTC-207ENST00000483176 POTEDQ86YR6 584 aa12.24□□□□□ -0.45
CLTC-207ENST00000483176 APLP2Q06481 763 aa12.15□□□□□ -0.46
CLTC-207ENST00000483176 ZNF219Q9P2Y4 722 aaPredicted RBP12.15□□□□□ -0.46
CLTC-207ENST00000483176 SLC24A1O60721 1099 aa12.12□□□□□ -0.47
CLTC-207ENST00000483176 SPDYE4A6NLX3 237 aa11.92□□□□□ -0.5
CLTC-207ENST00000483176 FBXO3Q9UK99 471 aa11.89□□□□□ -0.51
CLTC-207ENST00000483176 TRHP20396 242 aaPredicted RBP11.88□□□□□ -0.51
CLTC-207ENST00000483176 MKRN4PQ13434 485 aaPredicted RBP11.88□□□□□ -0.51
CLTC-207ENST00000483176 FBLN2P98095 1184 aa11.86□□□□□ -0.51
CLTC-207ENST00000483176 SPINK5Q9NQ38 1064 aaPredicted RBP11.85□□□□□ -0.51
CLTC-207ENST00000483176 POLA2Q14181 598 aa11.82□□□□□ -0.52
CLTC-207ENST00000483176 RNF39Q9H2S5 420 aa11.81□□□□□ -0.52
CLTC-207ENST00000483176 CAPN15O75808 1086 aa11.78□□□□□ -0.52
CLTC-207ENST00000483176 PROM2Q8N271 834 aa11.77□□□□□ -0.53
CLTC-207ENST00000483176 C1QBPQ07021 282 aaKnown RBP11.71□□□□□ -0.53
CLTC-207ENST00000483176 VASPP50552 380 aaPredicted RBP11.69□□□□□ -0.54
CLTC-207ENST00000483176 ZBTB12Q9Y330 459 aaPredicted RBP11.65□□□□□ -0.54
CLTC-207ENST00000483176 ABCB7O75027 752 aa11.6□□□□□ -0.55
CLTC-207ENST00000483176 IFNLR1Q8IU57 520 aaPredicted RBP11.58□□□□□ -0.56
CLTC-207ENST00000483176 ZNF692Q9BU19 519 aaPredicted RBP11.45□□□□□ -0.58
CLTC-207ENST00000483176 DSG3P32926 999 aa11.44□□□□□ -0.58
CLTC-207ENST00000483176 PLCB2Q00722 1185 aa11.43□□□□□ -0.58
CLTC-207ENST00000483176 DCAF8L2P0C7V8 631 aa11.42□□□□□ -0.58
CLTC-207ENST00000483176 PKD2Q13563 968 aa11.41□□□□□ -0.58
CLTC-207ENST00000483176 KLHL34Q8N239 644 aa11.39□□□□□ -0.59
CLTC-207ENST00000483176 SPDYE2BA6NHP3 402 aa11.38□□□□□ -0.59
CLTC-207ENST00000483176 SPDYE6P0CI01 402 aa11.38□□□□□ -0.59
CLTC-207ENST00000483176 SPDYE2Q495Y8 402 aa11.38□□□□□ -0.59
CLTC-207ENST00000483176 STAG3Q9UJ98 1225 aa11.38□□□□□ -0.59
CLTC-207ENST00000483176 OSCARQ8IYS5 282 aa11.37□□□□□ -0.59
CLTC-207ENST00000483176 SPOCK2Q92563 424 aa11.36□□□□□ -0.59
CLTC-207ENST00000483176 SSUH2Q9Y2M2 353 aa11.34□□□□□ -0.59
CLTC-207ENST00000483176 PABPN1Q86U42 306 aaKnown RBP eCLIP11.3□□□□□ -0.6
CLTC-207ENST00000483176 PLCD3Q8N3E9 789 aa11.3□□□□□ -0.6
CLTC-207ENST00000483176 HAP1P54257 671 aaPredicted RBP11.27□□□□□ -0.61
CLTC-207ENST00000483176 MIER1Q8N108 512 aa11.26□□□□□ -0.61
CLTC-207ENST00000483176 ECM2O94769 699 aaPredicted RBP11.25□□□□□ -0.61
CLTC-207ENST00000483176 NISCHQ9Y2I1 1504 aa11.22□□□□□ -0.61
CLTC-207ENST00000483176 BBXQ8WY36 941 aaPredicted RBP11.16□□□□□ -0.62
CLTC-207ENST00000483176 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.16□□□□□ -0.62
CLTC-207ENST00000483176 PLEKHG5O94827 1062 aa11.15□□□□□ -0.62
CLTC-207ENST00000483176 ZBTB47Q9UFB7 747 aaPredicted RBP11.13□□□□□ -0.63
CLTC-207ENST00000483176 RGL2O15211 777 aa11.11□□□□□ -0.63
CLTC-207ENST00000483176 NPM1P06748 294 aaKnown RBP eCLIP11.11□□□□□ -0.63
CLTC-207ENST00000483176 VSIG10Q8N0Z9 540 aa11.11□□□□□ -0.63
CLTC-207ENST00000483176 CACNB1Q02641 598 aaPredicted RBP11.09□□□□□ -0.63
CLTC-207ENST00000483176 CIZ1Q9ULV3 898 aaPredicted RBP11.09□□□□□ -0.63
CLTC-207ENST00000483176 PAXIP1Q6ZW49 1069 aaPredicted RBP11.06□□□□□ -0.64
CLTC-207ENST00000483176 CFAP44Q96MT7 982 aa11.04□□□□□ -0.64
CLTC-207ENST00000483176 BCANQ96GW7 911 aa11.03□□□□□ -0.64
CLTC-207ENST00000483176 TRIM41Q8WV44 630 aa10.99□□□□□ -0.65
CLTC-207ENST00000483176 CHGAP10645 457 aaKnown RBP10.98□□□□□ -0.65
CLTC-207ENST00000483176 SPRYD3Q8NCJ5 442 aa10.98□□□□□ -0.65
CLTC-207ENST00000483176 KDM2AQ9Y2K7 1162 aa10.96□□□□□ -0.65
CLTC-207ENST00000483176 GSE1Q14687 1217 aa10.93□□□□□ -0.66
CLTC-207ENST00000483176 SPDYE1Q8NFV5 336 aaPredicted RBP10.92□□□□□ -0.66
CLTC-207ENST00000483176 RBM42Q9BTD8 480 aaKnown RBP10.89□□□□□ -0.67
CLTC-207ENST00000483176 TSHZ2Q9NRE2 1034 aa10.89□□□□□ -0.67
CLTC-207ENST00000483176 NUBP1P53384 320 aa10.88□□□□□ -0.67
CLTC-207ENST00000483176 AKT1S1Q96B36 256 aa10.88□□□□□ -0.67
CLTC-207ENST00000483176 DCAF8Q5TAQ9 597 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms